BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,851,510	T→C	intergenic (‑895/‑33)	ivbL ← / → emrD	ilvB operon leader peptide/2‑module integral membrane pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,851,510	0	T	C	100.0%	717.3 / NA	220	intergenic (‑895/‑33)	ivbL/emrD	ilvB operon leader peptide/2‑module integral membrane pump
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (82/138); total (82/138)

Only 100 of 221 total aligned reads displayed.

GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG  >  NC_000913/3851420‑3851599

gCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGa                                                                                         >  2:3036025/1‑93 (MQ=255)

gCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGa                                                                                         >  1:5405153/1‑93 (MQ=255)

gCCGCGATAGAATTTCCCCTTCCTGGCGAATATCTGGCTAACATTGATCAATGTTATAGGTTACTCTCCCGCGTTTATCGGCGTGCGGAGCGa                                                                                         >  2:831117/1‑93 (MQ=255)

 ccGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAc                                                                                        >  1:3181264/1‑93 (MQ=255)

 ccGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAc                                                                                        <  1:1094333/93‑1 (MQ=255)

 ccGCTAAACAATCCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAc                                                                                        <  1:5505352/93‑1 (MQ=255)

    cTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTa                                                                                     <  2:5151826/93‑1 (MQ=255)

    cTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTCATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTa                                                                                     <  1:4436491/93‑1 (MQ=255)

     tAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAt                                                                                    <  1:3741854/93‑1 (MQ=255)

      aaaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGACAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTAtt                                                                                   <  1:3380217/93‑1 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  <  1:4979206/93‑1 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  >  2:3837302/1‑93 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  >  2:6169780/1‑93 (MQ=255)

       aaCAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTc                                                                                  <  1:6113413/93‑1 (MQ=255)

         cAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTa                                                                                >  2:2524620/1‑93 (MQ=255)

           aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAat                                                                              <  1:1739017/93‑1 (MQ=255)

           aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAat                                                                              <  2:2433296/93‑1 (MQ=255)

           aTTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAat                                                                              >  1:6252959/1‑93 (MQ=255)

            ttCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatt                                                                             <  2:846701/93‑1 (MQ=255)

             tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta                                                                            <  1:3778608/93‑1 (MQ=255)

             tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta                                                                            <  2:1240123/93‑1 (MQ=255)

             tCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAatta                                                                            >  2:4643818/1‑93 (MQ=255)

               cccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGAATTATTCTAattatt                                                                          <  2:277403/93‑1 (MQ=255)

                ccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttt                                                                         <  1:5857742/93‑1 (MQ=255)

                ccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttt                                                                         <  2:5540672/93‑1 (MQ=255)

                ccATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttt                                                                         <  2:40982/93‑1 (MQ=255)

                 cATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAtttt                                                                        >  2:2113799/1‑93 (MQ=255)

                  aTTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttttt                                                                       <  2:3322805/93‑1 (MQ=255)

                  aTTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttttt                                                                       <  1:731873/93‑1 (MQ=255)

                  aTTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTAttttt                                                                       >  2:4294243/1‑93 (MQ=255)

                   ttCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTta                                                                      <  2:1736589/93‑1 (MQ=255)

                   ttCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTta                                                                      <  1:4345897/93‑1 (MQ=255)

                    tCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTtat                                                                     >  2:2045708/1‑93 (MQ=255)

                     ccTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTtata                                                                    <  1:46023/93‑1 (MQ=255)

                       tGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaa                                                                  <  1:4828329/93‑1 (MQ=255)

                       tGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaa                                                                  <  2:3202454/93‑1 (MQ=255)

                        ggCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaaa                                                                 >  1:4910147/1‑93 (MQ=255)

                        ggCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATaaaa                                                                 >  2:4876961/1‑93 (MQ=255)

                         gCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAg                                                                <  2:5774709/93‑1 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  2:3632720/1‑93 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             <  2:5184265/93‑1 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             <  2:3608164/93‑1 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  2:1303140/1‑93 (MQ=255)

                            tataTCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCAt                                                             >  1:1514351/1‑93 (MQ=255)

                             atatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATc                                                            <  1:2715783/93‑1 (MQ=255)

                             atatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATc                                                            <  1:787348/93‑1 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc                                                           <  2:1950083/93‑1 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATcc                                                           >  2:6010655/1‑93 (MQ=255)

                              tatCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCAAATTATTTTTATAAAAGCATcc                                                           <  2:5161197/93‑1 (MQ=255)

                               atCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCg                                                          <  2:1894671/93‑1 (MQ=255)

                                tCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGt                                                         <  2:4579038/93‑1 (MQ=255)

                                   ggCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAt                                                      >  1:3278477/1‑93 (MQ=255)

                                   ggCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGAt                                                      <  1:3883988/93‑1 (MQ=255)

                                     cTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATaa                                                    <  1:1941386/93‑1 (MQ=255)

                                     cTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATaa                                                    >  2:4445702/1‑93 (MQ=255)

                                     cTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATaa                                                    <  2:730909/93‑1 (MQ=255)

                                     cTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATaa                                                    <  2:2145802/93‑1 (MQ=255)

                                      tAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAt                                                   >  1:1708638/1‑93 (MQ=255)

                                      tAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAAt                                                   <  2:6285942/93‑1 (MQ=255)

                                       aaCATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATg                                                  >  1:3054559/1‑93 (MQ=255)

                                       aaCATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATg                                                  >  2:4078043/1‑93 (MQ=255)

                                          aTTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaa                                               <  1:4016320/93‑1 (MQ=255)

                                           ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa                                              <  2:3790477/93‑1 (MQ=255)

                                           ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa                                              <  1:2837424/93‑1 (MQ=255)

                                           ttCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGaaaa                                              <  2:6226551/93‑1 (MQ=255)

                                             catcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAgg                                            <  2:3226429/93‑1 (MQ=255)

                                              atcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGc                                           <  1:1821296/93‑1 (MQ=255)

                                               tcaATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCa                                          <  1:558434/93‑1 (MQ=255)

                                                caATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaa                                         <  1:4134115/93‑1 (MQ=255)

                                                 aaTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaaa                                        <  2:4039495/93‑1 (MQ=255)

                                                 aaTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaaa                                        <  1:4659533/93‑1 (MQ=255)

                                                 aaTGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCaaa                                        >  1:5450203/1‑93 (MQ=255)

                                                   tgtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGa                                      >  1:1666260/1‑93 (MQ=255)

                                                    gtgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaa                                     >  2:6152602/1‑93 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    <  1:5296984/93‑1 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    <  1:2505399/93‑1 (MQ=255)

                                                     tgATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGaaa                                    <  1:5616183/93‑1 (MQ=255)

                                                          gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa                               >  2:3817111/1‑93 (MQ=255)

                                                          gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa                               <  1:244390/93‑1 (MQ=255)

                                                          gATTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCGAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCa                               >  1:3388338/1‑93 (MQ=255)

                                                           aTTCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCaa                              <  1:4124552/93‑1 (MQ=255)

                                                            ttCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAt                             >  2:602840/1‑93 (MQ=255)

                                                             tCCTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAtt                            <  1:526297/93‑1 (MQ=255)

                                                              ccTCTCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAAttt                           <  1:1992064/93‑1 (MQ=255)

                                                               ctctCCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTg                          >  2:1347223/1‑93 (MQ=255)

                                                                cctcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGt                         <  2:1865064/92‑1 (MQ=255)

                                                                cctcCCGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGt                         <  1:5185269/92‑1 (MQ=255)

                                                                    ccGCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTAtt                     <  2:3997978/93‑1 (MQ=255)

                                                                      gCATTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGa                   >  2:1502851/1‑93 (MQ=255)

                                                                        aTTTATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATg                 >  1:991455/1‑93 (MQ=255)

                                                                          ttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGtt               <  1:1567958/93‑1 (MQ=255)

                                                                          ttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGtt               >  1:1512919/1‑93 (MQ=255)

                                                                          ttATGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGtt               >  2:4398239/1‑93 (MQ=255)

                                                                            aTGGGAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTgg             >  1:3614649/1‑93 (MQ=255)

                                                                              gggAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTa           <  2:5236231/93‑1 (MQ=255)

                                                                              gggAATGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTa           <  2:511163/93‑1 (MQ=255)

                                                                                  aTGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTAc       <  1:2212832/93‑1 (MQ=255)

                                                                                   tGCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACt      <  1:5225201/93‑1 (MQ=255)

                                                                                    gCGTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTc     <  2:5359020/93‑1 (MQ=255)

                                                                                      gTAGCGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGt   >  2:583222/1‑93 (MQ=255)

GCCGCTAAACAATTCCCCATTCCTGGCGTATATCTGGCTAACATTCATCAATGTGATAGATTCCTCTCCCGCATTTATGGGAATGCGTAGTGACTTATTCTAATTATTTTTATAAAAGCATCCGTGATAATGAAAAGGCAAAGAAACGTCAATTTGTTATTGATGTTGGTATTACTCGTG  >  NC_000913/3851420‑3851599

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`