BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,838,693	A→G	I280T (ATC→ACC)	yicM ←	putative transport protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,838,693	0	A	G	100.0%	962.8 / NA	297	I280T (ATC→ACC)	yicM	putative transport protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/183); total (114/183)

Only 100 of 304 total aligned reads displayed.

GTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGC  >  NC_000913/3838603‑3838782

gTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTg                                                                                         <  1:3126179/93‑1 (MQ=255)

     gCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACGTGAAGGTGGCGat                                                                                    <  2:6306114/93‑1 (MQ=255)

         tCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGatcatc                                                                                >  1:1763717/1‑93 (MQ=255)

          ccACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATcc                                                                               <  2:2328101/93‑1 (MQ=255)

           cACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATccc                                                                              <  2:1765480/93‑1 (MQ=255)

               ccGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGcc                                                                          >  2:4404436/1‑93 (MQ=255)

               ccGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGcc                                                                          <  2:1066817/93‑1 (MQ=255)

                cGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCa                                                                         <  1:6136364/93‑1 (MQ=255)

                cGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCa                                                                         <  2:905159/93‑1 (MQ=255)

                 gAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCAt                                                                        <  2:4599420/93‑1 (MQ=255)

                 gAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCAt                                                                        <  1:213610/93‑1 (MQ=255)

                  aaTCCCGCCAGGCTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGACAGACATGAAGGCGGCGATCATCCCTGCCATc                                                                       >  2:1883275/1‑93 (MQ=255)

                       cGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAcc                                                                  <  1:1115351/93‑1 (MQ=255)

                       cGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAcc                                                                  <  2:2067253/93‑1 (MQ=255)

                        gCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAccc                                                                 <  2:5077312/93‑1 (MQ=255)

                        gCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAccc                                                                 >  2:3917013/1‑93 (MQ=255)

                        gCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACAccc                                                                 >  1:2578482/1‑93 (MQ=255)

                         ccAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCg                                                                >  1:990970/1‑93 (MQ=255)

                         ccAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCg                                                                <  2:1739834/93‑1 (MQ=255)

                          cAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCgg                                                               >  2:3379946/1‑93 (MQ=255)

                           aGGTTCATATACGCCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCCAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGa                                                              <  1:4444759/93‑1 (MQ=255)

                           aGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGa                                                              <  2:5499723/93‑1 (MQ=255)

                           aGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGa                                                              <  1:5268822/93‑1 (MQ=255)

                           aGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGa                                                              <  2:315689/93‑1 (MQ=255)

                           aGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGa                                                              >  2:3091877/1‑93 (MQ=255)

                              ttCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGt                                                           <  2:36745/93‑1 (MQ=255)

                              ttCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGt                                                           <  2:1496393/93‑1 (MQ=255)

                              ttCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGt                                                           >  1:5497395/1‑93 (MQ=255)

                               tCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGtt                                                          <  1:212024/93‑1 (MQ=255)

                               tCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCAGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGtt                                                          <  1:3612823/93‑1 (MQ=255)

                                cATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTg                                                         <  1:5412524/93‑1 (MQ=255)

                                 atatACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGt                                                        >  2:1271899/1‑93 (MQ=255)

                                 atatACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGt                                                        <  2:2192447/93‑1 (MQ=255)

                                 atatACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGt                                                        <  2:5166194/93‑1 (MQ=255)

                                  tataCACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGta                                                       <  1:5610797/93‑1 (MQ=255)

                                  tataCACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGta                                                       <  1:5823398/93‑1 (MQ=255)

                                   ataCACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaa                                                      <  2:4959253/93‑1 (MQ=255)

                                   ataCACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaa                                                      <  1:3897524/93‑1 (MQ=255)

                                    taCACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaat                                                     >  2:2814515/1‑93 (MQ=255)

                                    taCACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaat                                                     <  2:1334557/93‑1 (MQ=255)

                                      cacCGGGCGAATATACGTGAAGAAAGCAACCTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaataa                                                   <  1:1375156/93‑1 (MQ=255)

                                      cacCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGtaataa                                                   <  2:5883665/93‑1 (MQ=255)

                                      cacCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGGTGtaataa                                                   >  1:2179877/1‑93 (MQ=255)

                                       cccGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAg                                                  <  1:1620131/92‑1 (MQ=255)

                                        ccGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGc                                                 <  2:1035414/93‑1 (MQ=255)

                                          gggCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCgg                                               >  2:3557708/1‑93 (MQ=255)

                                           ggCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGa                                              <  1:4671211/93‑1 (MQ=255)

                                           ggCGAATATACGCGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGa                                              >  2:57443/1‑93 (MQ=255)

                                              gAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAg                                           <  2:6009264/93‑1 (MQ=255)

                                               aaTATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGCAAGt                                          >  2:3823821/1‑93 (MQ=255)

                                               aaTATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGt                                          >  1:1036163/1‑93 (MQ=255)

                                                atatACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTa                                         >  1:3575160/1‑93 (MQ=255)

                                                 tataCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAt                                        >  1:3734462/1‑93 (MQ=255)

                                                  ataCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtt                                       <  2:262482/93‑1 (MQ=255)

                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      >  2:6232216/1‑93 (MQ=255)

                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      >  1:2546519/1‑93 (MQ=255)

                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      <  1:2463244/93‑1 (MQ=255)

                                                   taCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAttt                                      >  2:5819925/1‑93 (MQ=255)

                                                    aCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtttt                                     <  1:66585/93‑1 (MQ=255)

                                                    aCGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtttt                                     <  2:4804411/93‑1 (MQ=255)

                                                    aCGAGAAGAAAGCAAACTTCCCGGCGAAAGACATGAAGGTGGCTATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTAtttt                                     <  1:199397/93‑1 (MQ=255)

                                                     cGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTg                                    <  2:1516796/93‑1 (MQ=255)

                                                     cGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTg                                    >  2:381119/1‑93 (MQ=255)

                                                      gTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGt                                   >  1:633851/1‑93 (MQ=255)

                                                       tGNAGAAAGCAAACTGCCCGGCNAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGtt                                  <  1:4996708/93‑1 (MQ=255)

                                                         aagaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTc                                <  1:5952422/93‑1 (MQ=255)

                                                         aagaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTc                                <  1:4027367/93‑1 (MQ=255)

                                                         aagaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTc                                <  1:1838008/93‑1 (MQ=255)

                                                          agaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCt                               <  2:4113920/93‑1 (MQ=255)

                                                           gaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTg                              <  1:4061441/93‑1 (MQ=255)

                                                           gaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTg                              <  1:1727535/93‑1 (MQ=255)

                                                           gaaAGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTg                              <  2:6040115/93‑1 (MQ=255)

                                                             aaGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGAt                            >  1:2699481/1‑93 (MQ=255)

                                                              aGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATg                           <  2:5281873/93‑1 (MQ=255)

                                                              aGCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTCTTTCTGATg                           >  2:2556389/1‑93 (MQ=255)

                                                               gCAAACTGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGc                          <  1:4751211/93‑1 (MQ=255)

                                                                     tGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGt                    >  1:1452969/1‑93 (MQ=255)

                                                                     tGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGt                    <  1:1071462/93‑1 (MQ=255)

                                                                     tGCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGt                    <  1:3346004/93‑1 (MQ=255)

                                                                      gCCCGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGtt                   <  2:1959908/93‑1 (MQ=255)

                                                                         cGGCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGc                <  1:6171810/93‑1 (MQ=255)

                                                                          ggCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGcc               <  2:3215584/93‑1 (MQ=255)

                                                                          ggCGAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGcc               >  1:4838360/1‑93 (MQ=255)

                                                                             gAAAGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTgg            <  1:3286596/93‑1 (MQ=255)

                                                                              aaaGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGc           >  2:4222248/1‑93 (MQ=255)

                                                                              aaaGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGc           >  1:3505558/1‑93 (MQ=255)

                                                                              aaaGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGc           >  1:6275045/1‑93 (MQ=255)

                                                                               aaGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCa          <  1:4048376/93‑1 (MQ=255)

                                                                               aaGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCa          >  1:4393171/1‑93 (MQ=255)

                                                                                aGACATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAg         <  2:3292217/93‑1 (MQ=255)

                                                                                  aCATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTg       <  2:54714/93‑1 (MQ=255)

                                                                                  aCATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTg       <  2:2926659/93‑1 (MQ=255)

                                                                                   cATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGa      >  1:2911644/1‑93 (MQ=255)

                                                                                   cATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGa      >  2:1177841/1‑93 (MQ=255)

                                                                                   cATGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGGTGTAATAAGCGGAAAGTATTTTGGTTCTGATGCGAGGGGTCGCCTGGCCGTGa      >  2:65187/1‑93 (MQ=255)

                                                                                    aTGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGaa     <  1:5070800/93‑1 (MQ=255)

                                                                                     tGAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAg    <  2:4069592/93‑1 (MQ=255)

                                                                                      gAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAgg   <  1:4601229/93‑1 (MQ=255)

                                                                                      gAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAgg   <  1:4159417/93‑1 (MQ=255)

                                                                                      gAAGGTGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAgg   >  1:766587/1‑93 (MQ=255)

GTTAAGCCATCCACGCCGAATCCCGCCAGGTTCATATACACCGGGCGAATATACGTGAAGAAAGCAAACTGCCCGGCGAAAGACATGAAGATGGCGATCATCCCTGCCATCACACCCGGACGTTGTAATAAGCGGAAAGTATTTTGTTTCTGATGCGAGGGTTCGCCTGGCAGTGAAGGC  >  NC_000913/3838603‑3838782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`