BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,875,213	T→C	intergenic (‑120/+120)	b3698 ← / ← gyrB	hypothetical protein/DNA gyrase subunit B

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,875,213	0	T	C	100.0%	848.5 / NA	263	intergenic (‑120/+120)	b3698/gyrB	hypothetical protein/DNA gyrase subunit B
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (132/131); total (132/131)

Only 100 of 282 total aligned reads displayed.

ACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGC  >  NC_000913/3875123‑3875302

aCCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGc                                                                                          >  2:5684491/1‑93 (MQ=255)

  ccAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCg                                                                                        <  1:249684/93‑1 (MQ=255)

   cAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCgg                                                                                       >  1:5257915/1‑93 (MQ=255)

    aaaaaGTATATATGTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGa                                                                                      <  2:6238395/93‑1 (MQ=255)

    aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGa                                                                                      >  1:4777393/1‑93 (MQ=255)

    aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGa                                                                                      <  1:5623297/93‑1 (MQ=255)

    aaaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCCCCggg                                                                                      >  1:1109998/1‑92 (MQ=255)

     aaaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGAt                                                                                     >  1:4610706/1‑93 (MQ=255)

      aaaGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATg                                                                                    >  2:2131561/1‑93 (MQ=255)

           ataGATTTGCGGGATGATAATTGCGGATTGCGGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCCCCGGAGgcggcg                                                                               >  1:2394383/1‑93 (MQ=255)

              gATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCCGAAGCGGCGTGa                                                                            >  2:1413252/1‑93 (MQ=255)

               aTTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGaa                                                                           >  1:1434557/1‑93 (MQ=255)

                     gggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCtt                                                                     <  1:5309220/93‑1 (MQ=255)

                      ggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGCACGCCTTa                                                                    <  2:6163367/93‑1 (MQ=255)

                       gatgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑t                                                                  <  1:6097441/93‑1 (MQ=255)

                        atgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑Tc                                                                 >  1:4098634/1‑93 (MQ=255)

                        atgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑Tc                                                                 <  2:2306072/93‑1 (MQ=255)

                         tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGCTGCGGGGTGGACGCCTTT‑Tct                                                                >  2:1246710/1‑92 (MQ=38)

                         tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑Tcc                                                                <  2:3859047/93‑1 (MQ=255)

                         tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑Tcc                                                                <  1:3567345/93‑1 (MQ=255)

                          gatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCg                                                               <  1:4537880/93‑1 (MQ=255)

                           atAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACGCCCTA‑ttccg                                                              >  1:2383437/1‑89 (MQ=255)

                            tAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGc                                                             <  2:5265020/93‑1 (MQ=255)

                             aaTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACGCCTTA‑TTCCGcc                                                            >  1:2328036/1‑93 (MQ=38)

                             aaTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGcc                                                            >  2:1041568/1‑93 (MQ=255)

                             aaTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCCGCTGCGGCGTGAACGCCTTA‑TCCGGcc                                                            >  1:3156289/1‑93 (MQ=255)

                              aTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGGACGCCTTA‑TCCCGCCt                                                           >  1:1356883/1‑93 (MQ=255)

                              aTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCt                                                           >  1:4885416/1‑93 (MQ=255)

                                tGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTAc                                                         <  2:3567446/93‑1 (MQ=255)

                                  cGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACaa                                                       <  1:4256149/93‑1 (MQ=255)

                                   ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGGTGCGGCGTGGACGCCCTA‑TTCCGCCT‑Caaaa                                                     >  2:1341376/1‑93 (MQ=255)

                                   ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACaaa                                                      <  1:1050269/93‑1 (MQ=255)

                                   ggATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACaaa                                                      <  2:1624486/93‑1 (MQ=255)

                                      ttGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACTCCTTA‑TCCGGCCTACAAAAta                                                   >  1:548369/1‑92 (MQ=255)

                                       tGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGGCGGATGCGGCGTGAACGCCTTA‑TCCGGTCTACAAAATCa                                                  >  2:2940494/1‑93 (MQ=255)

                                       tGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCa                                                  <  1:5847734/93‑1 (MQ=255)

                                       tGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCa                                                  <  1:719412/93‑1 (MQ=255)

                                        gCAGAAATAAAAGGGGCGGAGATGATCTCCTCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCAt                                                 <  2:1219492/93‑1 (MQ=255)

                                        gCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCAt                                                 <  1:268610/93‑1 (MQ=255)

                                        gCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCAt                                                 <  1:4875255/93‑1 (MQ=255)

                                        gCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCAt                                                 <  2:4035625/93‑1 (MQ=255)

                                          aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGa                                               <  1:3734249/93‑1 (MQ=255)

                                          aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGa                                               <  2:187978/93‑1 (MQ=255)

                                          aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGa                                               <  2:1770534/93‑1 (MQ=255)

                                          aGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCCGCCTACAAAATCATGa                                               >  1:366257/1‑93 (MQ=255)

                                             aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGaaaa                                            <  1:184189/93‑1 (MQ=255)

                                             aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGaaaa                                            <  1:63095/93‑1 (MQ=255)

                                             aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGaaaa                                            <  1:123608/93‑1 (MQ=255)

                                              aTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAAt                                           >  2:1805138/1‑93 (MQ=255)

                                              aTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAAt                                           >  1:6215957/1‑93 (MQ=255)

                                                aaaaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAAATc                                         >  1:3641297/1‑93 (MQ=255)

                                                aaaaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCCGATGCGGCGTGGACGCCCTA‑TCCCGCCTACCAAATCAAGAAAAATc                                         >  1:191138/1‑93 (MQ=37)

                                                 aaaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATTATGAAAATTCa                                        >  1:5004718/1‑93 (MQ=255)

                                                  aaaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCaa                                       <  2:3367827/93‑1 (MQ=255)

                                                   aaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGGGAACGCCCTA‑TTCCGGCTACACAAACATTAGAATTTaaa                                      >  2:5755651/1‑92 (MQ=255)

                                                      ggCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGTCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACa                                   >  2:5912885/1‑93 (MQ=255)

                                                       gCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACAt                                  <  1:2896463/93‑1 (MQ=255)

                                                       gCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCCGATGCGGCGTGAACGCCTTA‑TTCCGCCTACCAAATCATGAAAAATCAATACAt                                  >  2:4518007/1‑93 (MQ=25)

                                                        cGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACAtt                                 <  1:5537641/93‑1 (MQ=255)

                                                        cGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACAtt                                 <  2:3680058/93‑1 (MQ=255)

                                                         ggAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTAAATACATTg                                <  2:5489195/93‑1 (MQ=255)

                                                         ggAGATGATCTCCGCCCTTTTCTTATAGCTTCTCGCCCGATGCGGCGGGAGCGCCCTA‑TCCCGCCCCCCAAAACAATAAAAATTAATACAttt                                >  1:32366/1‑92 (MQ=255)

                                                          gagaTGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGc                               >  2:4755393/1‑93 (MQ=255)

                                                          gagaTGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACCCCTTA‑TCCCGCCTCCAAAATCATGAAAACTCAATTCATTGc                               >  1:5973319/1‑93 (MQ=25)

                                                           agaTGATCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCa                              <  2:1317346/93‑1 (MQ=255)

                                                            gatgatCTCCGCCCTTTTCTTATAGCTTCTCGCCCGATGCGGCGTGAAAGCCTTA‑TCCCGCCTACAAAATCATGAAAAATTAATACATTgtca                             >  2:4632171/1‑90 (MQ=255)

                                                               gatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGGGGGGGGGAAGCCCTATTCCGGCC‑ACAAAAACAATAAAAATTAAAAAACTTCAAGAt                          >  2:2433264/1‑93 (MQ=255)

                                                               gatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAt                          >  1:840247/1‑93 (MQ=255)

                                                               gatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAt                          <  1:3906407/93‑1 (MQ=255)

                                                               gatCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAt                          <  2:160237/93‑1 (MQ=255)

                                                                atCTCCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAtt                         >  1:5223243/1‑93 (MQ=255)

                                                                 tctcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt                        <  1:2816325/93‑1 (MQ=255)

                                                                 tctcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACACCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGAttt                        >  1:5141566/1‑93 (MQ=255)

                                                                   tcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTc                      >  2:3075411/1‑93 (MQ=255)

                                                                   tcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCCTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAAGttttt                      >  2:722543/1‑92 (MQ=21)

                                                                   tcCGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCCTA‑TCCCGCCTACAAAATCACGAAAAATCAATACATTGCAAGAttttt                      >  1:3820425/1‑92 (MQ=21)

                                                                    ccGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCg                     <  2:3555312/93‑1 (MQ=255)

                                                                    ccGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCg                     >  1:6183202/1‑93 (MQ=255)

                                                                     cGCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGt                    <  1:2039911/93‑1 (MQ=255)

                                                                      gCCCTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TTCCGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTa                   >  2:1502817/1‑93 (MQ=255)

                                                                       cccTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAg                  <  1:675590/93‑1 (MQ=255)

                                                                         cTTTTCTTATAGCTTCTCGCCGGATGCGGCGTGAAAGCCTTA‑TCCGGCCTACAAAATCATGAAAATTTAATACATTGCAAGATTTTCGTAGGc                >  2:2020015/1‑93 (MQ=255)

                                                                          ttttCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGcc               <  2:285233/93‑1 (MQ=255)

                                                                          ttttCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGcc               <  2:4315632/93‑1 (MQ=255)

                                                                           tttCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCt              <  2:5034403/93‑1 (MQ=255)

                                                                            ttCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTg             >  1:402120/1‑93 (MQ=255)

                                                                             tCTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGa            <  2:2508047/93‑1 (MQ=255)

                                                                              cTTATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGAt           <  2:1174794/93‑1 (MQ=255)

                                                                               ttATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa          <  1:3020922/93‑1 (MQ=255)

                                                                               ttATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa          >  1:3033927/1‑93 (MQ=255)

                                                                               ttATAGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa          <  1:2171393/93‑1 (MQ=255)

                                                                                tataGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa         >  1:3120292/1‑93 (MQ=255)

                                                                                tataGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATaa         >  2:5267983/1‑93 (MQ=255)

                                                                                 ataGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAg        <  2:5591840/93‑1 (MQ=255)

                                                                                  taGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGc       <  2:833145/93‑1 (MQ=255)

                                                                                  taGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGc       <  1:940066/93‑1 (MQ=255)

                                                                                  taGCTTCTCGCCGGATGCGGCGTGAACGCCCTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGc       >  2:2995662/1‑93 (MQ=255)

                                                                                   aGCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTTGTAGGCCTGATAAACg      >  2:4852697/1‑93 (MQ=255)

                                                                                    gCTTCTCGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGt     <  2:5991290/93‑1 (MQ=255)

                                                                                       tctcGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgc  >  2:467376/1‑93 (MQ=255)

ACCCAAAAAGTATAGATTTGCGGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTA‑TCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGC  >  NC_000913/3875123‑3875302

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`