BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,837,057	G→A	L188L (CTC→CTT)	nlpA ←	lipoprotein‑28

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,837,057	0	G	A	100.0%	913.4 / NA	245	L188L (CTC→CTT)	nlpA	lipoprotein‑28
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (118/127); total (118/127)

Only 100 of 247 total aligned reads displayed.

GCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT  >  NC_000913/3836967‑3837146

gCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAg                                                                                         <  1:4767784/93‑1 (MQ=255)

 cTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGc                                                                                        <  2:580782/93‑1 (MQ=255)

 cTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGc                                                                                        >  2:5980176/1‑93 (MQ=255)

 cTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGc                                                                                        <  2:1360466/93‑1 (MQ=255)

  tGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCt                                                                                       >  1:100144/1‑93 (MQ=255)

   gTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTg                                                                                      >  2:1018424/1‑93 (MQ=255)

   gTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTg                                                                                      >  2:391884/1‑93 (MQ=255)

    tCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTgc                                                                                     >  1:5263205/1‑93 (MQ=255)

     cGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTgcg                                                                                    >  1:1357019/1‑93 (MQ=255)

          aCCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGccccc                                                                               >  2:5716920/1‑93 (MQ=255)

          aCCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGccccc                                                                               >  1:2472555/1‑93 (MQ=255)

          aCCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGccccc                                                                               >  1:1883773/1‑93 (MQ=255)

           ccGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCt                                                                              >  1:3927006/1‑93 (MQ=255)

            cGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTc                                                                             <  1:303559/93‑1 (MQ=255)

              gagaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGa                                                                           <  1:1929831/93‑1 (MQ=255)

               agaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAg                                                                          <  2:4784587/93‑1 (MQ=255)

               agaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAg                                                                          >  2:3141324/1‑93 (MQ=255)

               agaAAGCACGGTCTGCTGAAGGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAg                                                                          <  1:104757/93‑1 (MQ=255)

                gaAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGt                                                                         <  1:4057444/93‑1 (MQ=255)

                 aaaGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGtt                                                                        <  2:4666872/93‑1 (MQ=255)

                    gCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCa                                                                     >  1:3822607/1‑93 (MQ=255)

                     cccGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCAt                                                                    <  2:3313504/93‑1 (MQ=255)

                      ccGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATa                                                                   <  1:420266/93‑1 (MQ=255)

                         gTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATc                                                                <  2:6288341/93‑1 (MQ=255)

                           ctgctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTg                                                              <  1:5426172/93‑1 (MQ=255)

                            tgctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGc                                                             >  2:2486680/1‑93 (MQ=255)

                             gctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCa                                                            >  1:4647385/1‑93 (MQ=255)

                              ctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaa                                                           >  1:5783729/1‑93 (MQ=255)

                              ctgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaa                                                           >  1:781698/1‑93 (MQ=255)

                               tgAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCaaa                                                          >  1:4147994/1‑93 (MQ=255)

                                gAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAAt                                                         <  2:3489884/93‑1 (MQ=255)

                                 aaTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATg                                                        <  2:1434396/93‑1 (MQ=255)

                                  aTGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGa                                                       <  1:5195121/93‑1 (MQ=255)

                                   tGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAc                                                      <  1:4881661/93‑1 (MQ=255)

                                   tGTAAGTGGTACTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGAc                                                      <  1:3518613/93‑1 (MQ=255)

                                    gTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACg                                                     >  1:1763617/1‑93 (MQ=255)

                                    gTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACg                                                     >  2:2626356/1‑93 (MQ=255)

                                     tAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGa                                                    >  1:5450605/1‑93 (MQ=255)

                                       aGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAgg                                                  >  1:6192471/1‑93 (MQ=255)

                                        gtggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGa                                                 >  2:3614867/1‑93 (MQ=255)

                                        gtggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGa                                                 <  2:4520474/93‑1 (MQ=255)

                                          ggtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGAtt                                               <  2:2101279/93‑1 (MQ=255)

                                           gtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTa                                              >  1:5001232/1‑93 (MQ=255)

                                           gtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTa                                              <  2:456783/93‑1 (MQ=255)

                                           gtgCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTa                                              >  1:4852692/1‑93 (MQ=255)

                                             tcTGATAATCGCTACATCAACTTTGGGATCATCCAGTGCGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATc                                            <  1:5614191/92‑1 (MQ=255)

                                             gCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATc                                            <  2:3252101/93‑1 (MQ=255)

                                             gCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATc                                            >  1:3232740/1‑93 (MQ=255)

                                              cTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCg                                           <  2:5093720/93‑1 (MQ=255)

                                               tGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCgg                                          >  2:464597/1‑93 (MQ=255)

                                                 aTAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGtt                                        >  1:1204308/1‑93 (MQ=255)

                                                 aTAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGtt                                        <  2:482342/93‑1 (MQ=255)

                                                  tAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTta                                       <  2:3361399/93‑1 (MQ=255)

                                                    aTCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTtata                                     <  1:2936167/93‑1 (MQ=255)

                                                     tCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTatat                                    >  1:3049062/1‑93 (MQ=255)

                                                     tCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTACGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTatat                                    >  1:4429640/1‑93 (MQ=255)

                                                      cGCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATc                                   >  2:5932150/1‑93 (MQ=255)

                                                       gCTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGGTCCATAATCTGCAAATGACGAGGATTATCGGTTATATcc                                  >  1:3360155/1‑93 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 >  1:2844159/1‑93 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 <  1:3672588/93‑1 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 <  2:4337940/93‑1 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 >  1:302662/1‑93 (MQ=255)

                                                        cTACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCa                                 <  1:5958570/93‑1 (MQ=255)

                                                         tACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAg                                <  2:2843789/93‑1 (MQ=255)

                                                         tACATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAg                                <  1:1114409/93‑1 (MQ=255)

                                                           cATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgcg                              >  2:2158209/1‑93 (MQ=255)

                                                           cATCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAgcg                              >  2:4932806/1‑93 (MQ=255)

                                                             tCAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGcgcg                            <  2:3173711/93‑1 (MQ=255)

                                                              cAACTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCgg                           <  1:4407439/93‑1 (MQ=255)

                                                               aaCTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggt                          >  1:6214491/1‑93 (MQ=255)

                                                               aaCTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggt                          <  2:1564509/93‑1 (MQ=255)

                                                               aaCTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCgga                          >  2:776025/1‑92 (MQ=255)

                                                                 cTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtag                        >  2:838684/1‑93 (MQ=255)

                                                                 cTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtag                        <  1:5100950/93‑1 (MQ=255)

                                                                 cTTTGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtag                        >  2:1735486/1‑93 (MQ=255)

                                                                  tttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtagg                       >  2:3600093/1‑93 (MQ=255)

                                                                  tttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtagg                       <  1:4508518/93‑1 (MQ=255)

                                                                   ttGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATGTCCAGCGCggtaggt                      <  2:1060011/93‑1 (MQ=255)

                                                                    tGGGATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCggtaggta                     <  2:523289/93‑1 (MQ=255)

                                                                     gggATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaa                    <  2:3786428/93‑1 (MQ=255)

                                                                     gggATCATCCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaa                    >  2:2662512/1‑93 (MQ=255)

                                                                        atcatcCAGTACGCGCGTAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGtaataa                 <  1:6278917/93‑1 (MQ=255)

                                                                         tcatcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAc                >  1:3155920/1‑93 (MQ=255)

                                                                         tcatcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAc                <  2:5546131/93‑1 (MQ=255)

                                                                           atcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAccc              >  2:5596044/1‑93 (MQ=255)

                                                                           atcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAAccc              <  2:6016124/93‑1 (MQ=255)

                                                                            tcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCt             >  2:4352540/1‑93 (MQ=255)

                                                                            tcCAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCt             >  1:4334151/1‑93 (MQ=255)

                                                                             ccAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtt            <  2:5402474/93‑1 (MQ=255)

                                                                              cAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCttt           >  1:2255602/1‑93 (MQ=255)

                                                                              cAGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCttt           <  1:830622/93‑1 (MQ=255)

                                                                               aGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtttt          <  1:1863664/93‑1 (MQ=255)

                                                                               aGTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCtttt          >  1:4223815/1‑93 (MQ=255)

                                                                                gTACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTc         >  1:2112415/1‑93 (MQ=255)

                                                                                 tACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        <  1:2700124/93‑1 (MQ=255)

                                                                                 tACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        >  1:3739963/1‑93 (MQ=255)

                                                                                 tACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        <  1:4374509/93‑1 (MQ=255)

                                                                                 tACGCGCGGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTcc        >  2:2395875/1‑93 (MQ=255)

                                                                                     cgcgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCctct    <  2:6067418/93‑1 (MQ=255)

                                                                                       cgGAAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCttt  >  1:6095265/1‑93 (MQ=255)

GCTGTCGTGCACCGGAGAAAGCCCGGTCTGCTGAATGTAAGTGGTGCTGATAATCGCTACATCAACTTTGGGATCATCCAGTACGCGCGGGAGCTGCGCCCCCTCGAGTTCCATAATCTGCAAATGACGAGGATTATCGGTTATATCCAGCGCGGTAGGTAATAACCCTTTTCCCTCTTT  >  NC_000913/3836967‑3837146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`