BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,874,579	A→G	M1T (ATG→ACG) †	yidA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,874,579	0	A	G	100.0%	719.4 / NA	219	M1T (ATG→ACG) †	yidA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (102/117); total (102/117)

Only 100 of 234 total aligned reads displayed.

GCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCA  >  NC_000913/3874489‑3874668

  ggCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAg                                                                                       <  1:3128852/93‑1 (MQ=255)

  ggCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAg                                                                                       <  2:4722070/93‑1 (MQ=255)

  ggCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAg                                                                                       <  2:367448/93‑1 (MQ=255)

        cGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTcccc                                                                                 <  2:1758707/93‑1 (MQ=255)

        cGCATTTTGAACGGCGGGGGGAATGGGGTGATCGGGGAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGGTTAATAGACGTGAGGTcccc                                                                                 >  2:6132718/1‑93 (MQ=255)

         gCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCa                                                                                <  2:2333911/93‑1 (MQ=255)

         gCATTTTTAACGGCGGGGGGAATGGGGTGGTCGGGGAGCAGAAGGGGGGCATCCCTATCGATAGCAATGAGGTTTATAACCGTGAGGTccccc                                                                                >  2:270877/1‑92 (MQ=255)

          cATTTTTAACGGCGGGTGGAATGGGGTGGTCGGGGAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTTCCCAg                                                                               >  2:980069/1‑93 (MQ=255)

            tttttAACGGCGGGGGAAATGGTGTGATCGGGCAGCAGAAGGGGGGCATCCATATCGATAGCAATGAGTTTAATAGACGTGAGGTTCCCAggg                                                                             >  2:4982727/1‑92 (MQ=255)

             ttttAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTa                                                                            <  2:5731845/93‑1 (MQ=255)

             ttttAACGGCGGGTGAAATGGGGTGATCGGGGAGCAGAAGGGGGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAggga                                                                            >  2:1050808/1‑91 (MQ=255)

             ttttAACGGCGGGGGGAATGGTGTGGTCGGGGAGCAGAAGGGGGGCATCCATATCGATAGCAATGAGGTTTATAGCCGTGGGGTGCCCAggga                                                                            >  2:5356411/1‑91 (MQ=255)

                tAACGGCGGGGGAAATGGGGTGATCGGGCAGCAGAAGGGGGGCATCCCCATCGATAGCAAAAAGGTTTATAACCCTGAGGTCCCCACGGAGAt                                                                         >  2:877920/1‑93 (MQ=255)

                    ggcggGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGt                                                                     <  2:4404695/93‑1 (MQ=255)

                     ccggGTGATATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGtt                                                                    >  1:5944645/2‑93 (MQ=255)

                       gggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTcc                                                                  <  2:5998991/93‑1 (MQ=255)

                       gggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTcc                                                                  <  1:4136625/93‑1 (MQ=255)

                        ggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCt                                                                 >  2:4968450/1‑93 (MQ=255)

                        ggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCt                                                                 >  2:1503325/1‑93 (MQ=255)

                        ggTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCt                                                                 <  1:6028534/93‑1 (MQ=255)

                         gTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTg                                                                >  2:4750140/1‑93 (MQ=255)

                         gTGAAATGGTGTAATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTg                                                                <  2:4198177/93‑1 (MQ=255)

                          tGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGa                                                               <  1:6064970/93‑1 (MQ=255)

                          ggAAATGGTGTGATCGGGCAGCAGAAGGGTTCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGa                                                               <  1:3690636/92‑1 (MQ=255)

                              aTGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCa                                                           <  2:3199802/93‑1 (MQ=255)

                               tGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt                                                          >  1:5368572/1‑93 (MQ=255)

                               tGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCAt                                                          <  1:5175597/93‑1 (MQ=255)

                                 gtgtGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGc                                                        <  2:5961320/93‑1 (MQ=255)

                                 gtgtGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGc                                                        >  1:5593088/1‑93 (MQ=255)

                                  tgtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCt                                                       >  2:4320160/1‑93 (MQ=255)

                                   gtgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTa                                                      >  2:5141177/1‑93 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                     <  1:3336081/93‑1 (MQ=255)

                                    tgATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTaa                                                     <  1:4956599/93‑1 (MQ=255)

                                      aTCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcg                                                   >  2:3105951/1‑93 (MQ=255)

                                      aTCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcg                                                   <  2:3663073/93‑1 (MQ=255)

                                       tCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcgc                                                  >  2:2991211/1‑93 (MQ=255)

                                       tCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcgc                                                  >  1:353508/1‑93 (MQ=255)

                                        cGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAAcgcg                                                 >  1:4731850/1‑93 (MQ=255)

                                         gggCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGa                                                <  2:2022389/93‑1 (MQ=255)

                                            cagcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTc                                             >  1:5791119/1‑93 (MQ=255)

                                             agcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTcc                                            >  1:813739/1‑93 (MQ=255)

                                              gcagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCg                                           >  1:1001907/1‑93 (MQ=255)

                                               cagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGc                                          <  2:1900617/93‑1 (MQ=255)

                                               cagAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGc                                          <  2:5784361/93‑1 (MQ=255)

                                                 gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                        >  1:1905471/1‑93 (MQ=255)

                                                 gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                        >  2:487158/1‑93 (MQ=255)

                                                 gAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTc                                        >  1:4867423/1‑93 (MQ=255)

                                                   aGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaa                                      <  1:3298230/93‑1 (MQ=255)

                                                     ggTGCCATCCATATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCaaaa                                    <  1:696726/93‑1 (MQ=255)

                                                       tGCCATCCATATCGATAGCAATGAGCTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAAt                                  >  2:5211966/1‑93 (MQ=255)

                                                         ccatccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa                                <  1:140294/93‑1 (MQ=255)

                                                         ccatccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa                                <  1:2066242/93‑1 (MQ=255)

                                                         ccatccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCa                                <  2:5007519/93‑1 (MQ=255)

                                                          catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                               <  1:1510161/93‑1 (MQ=255)

                                                          catccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAg                               <  2:158250/93‑1 (MQ=255)

                                                            tccatATCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTa                             >  1:2590428/1‑93 (MQ=255)

                                                               atatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa                          >  2:170574/1‑93 (MQ=255)

                                                               atatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa                          >  1:4231469/1‑93 (MQ=255)

                                                               atatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaa                          <  2:3809345/93‑1 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaac                         >  1:2767090/1‑93 (MQ=255)

                                                                tatCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaac                         <  1:5668329/93‑1 (MQ=255)

                                                                 atCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaaca                        >  2:3573924/1‑93 (MQ=255)

                                                                 atCGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTacaaca                        <  2:5083997/93‑1 (MQ=255)

                                                                   cGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAcc                      <  1:6286853/93‑1 (MQ=255)

                                                                   cGATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAcc                      <  1:5149206/93‑1 (MQ=255)

                                                                    gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                     <  1:455643/93‑1 (MQ=255)

                                                                    gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                     <  1:2632757/93‑1 (MQ=255)

                                                                    gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                     >  2:692521/1‑93 (MQ=255)

                                                                    gATAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACAccc                     <  2:4006704/93‑1 (MQ=255)

                                                                     aTAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCg                    >  2:2702892/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                   <  1:444174/93‑1 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                   >  2:658019/1‑93 (MQ=255)

                                                                      tAGCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGa                   >  1:5222197/1‑93 (MQ=255)

                                                                        gCAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAgg                 >  2:539861/1‑93 (MQ=255)

                                                                         cAATGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAggg                <  2:4959641/93‑1 (MQ=255)

                                                                          aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa               >  1:3816300/1‑93 (MQ=255)

                                                                          aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa               >  2:2687743/1‑93 (MQ=255)

                                                                          aaTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGa               >  1:4334146/1‑93 (MQ=255)

                                                                           aTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaa              >  2:1347909/1‑93 (MQ=255)

                                                                           aTGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaa              >  1:3611764/1‑93 (MQ=255)

                                                                            tGAGTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGaaa             <  1:481170/93‑1 (MQ=255)

                                                                               gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg          >  1:546807/1‑93 (MQ=255)

                                                                               gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg          >  1:1308341/1‑93 (MQ=255)

                                                                               gTTTAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgg          >  1:386345/1‑93 (MQ=255)

                                                                                tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAACATCAGTACAACACCCGAGGGAAAAggg         >  1:4381978/1‑93 (MQ=255)

                                                                                tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggg         <  1:162281/93‑1 (MQ=255)

                                                                                tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggg         <  2:3877132/93‑1 (MQ=255)

                                                                                tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggg         >  2:1977005/1‑93 (MQ=255)

                                                                                tttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggg         <  2:1615304/93‑1 (MQ=255)

                                                                                 ttAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAgggg        >  1:2428386/1‑93 (MQ=255)

                                                                                  tAATAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAggggg       >  1:4055439/1‑93 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTTCAACCCCCGAGGGAAAAGGGGGa      <  2:1144305/93‑1 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACTCCCGAGGGAAAAGGGGGa      <  1:2245075/93‑1 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGa      >  2:933230/1‑93 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGa      >  1:3410103/1‑93 (MQ=255)

                                                                                   aaTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGa      >  2:2583471/1‑93 (MQ=255)

                                                                                    aTAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTAAAAAATCAGTACAACACCCGAGGGAAAAGGGGGAt     <  1:1034083/93‑1 (MQ=255)

                                                                                     tAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATg    >  2:5581716/1‑93 (MQ=255)

                                                                                     tAGCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATg    >  2:2351/1‑93 (MQ=255)

                                                                                       gCCGTGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCa  >  1:4212946/1‑93 (MQ=255)

GCGGCAATCGCATTTTTAACGGCGGGTGAAATGGTGTGATCGGGCAGCAGAAGGGTGCCATCCATATCGATAGCAATGAGTTTAATAGCCATGAGTTCCCCAGGTAGATTGGTTCCTGACCCATGCTAACGCGATTCCGCTCAAAAATCAGTACAACACCCGAGGGAAAAGGGGGATGCA  >  NC_000913/3874489‑3874668

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`