BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,829,919	T→C	D749G (GAC→GGC)	yicI ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,829,919	0	T	C	99.7%	997.9 / NA	308	D749G (GAC→GGC)	yicI	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (152/155); minor base A (1/0); total (153/155)
Fisher's exact test for biased strand distribution p-value = 4.97e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 310 total aligned reads displayed.

GGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCA  >  NC_000913/3829829‑3830008

ggCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCt                                                                                         <  2:2513945/93‑1 (MQ=255)

ggCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCt                                                                                         <  2:183326/93‑1 (MQ=255)

 gCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCtt                                                                                        <  1:2250169/93‑1 (MQ=255)

  cATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTg                                                                                       >  1:6265402/1‑93 (MQ=255)

   aTTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGc                                                                                      <  1:3588321/93‑1 (MQ=255)

   aTTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGc                                                                                      <  1:2878096/93‑1 (MQ=255)

   aTTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGc                                                                                      <  2:25830/93‑1 (MQ=255)

   aTTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGc                                                                                      >  2:4983828/1‑93 (MQ=255)

   aTTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGc                                                                                      <  2:5017146/93‑1 (MQ=255)

   aTTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGc                                                                                      >  1:513812/1‑93 (MQ=255)

    ttCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCa                                                                                     <  1:6078471/93‑1 (MQ=255)

     tCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAg                                                                                    >  1:497258/1‑93 (MQ=255)

       cATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGAc                                                                                  <  2:4224537/93‑1 (MQ=255)

        aTCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGAcc                                                                                 <  1:2606942/93‑1 (MQ=255)

         tCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCa                                                                                >  2:5410358/1‑93 (MQ=255)

         tCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCa                                                                                >  2:6114959/1‑93 (MQ=255)

          cAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCAt                                                                               <  1:1024193/93‑1 (MQ=255)

           aaTAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCAtt                                                                              >  1:5283840/1‑93 (MQ=255)

           aaTAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCAtt                                                                              <  1:6196237/93‑1 (MQ=255)

            aTAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCAttt                                                                             >  2:2763385/1‑93 (MQ=255)

            aTAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCAttt                                                                             >  1:1143653/1‑93 (MQ=255)

            aTAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCAttt                                                                             >  2:4005457/1‑93 (MQ=255)

             tAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTa                                                                            >  1:1463237/1‑93 (MQ=255)

             tAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTa                                                                            >  1:1954263/1‑93 (MQ=255)

             tAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTa                                                                            >  2:4826483/1‑93 (MQ=255)

              aGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTAc                                                                           <  1:796123/93‑1 (MQ=255)

                   aCAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTca                                                                      >  2:360219/1‑93 (MQ=255)

                     aaCGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTcaca                                                                    <  2:2927535/93‑1 (MQ=255)

                       cGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaac                                                                  <  2:1604469/93‑1 (MQ=255)

                       cGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaac                                                                  <  2:5544621/93‑1 (MQ=255)

                       cGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaac                                                                  >  2:3740627/1‑93 (MQ=255)

                       cGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaac                                                                  <  2:2305138/93‑1 (MQ=255)

                        gTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaaca                                                                 <  2:4735283/93‑1 (MQ=255)

                        gTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaaca                                                                 >  1:2915940/1‑93 (MQ=255)

                        gTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCacaaca                                                                 <  2:6171426/93‑1 (MQ=255)

                         tAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAt                                                                >  1:9058/1‑93 (MQ=255)

                          aaTTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAtt                                                               <  2:4489729/93‑1 (MQ=255)

                          aaTTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAtt                                                               <  2:6005037/93‑1 (MQ=255)

                          aaTTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACAtt                                                               >  1:3347082/1‑93 (MQ=255)

                           aTTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTg                                                              <  1:5953156/93‑1 (MQ=255)

                            ttGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTgc                                                             <  1:2468736/93‑1 (MQ=255)

                               tCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCa                                                          <  2:1551841/93‑1 (MQ=255)

                               tCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCa                                                          <  1:4256929/93‑1 (MQ=255)

                                    gcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcac                                                     <  2:298429/93‑1 (MQ=255)

                                    gcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcac                                                     >  1:3959064/1‑93 (MQ=255)

                                    gcATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcac                                                     >  2:343768/1‑93 (MQ=255)

                                     cATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcaca                                                    >  1:3699690/1‑93 (MQ=255)

                                     cATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGcaca                                                    >  1:977899/1‑93 (MQ=255)

                                      aTTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAg                                                   <  2:2177362/93‑1 (MQ=255)

                                       ttCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgt                                                  >  1:2411114/1‑93 (MQ=255)

                                       ttCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGACTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgt                                                  >  1:2314869/1‑93 (MQ=255)

                                        tCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgtg                                                 <  2:4114836/93‑1 (MQ=255)

                                         cccTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgtgt                                                <  2:1286200/93‑1 (MQ=255)

                                         cccTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAgtgt                                                >  2:2386067/1‑93 (MQ=255)

                                            ttGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCa                                             <  2:3245988/93‑1 (MQ=255)

                                            ttGAGGCCTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCa                                             <  2:3197735/93‑1 (MQ=255)

                                             tGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAg                                            <  1:547417/93‑1 (MQ=255)

                                                ggCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttc                                         >  2:4544508/1‑93 (MQ=255)

                                                ggCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttc                                         >  1:1622429/1‑93 (MQ=255)

                                                  cTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttctt                                       >  1:4711996/1‑93 (MQ=255)

                                                  cTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttctt                                       <  2:4153123/93‑1 (MQ=255)

                                                  cTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttctt                                       <  1:3108757/93‑1 (MQ=255)

                                                  cTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttctt                                       <  2:5200641/93‑1 (MQ=255)

                                                   ttCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttcttc                                      >  2:382799/1‑93 (MQ=255)

                                                   ttCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttcttc                                      >  1:3881918/1‑93 (MQ=255)

                                                   ttCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGttcttc                                      <  2:1199324/93‑1 (MQ=255)

                                                    tCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcg                                     <  2:2450135/93‑1 (MQ=255)

                                                    tCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcg                                     >  2:404873/1‑93 (MQ=255)

                                                       ccaccaGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcct                                  <  2:361428/93‑1 (MQ=255)

                                                         accaGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcctcg                                >  1:4785294/1‑93 (MQ=255)

                                                         accaGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcctcg                                >  2:5076485/1‑93 (MQ=255)

                                                           caGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTtcgcctcgcc                              <  2:3804639/93‑1 (MQ=255)

                                                            aGCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGccc                             >  1:2184784/1‑93 (MQ=255)

                                                             gCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCg                            >  1:5656220/1‑93 (MQ=255)

                                                             gCCCCTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCATCGCCCg                            >  1:2816386/1‑93 (MQ=255)

                                                               cccTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCa                          <  2:846663/93‑1 (MQ=255)

                                                               cccTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCa                          >  2:3635099/1‑93 (MQ=255)

                                                                ccTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCgcacgcac                         >  2:705610/1‑93 (MQ=255)

                                                                 cTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCAcc                        >  1:167430/1‑93 (MQ=255)

                                                                 cTGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCAcc                        >  2:5792409/1‑93 (MQ=255)

                                                                  tGCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCa                       >  2:5617683/1‑93 (MQ=255)

                                                                   gCTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAg                      >  2:359565/1‑93 (MQ=255)

                                                                    cTCACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGt                     <  1:3041971/93‑1 (MQ=255)

                                                                      cACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTca                   <  1:4039203/93‑1 (MQ=255)

                                                                      cACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTca                   <  2:5901281/93‑1 (MQ=255)

                                                                      cACTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTca                   >  2:3904364/1‑93 (MQ=255)

                                                                       aCTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTcac                  >  1:1802844/1‑93 (MQ=255)

                                                                       aCTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGCCCAGTTCTTCGCCTCGCCCGCACCAGTcac                  >  2:1887732/1‑93 (MQ=255)

                                                                        cTTTCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACGTTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTcaca                 <  2:5461011/93‑1 (MQ=255)

                                                                         tttCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAg                >  1:2515399/1‑93 (MQ=255)

                                                                           tCAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTa              >  1:1311679/1‑93 (MQ=255)

                                                                            cAGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTaa             >  1:2752472/1‑93 (MQ=255)

                                                                             aGCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAAt            <  2:1412685/93‑1 (MQ=255)

                                                                              gCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATc           >  1:2382689/1‑93 (MQ=255)

                                                                              gCCTGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATc           <  2:4311020/93‑1 (MQ=255)

                                                                                 tGCGAACCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCgtg        >  1:5425187/1‑93 (MQ=255)

                                                                                     aaCCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGc    >  2:3869190/1‑93 (MQ=255)

                                                                                     aaCCGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGc    >  1:5069205/1‑93 (MQ=255)

                                                                                       ccGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCa  >  1:1697179/1‑93 (MQ=255)

                                                                                       ccGCCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCa  <  1:5008487/93‑1 (MQ=255)

GGCATTCCATCAATAGATTACAACGTAATTGTCAGCGCATTCCCTTGAGGCTTCACCACCAGCCCCTGCTCACTTTCAGCCTGCGAACCGTCTTGCAGACCATTTACTTTCACAACATTGCGCAGGCACAGTGTCCAGTTCTTCGCCTCGCCCGCACCAGTCACAGTAATCGTGTTGCCA  >  NC_000913/3829829‑3830008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`