BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,847,491	T→C	L91L (TTA→TTG)	b3668 ←	sensor histidine protein kinase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,847,491	0	T	C	100.0%	794.0 / NA	242	L91L (TTA→TTG)	b3668	sensor histidine protein kinase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (112/130); total (112/130)

Only 100 of 249 total aligned reads displayed.

CGCCGTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATAC  >  NC_000913/3847401‑3847580

  ccgTTACCGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCTAGATCAGCGCTACGGGCAGTAACGTCAGCAAAc                                                                                       <  2:59033/93‑1 (MQ=255)

   cgTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAAca                                                                                      >  1:4392793/1‑92 (MQ=255)

   cgTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACt                                                                                      <  2:1938449/93‑1 (MQ=255)

    gTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTa                                                                                     <  2:5111040/93‑1 (MQ=255)

    gTTAACGCCGCCCCCTGTAACAGCAAGGGGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTa                                                                                     >  2:2983297/1‑93 (MQ=255)

     ttAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTAc                                                                                    >  2:408503/1‑93 (MQ=255)

     ttAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTAc                                                                                    <  2:3819827/93‑1 (MQ=255)

         cgccgcCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGat                                                                                <  1:4945869/93‑1 (MQ=255)

         cgccgcCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGat                                                                                <  1:840509/93‑1 (MQ=255)

          gccgccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatc                                                                               <  1:3130713/93‑1 (MQ=255)

           ccgccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatca                                                                              <  1:5424078/93‑1 (MQ=255)

             gccCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGatcatc                                                                            >  2:4421304/1‑93 (MQ=255)

                cccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAAt                                                                         >  2:3694322/1‑93 (MQ=255)

                cccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAAt                                                                         >  1:1133732/1‑93 (MQ=255)

                cccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAAt                                                                         >  1:2359530/1‑93 (MQ=255)

                cccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAAt                                                                         <  1:2474065/93‑1 (MQ=255)

                 ccTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATa                                                                        >  1:1123922/1‑93 (MQ=255)

                   tGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAAc                                                                      <  2:1901465/93‑1 (MQ=255)

                   tGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAAc                                                                      <  1:5973036/93‑1 (MQ=255)

                   tGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAAc                                                                      >  2:4514165/1‑93 (MQ=255)

                   tGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAAc                                                                      >  1:5201570/1‑93 (MQ=255)

                    gTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACg                                                                     <  1:216924/93‑1 (MQ=255)

                      aaCAGCAGGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGa                                                                   <  2:5502451/93‑1 (MQ=255)

                       aCAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGaa                                                                  <  2:1081659/93‑1 (MQ=255)

                         aGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGaaaa                                                                <  1:1497182/93‑1 (MQ=255)

                         aGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGaaaa                                                                <  1:136175/93‑1 (MQ=255)

                          gCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAAt                                                               <  1:928831/93‑1 (MQ=255)

                            aaGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATgg                                                             <  1:5774981/93‑1 (MQ=255)

                             aGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATggg                                                            >  2:5577967/1‑93 (MQ=255)

                             aGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATggg                                                            <  1:4715816/93‑1 (MQ=255)

                              ggTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGt                                                           >  2:3174044/1‑93 (MQ=255)

                              ggTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGt                                                           <  1:3542712/93‑1 (MQ=255)

                               gTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGtt                                                          <  2:3030073/93‑1 (MQ=255)

                                tGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTa                                                         <  2:2871061/93‑1 (MQ=255)

                                 gcgcCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTaa                                                        >  2:1323079/1‑93 (MQ=255)

                                   gcCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAac                                                      <  1:3408773/93‑1 (MQ=255)

                                   gcCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAac                                                      >  1:4702530/1‑93 (MQ=255)

                                   gcCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAac                                                      >  1:3114807/1‑93 (MQ=255)

                                    ccAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAacc                                                     <  2:6020606/93‑1 (MQ=255)

                                     cAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccg                                                    >  1:1303709/1‑93 (MQ=255)

                                     cAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccg                                                    >  1:1518907/1‑93 (MQ=255)

                                     cAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccg                                                    <  2:645237/93‑1 (MQ=255)

                                      aGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAAGGGAAAATGGGTTAAaccgc                                                   >  1:4203283/1‑92 (MQ=255)

                                      aGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccga                                                   >  1:196519/1‑93 (MQ=255)

                                       gTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTACaccgac                                                  >  1:3945889/1‑93 (MQ=255)

                                       gTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccgac                                                  >  1:5063791/1‑93 (MQ=255)

                                         cACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAaccgaccg                                                <  2:3707356/93‑1 (MQ=255)

                                          aCGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGc                                               >  1:2342943/1‑93 (MQ=255)

                                           cGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGcc                                              >  1:2991878/1‑93 (MQ=255)

                                           cGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGcc                                              >  1:5168073/1‑93 (MQ=255)

                                           cGCTGAGGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGcc                                              <  2:5145691/93‑1 (MQ=255)

                                            gCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCt                                             <  2:3098927/93‑1 (MQ=255)

                                            gCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCt                                             <  2:4580263/93‑1 (MQ=255)

                                            gCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCt                                             <  2:5280431/93‑1 (MQ=255)

                                            gCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCt                                             >  2:2386039/1‑93 (MQ=255)

                                             cTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTg                                            >  2:4300806/1‑93 (MQ=255)

                                              tgttGGCGATAGCGCGAGATCAGCACTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGCCCGCCTGc                                           <  2:1587840/90‑1 (MQ=255)

                                              tGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGc                                           >  1:6244023/1‑93 (MQ=255)

                                               gATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCg                                          >  1:319338/1‑93 (MQ=255)

                                                   gCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAg                                      >  2:427414/1‑93 (MQ=255)

                                                         gcgcGAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTa                                >  1:1839683/1‑93 (MQ=255)

                                                          cgcgAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTaa                               <  2:1997041/93‑1 (MQ=255)

                                                           gcgAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTaaa                              <  1:5598099/93‑1 (MQ=255)

                                                           gcgAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTaaa                              >  1:2551469/1‑93 (MQ=255)

                                                            cgAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAAt                             <  2:2701479/93‑1 (MQ=255)

                                                            cgAGATCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAAt                             <  2:3183656/93‑1 (MQ=255)

                                                             gagaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATc                            >  1:6106978/1‑93 (MQ=255)

                                                             gagaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATc                            <  2:4209332/93‑1 (MQ=255)

                                                               gaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcag                          <  1:5389583/93‑1 (MQ=255)

                                                               gaTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcag                          <  2:2214138/93‑1 (MQ=255)

                                                                aTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcagc                         <  2:4231143/93‑1 (MQ=255)

                                                                aTCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcagc                         <  2:2065231/93‑1 (MQ=255)

                                                                 tCAGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATcagca                        <  1:5685516/93‑1 (MQ=255)

                                                                   aGCGCTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCagcagc                      <  2:4152564/93‑1 (MQ=255)

                                                                      gcTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCAc                   >  2:1681684/1‑93 (MQ=255)

                                                                      gcTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCAc                   <  2:5650280/93‑1 (MQ=255)

                                                                       cTACGGGCAGTAACGTCAGCACACTCCCGATGATCAATAACGGGAAATGCATAAAACCTACCGTCTGCGTTAACCAGTAAATCAGCAGacaca                  >  2:526497/1‑92 (MQ=255)

                                                                       cTACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACt                  <  1:1564790/93‑1 (MQ=255)

                                                                        tACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTc                 <  2:3479482/93‑1 (MQ=255)

                                                                        tACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTc                 >  2:1099469/1‑93 (MQ=255)

                                                                        tACGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTc                 <  2:4788484/93‑1 (MQ=255)

                                                                         aCGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTcc                >  1:3433835/1‑93 (MQ=255)

                                                                          cGGGCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcg               <  2:3384709/93‑1 (MQ=255)

                                                                           gggCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCcgc              >  1:1573051/1‑93 (MQ=255)

                                                                           gggCAGTAACGTCAGAAAACTACCGATCATCAATATGGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCTCTCcgc              <  2:4639171/93‑1 (MQ=255)

                                                                             gCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCgcgc            >  1:725356/1‑93 (MQ=255)

                                                                             gCAGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCgcgc            >  1:2797514/1‑93 (MQ=255)

                                                                               aGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc          >  1:4519696/1‑93 (MQ=255)

                                                                               aGTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc          >  2:1430242/1‑93 (MQ=255)

                                                                               aGTAACGGCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGccc          >  2:6196867/1‑93 (MQ=255)

                                                                                gTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCa         >  1:3877107/1‑93 (MQ=255)

                                                                                gTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCa         >  1:1728023/1‑93 (MQ=255)

                                                                                gTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCa         <  2:1766617/93‑1 (MQ=255)

                                                                                gTAACGTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGACCa         >  1:5801408/1‑93 (MQ=255)

                                                                                     gTCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAAt    <  1:1046002/93‑1 (MQ=255)

                                                                                      tCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAACCCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATa   <  2:4459799/93‑1 (MQ=255)

                                                                                      tCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATa   >  2:549257/1‑93 (MQ=255)

                                                                                      tCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATa   <  2:3851041/93‑1 (MQ=255)

                                                                                      tCAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATa   >  1:6289041/1‑93 (MQ=255)

                                                                                       cAGCAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATAc  <  1:4307348/93‑1 (MQ=255)

CGCCGTTAACGCCGCCCCCTGTAACAGCAAGGTGCGCCAGTCACGCTGATGGCGATAGCGCGAGATCAGCGCTACGGGCAGTAACGTCAGTAAACTACCGATCATCAATAACGGAAAATGGGTTAAACCGACCGCCTGCGTTAGCCAGTAAATCAGCAGCCACTCCGCGCCCAGCAATAC  >  NC_000913/3847401‑3847580

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`