BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,845,193	G→A	T354T (ACC→ACT)	uhpC ←	UhpC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,845,193	0	G	A	100.0%	857.4 / NA	231	T354T (ACC→ACT)	uhpC	UhpC
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (128/103); total (128/103)

Only 100 of 232 total aligned reads displayed.

CCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAA  >  NC_000913/3845103‑3845281

ccccGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGCTTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGt                                                                                        <  1:6235015/93‑1 (MQ=255)

ccccGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGt                                                                                        <  1:4312052/93‑1 (MQ=255)

 cccGTAGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTg                                                                                       >  2:4102986/1‑93 (MQ=255)

  ccGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTga                                                                                      <  2:5202432/93‑1 (MQ=255)

  ccGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTga                                                                                      >  1:6109671/1‑93 (MQ=255)

   cGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTgaa                                                                                     <  1:14643/93‑1 (MQ=255)

    gTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTgaag                                                                                    >  1:4295125/1‑93 (MQ=255)

       gccgccCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGaagaag                                                                                 >  1:544177/1‑93 (MQ=255)

         cgccCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCa                                                                               <  2:5384803/93‑1 (MQ=255)

          cccccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAg                                                                              <  2:5897711/92‑1 (MQ=255)

           ccccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAgg                                                                             >  1:2824667/1‑93 (MQ=255)

            cccTGCTGCCTCTTTGTGGTAACACCCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGt                                                                            <  2:1904083/93‑1 (MQ=255)

            cccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGt                                                                            >  2:6167875/1‑93 (MQ=255)

            cccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGt                                                                            >  1:4647157/1‑93 (MQ=255)

            cccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGt                                                                            <  1:5802395/93‑1 (MQ=255)

             ccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGtt                                                                           >  2:3745288/1‑93 (MQ=255)

             ccTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGtt                                                                           <  2:4305474/93‑1 (MQ=255)

              cTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTg                                                                          >  1:3961072/1‑93 (MQ=255)

              cTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTg                                                                          >  1:553919/1‑93 (MQ=255)

               tGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGc                                                                         >  1:9425/1‑93 (MQ=255)

               tGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGc                                                                         >  2:4943439/1‑93 (MQ=255)

               tGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGc                                                                         >  2:291557/1‑93 (MQ=255)

                gccgccTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGcc                                                                        >  1:3489891/1‑93 (MQ=255)

                 ccgccTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCt                                                                       <  1:5670157/93‑1 (MQ=255)

                 ccgccTCTTTGTGAGAACACTCAGCCGCCGCCATACCGATTAACATCTGTGGGCAAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCt                                                                       <  2:3317473/93‑1 (MQ=255)

                  cgccTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTg                                                                      <  1:3802676/93‑1 (MQ=255)

                  cgccTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTg                                                                      <  1:491784/93‑1 (MQ=255)

                   gccTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGATGCCTGc                                                                     >  1:36399/1‑93 (MQ=255)

                      tctTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATc                                                                  >  2:4367696/1‑93 (MQ=255)

                      tctTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATc                                                                  >  1:726420/1‑93 (MQ=255)

                      tctTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATc                                                                  >  1:4057195/1‑93 (MQ=255)

                          tgtgGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGt                                                              <  2:5059371/93‑1 (MQ=255)

                           gtgGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTa                                                             <  1:1601636/93‑1 (MQ=255)

                           gtgGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTa                                                             <  1:4595058/93‑1 (MQ=255)

                             gggAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGc                                                           >  1:528819/1‑93 (MQ=255)

                              ggACCACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCt                                                          <  2:788449/93‑1 (MQ=255)

                                  cgctctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCa                                                      <  1:1731464/91‑1 (MQ=255)

                                   acTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCaa                                                     >  1:6271634/1‑93 (MQ=255)

                                   acTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCaa                                                     <  2:5808888/93‑1 (MQ=255)

                                     tctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAAt                                                   >  1:4862240/1‑93 (MQ=255)

                                     tctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAAt                                                   <  2:4007228/93‑1 (MQ=255)

                                      ctGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATg                                                  <  1:451001/93‑1 (MQ=255)

                                       tGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATgg                                                 <  1:1241342/93‑1 (MQ=255)

                                        gccgccgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGc                                                <  2:4605118/93‑1 (MQ=255)

                                         ccgccgccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCa                                               <  1:378363/93‑1 (MQ=255)

                                           gccgccATACCGATTAACATCTGTGGGCCAACGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATAGCATc                                             >  1:1160405/1‑93 (MQ=255)

                                              gccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGc                                          >  2:3360815/1‑93 (MQ=255)

                                              gccATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGCCATCAGc                                          >  2:4700148/1‑93 (MQ=255)

                                                cATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCca                                        >  2:1164311/1‑93 (MQ=255)

                                                cATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCca                                        >  2:2418703/1‑93 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCGTCACGTAGCTGGCAAATGGCATCAGCcaca                                      <  2:18051/93‑1 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcaca                                      <  2:2249266/93‑1 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcaca                                      <  2:1457440/93‑1 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcaca                                      <  1:4289217/93‑1 (MQ=255)

                                                  tACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCcaca                                      >  2:1336235/1‑93 (MQ=255)

                                                   aCCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAg                                     >  1:1047233/1‑93 (MQ=255)

                                                    ccGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAgg                                    >  1:2800726/1‑93 (MQ=255)

                                                    ccGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAgg                                    >  1:190141/1‑93 (MQ=255)

                                                    ccGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAgg                                    >  1:521638/1‑93 (MQ=255)

                                                     cGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAggg                                   >  1:2435631/1‑93 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                  >  1:771366/1‑93 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                  >  2:4271551/1‑93 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                  <  1:2360567/93‑1 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                  <  2:4744657/93‑1 (MQ=255)

                                                      gATTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGa                                  <  2:593226/93‑1 (MQ=255)

                                                       aTTAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAg                                 >  2:1548924/1‑93 (MQ=255)

                                                        ttAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGc                                <  1:6147731/93‑1 (MQ=255)

                                                        ttAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGc                                >  1:3743915/1‑93 (MQ=255)

                                                        ttAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGc                                >  1:2809807/1‑93 (MQ=255)

                                                         tAACATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGcc                               >  2:3844174/1‑93 (MQ=255)

                                                           aCATCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGa                             <  1:3102165/93‑1 (MQ=255)

                                                              tCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTg                          >  1:4051477/1‑93 (MQ=255)

                                                              tCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTg                          >  2:4471312/1‑93 (MQ=255)

                                                              tCTGTGGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTg                          >  1:1990240/1‑93 (MQ=255)

                                                                tgtgGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGaa                        >  1:3857135/1‑93 (MQ=255)

                                                                 gtgGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGaaa                       <  1:6078483/93‑1 (MQ=255)

                                                                 gtgGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGaaa                       <  2:2547235/93‑1 (MQ=255)

                                                                 gtgGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGaaa                       >  2:1783847/1‑93 (MQ=255)

                                                                  tgGGCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAg                      <  1:2175805/93‑1 (MQ=255)

                                                                     gCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaa                   <  1:247322/93‑1 (MQ=255)

                                                                     gCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaa                   >  2:4966883/1‑93 (MQ=255)

                                                                     gCCAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaa                   <  1:3386437/93‑1 (MQ=255)

                                                                      ccAAAGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCaaa                  >  1:1357847/1‑93 (MQ=255)

                                                                        aaaGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAt                <  1:4730318/93‑1 (MQ=255)

                                                                        aaaGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAAt                >  1:2485245/1‑93 (MQ=255)

                                                                          aGACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTc              >  2:3106381/1‑93 (MQ=255)

                                                                           gACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTcc             <  2:5680983/93‑1 (MQ=255)

                                                                           gACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTcc             >  2:5589748/1‑93 (MQ=255)

                                                                           gACAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTcc             >  1:3243304/1‑93 (MQ=255)

                                                                            aCAAAAAAACCAATAGTGAAGAAGCAGGTTGCCTGCAGCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcg            <  2:5107954/93‑1 (MQ=255)

                                                                               aanaaaCCNATAGTGAAGAAGCAGGTTGNCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcggtg         <  2:3295033/93‑3 (MQ=255)

                                                                               aaaaaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcggcg         <  1:3576865/93‑1 (MQ=255)

                                                                                aaaaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCcggcgg        <  1:5044248/93‑1 (MQ=255)

                                                                                 aaaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCggcggc       >  1:5895098/1‑93 (MQ=255)

                                                                                 aaaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAAGGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCggcggc       <  1:1524970/93‑1 (MQ=255)

                                                                                  aaaCCAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGgcggcg      >  2:6177658/1‑93 (MQ=255)

                                                                                      cAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGaaaa  <  1:1682806/93‑1 (MQ=255)

                                                                                      cAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGaaaa  <  2:300602/93‑1 (MQ=255)

                                                                                      cAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGaaaa  >  2:2139114/1‑93 (MQ=255)

                                                                                      cAATAGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGaaaa  >  2:1997479/1‑93 (MQ=255)

CCCCGTCGCCGCCCCTGCCGCCTCTTTGTGGGAACACTCTGCCGCCGCCATACCGATTAACATCTGTGGGCCAAAGACAAAAAAACCAATGGTGAAGAAGCAGGTTGCCTGCATCACGTAGCTGGCAAATGGCATCAGCCACAGGGAGCCGACTGAAAGCAAAATTCCGGCGGCGAAAA  >  NC_000913/3845103‑3845281

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`