BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,851,006	A→G	intergenic (‑391/‑537)	ivbL ← / → emrD	ilvB operon leader peptide/2‑module integral membrane pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,851,006	0	A	G	100.0%	791.0 / NA	245	intergenic (‑391/‑537)	ivbL/emrD	ilvB operon leader peptide/2‑module integral membrane pump
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (154/91); total (154/91)

Only 100 of 254 total aligned reads displayed.

TCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCT  >  NC_000913/3850917‑3851095

tCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTa                                                                                        >  2:4921679/1‑93 (MQ=255)

tCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTa                                                                                        >  2:6090727/1‑93 (MQ=255)

 ccAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTaa                                                                                       <  1:4687223/93‑1 (MQ=255)

 ccAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTaa                                                                                       <  1:3534001/93‑1 (MQ=255)

 ccAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTaa                                                                                       <  1:2254601/93‑1 (MQ=255)

  cAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAg                                                                                      >  1:5039040/1‑93 (MQ=255)

  cAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAg                                                                                      >  1:3937381/1‑93 (MQ=255)

  cAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAg                                                                                      >  1:3263322/1‑93 (MQ=255)

  cAAATATTACTGTTTATTTATACAGTAAACTTCGATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAg                                                                                      <  2:3390581/93‑1 (MQ=255)

   aaaTATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGt                                                                                     >  1:4035256/1‑93 (MQ=255)

    aaTATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTc                                                                                    >  1:1014200/1‑93 (MQ=255)

    aaTATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTc                                                                                    <  2:528405/93‑1 (MQ=255)

     atatTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTcc                                                                                   >  1:3142691/1‑93 (MQ=255)

      tatTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCt                                                                                  >  1:1543705/1‑93 (MQ=255)

       atTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTg                                                                                 >  2:3063162/1‑93 (MQ=255)

        ttACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTgg                                                                                >  1:4774060/1‑93 (MQ=255)

         tACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGc                                                                               <  2:6187579/93‑1 (MQ=255)

         tACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGc                                                                               <  2:5174931/93‑1 (MQ=255)

          aCTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCt                                                                              >  1:1440120/1‑93 (MQ=255)

           cTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTg                                                                             >  2:1993495/1‑93 (MQ=255)

           cTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTg                                                                             >  1:4307995/1‑93 (MQ=255)

               ttatttatACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAAc                                                                         >  1:4364722/1‑93 (MQ=255)

                 atttatACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACgg                                                                       >  1:1955426/1‑93 (MQ=255)

                  tttatACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACggg                                                                      <  2:2083207/93‑1 (MQ=255)

                   ttatACAGTAAACTTCTATAATATCACTGTAGGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGggt                                                                     >  2:3905971/1‑93 (MQ=255)

                    tataCAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGTGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGggtg                                                                    >  2:6309747/1‑93 (MQ=255)

                     ataCAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGggtgg                                                                   >  1:4412885/1‑93 (MQ=255)

                     ataCAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGggtgg                                                                   >  1:5439725/1‑93 (MQ=255)

                      taCAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGggtggt                                                                  >  2:48072/1‑93 (MQ=255)

                      taCAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGggtggt                                                                  <  2:5053414/93‑1 (MQ=255)

                      taCAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGggtggt                                                                  <  1:3677404/93‑1 (MQ=255)

                       aCAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGgtggtg                                                                 >  1:4272199/1‑93 (MQ=255)

                        cAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGc                                                                <  1:2955164/93‑1 (MQ=255)

                        cAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGc                                                                >  1:1501888/1‑93 (MQ=255)

                         aGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGcc                                                               >  1:1193952/1‑93 (MQ=255)

                          gTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCg                                                              >  1:828826/1‑93 (MQ=255)

                           tAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGt                                                             <  2:184221/93‑1 (MQ=255)

                            aaaCTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTc                                                            <  2:5461287/93‑1 (MQ=255)

                              aCTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCGGCATCGTTACCCGGCGCGCTCAGTCCTGGCTGAAACGGGTGGTGCCGTCAg                                                          >  2:1230267/1‑93 (MQ=255)

                              aCTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAg                                                          >  1:4520865/1‑93 (MQ=255)

                              aCTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAg                                                          >  1:5255292/1‑93 (MQ=255)

                              aCTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAg                                                          >  1:172593/1‑93 (MQ=255)

                                 tCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAgcgc                                                       >  1:611890/1‑93 (MQ=255)

                                  cTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGcc                                                      >  1:4990069/1‑93 (MQ=255)

                                   tataATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCt                                                     >  2:3147867/1‑93 (MQ=255)

                                   tataATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCt                                                     >  1:2711892/1‑93 (MQ=255)

                                    ataataTCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCtt                                                    <  1:3366958/93‑1 (MQ=255)

                                      aataTCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTaa                                                  <  1:5720615/93‑1 (MQ=255)

                                      aataTCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTaa                                                  >  2:4775786/1‑93 (MQ=255)

                                       atatCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAAc                                                 >  1:2813988/1‑93 (MQ=255)

                                        aatCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAAcc                                                <  1:3109885/92‑1 (MQ=255)

                                         atCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAAccc                                               >  1:701369/1‑93 (MQ=255)

                                         atCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAAccc                                               >  2:2360517/1‑93 (MQ=255)

                                          tCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAAcccc                                              <  2:464270/93‑1 (MQ=255)

                                            aCTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCcgc                                            >  1:6141615/1‑93 (MQ=255)

                                            aCTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCcgc                                            >  2:823501/1‑93 (MQ=255)

                                            aCTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCcgc                                            >  2:3751499/1‑93 (MQ=255)

                                              tGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTCAGTCCTGGCTGAAGCGGGTGGTGCCGTCAGCGCCTTAACCCcgtgg                                          >  2:3593054/1‑90 (MQ=255)

                                               gTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTg                                         >  2:242893/1‑93 (MQ=255)

                                                  cGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGc                                      <  1:2407430/93‑1 (MQ=255)

                                                   gCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGca                                     >  1:5872920/1‑93 (MQ=255)

                                                     aaTGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGcaca                                   <  2:4707606/93‑1 (MQ=255)

                                                     aaTGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGcaca                                   >  2:761393/1‑93 (MQ=255)

                                                     aaTGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGcaca                                   >  2:1087885/1‑93 (MQ=255)

                                                       tgtgTTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACt                                 >  1:4124644/1‑93 (MQ=255)

                                                       tgtgTTATGCGGGGGCCGCATCGTTACCCGGAGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACt                                 >  2:4288076/1‑93 (MQ=255)

                                                        gtgtTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACtg                                <  1:2187318/93‑1 (MQ=255)

                                                        gtgtTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACtg                                >  1:6011795/1‑93 (MQ=255)

                                                         tgtTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACtgt                               >  1:2544721/1‑93 (MQ=255)

                                                         tgtTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACtgt                               <  2:300710/93‑1 (MQ=255)

                                                         tgtTATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACtgt                               <  1:884843/93‑1 (MQ=255)

                                                            tATGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGtt                            <  2:5719498/93‑1 (MQ=255)

                                                             aTGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTa                           <  1:782324/93‑1 (MQ=255)

                                                              tGCGGGGGCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTAt                          <  2:4409175/93‑1 (MQ=255)

                                                                 gggggCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTc                       <  1:5395185/93‑1 (MQ=255)

                                                                  ggggCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTca                      >  1:1765340/1‑93 (MQ=255)

                                                                   gggCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTcaa                     >  2:1295430/1‑93 (MQ=255)

                                                                    ggCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTcaac                    <  1:5150408/93‑1 (MQ=255)

                                                                    ggCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTcaac                    <  2:2046831/93‑1 (MQ=255)

                                                                     gCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTcaaca                   >  2:4138126/1‑93 (MQ=255)

                                                                     gCCGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTcaaca                   >  2:1472984/1‑93 (MQ=255)

                                                                      ccGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTcaacaa                  >  2:2800955/1‑93 (MQ=255)

                                                                       cGCATCGTTACCCTGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAg                 >  2:6305486/1‑93 (MQ=255)

                                                                       cGCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAg                 >  1:692197/1‑93 (MQ=255)

                                                                        gCATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGc                >  1:5682446/1‑93 (MQ=255)

                                                                         cATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGca               <  2:5860991/93‑1 (MQ=255)

                                                                         cATCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGca               <  2:900089/93‑1 (MQ=255)

                                                                          aTCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGcac              >  2:3167807/1‑93 (MQ=255)

                                                                           tCGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGcaca             >  2:2639924/1‑93 (MQ=255)

                                                                            cGTTACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACaa            <  2:2202621/93‑1 (MQ=255)

                                                                               tACCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGt         <  1:5090327/93‑1 (MQ=255)

                                                                                aCCCGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGtt        <  1:2941668/93‑1 (MQ=255)

                                                                                 cccGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGttt       >  1:3832616/1‑93 (MQ=255)

                                                                                 cccGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGttt       >  1:1069300/1‑93 (MQ=255)

                                                                                  ccGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTtc      <  1:6284710/93‑1 (MQ=255)

                                                                                  ccGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTtc      <  1:2092611/93‑1 (MQ=255)

                                                                                   cGGCGCGCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGATtct     >  2:43120/1‑93 (MQ=255)

                                                                                     gcgcgcTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTcc   <  2:1628332/93‑1 (MQ=255)

                                                                                     gcgcgcTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAAAGTTTCTcc   >  2:4088636/1‑93 (MQ=255)

                                                                                      cgcgCTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCt  <  1:1128817/93‑1 (MQ=255)

TCCAAATATTACTGTTTATTTATACAGTAAACTTCTATAATATCACTGTACGCAATGTGTTATGCGGGGGCCGCATCGTTACCCGGCGCACTAAGTCCTGGCTGAAACGGGTGGTGCCGTCAGCGCCTTAACCCCGCGTGAGCACACTGTGTTATGTCAACAAGCACAACGTTTCTCCT  >  NC_000913/3850917‑3851095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`