BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,883,067	T→C	D121D (GAT→GAC)	yidC →	60 KD inner‑membrane protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,883,067	0	T	C	100.0%	787.6 / NA	248	D121D (GAT→GAC)	yidC	60 KD inner‑membrane protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/121); total (127/121)

Only 100 of 262 total aligned reads displayed.

GAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGAT  >  NC_000913/3882977‑3883156

  aCTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAcc                                                                                       >  2:898010/1‑93 (MQ=255)

  aCTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAcc                                                                                       >  2:3837005/1‑93 (MQ=255)

   ctctACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAccc                                                                                      >  1:1250036/1‑93 (MQ=255)

   ctctACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAAccc                                                                                      <  1:3188668/93‑1 (MQ=255)

    tctACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCg                                                                                     >  2:5831002/1‑93 (MQ=255)

      tACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGc                                                                                   >  1:3777616/1‑93 (MQ=255)

      tACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGc                                                                                   >  1:6266572/1‑93 (MQ=255)

        cccAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTa                                                                                 <  2:3106736/93‑1 (MQ=255)

         ccAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTaa                                                                                <  2:3364483/93‑1 (MQ=255)

         ccAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTaa                                                                                <  1:4373228/93‑1 (MQ=255)

          cAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAAc                                                                               >  1:3440828/1‑93 (MQ=255)

           aGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACg                                                                              >  2:5087757/1‑93 (MQ=255)

             ccGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGc                                                                            <  1:2813754/93‑1 (MQ=255)

              cGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGcc                                                                           >  1:3528506/1‑93 (MQ=255)

               gTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGccc                                                                          >  1:4580031/1‑93 (MQ=255)

               gTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGccc                                                                          >  2:138925/1‑93 (MQ=255)

               gTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGccc                                                                          >  2:728145/1‑93 (MQ=255)

                ttCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCcg                                                                         <  1:6109973/93‑1 (MQ=255)

                ttCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCcg                                                                         >  1:672156/1‑93 (MQ=255)

                    aGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTc                                                                     >  1:4293627/1‑93 (MQ=255)

                    aGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTc                                                                     <  2:122128/93‑1 (MQ=255)

                     gCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTcc                                                                    <  2:1819785/93‑1 (MQ=255)

                        gTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCt                                                                 >  2:2370686/1‑93 (MQ=255)

                        gTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCt                                                                 >  2:5002345/1‑93 (MQ=255)

                         ttGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTg                                                                <  2:2948949/93‑1 (MQ=255)

                         tcggAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTg                                                                <  2:5301394/91‑1 (MQ=255)

                          tGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGt                                                               <  2:3524431/93‑1 (MQ=255)

                          tGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGt                                                               <  2:1294365/93‑1 (MQ=255)

                            gAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGtat                                                             <  1:526159/93‑1 (MQ=255)

                               aCTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAc                                                          <  2:4880809/93‑1 (MQ=255)

                               aCTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAAc                                                          <  2:4310261/93‑1 (MQ=255)

                                cTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACg                                                         >  2:151528/1‑93 (MQ=255)

                                cTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACg                                                         >  1:1146790/1‑93 (MQ=255)

                                cTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACg                                                         >  2:3483377/1‑93 (MQ=255)

                                cTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACg                                                         <  1:3603074/93‑1 (MQ=255)

                                 ttCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGCCAACTCGGCTAACGGGGCACGTCCGCTGTCTAACGt                                                        >  2:4415468/1‑93 (MQ=255)

                                 ttCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGt                                                        >  1:1953415/1‑93 (MQ=255)

                                 ttCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGt                                                        >  1:916538/1‑93 (MQ=255)

                                 ttCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGt                                                        >  2:458854/1‑93 (MQ=255)

                                 ttCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGt                                                        >  1:4079913/1‑93 (MQ=255)

                                  tCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGtt                                                       >  1:586067/1‑93 (MQ=255)

                                   cACCGCAGTTTATTTAACAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTg                                                      >  1:3969902/1‑93 (MQ=255)

                                     ccGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaa                                                    >  2:4852120/1‑93 (MQ=255)

                                     ccGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaa                                                    >  2:5782617/1‑93 (MQ=255)

                                       gCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaaaa                                                  >  2:2985161/1‑93 (MQ=255)

                                       gCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaaaa                                                  <  2:5695705/93‑1 (MQ=255)

                                        cAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaaaaa                                                 >  1:5301016/1‑93 (MQ=255)

                                        cAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGaaaaa                                                 <  1:1540419/93‑1 (MQ=255)

                                         aGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAg                                                >  1:2958944/1‑93 (MQ=255)

                                          gTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGa                                               <  2:1367220/93‑1 (MQ=255)

                                           tttatttaTCAGGCACAGAGCGGTCTGACCGGTCGTGATGGGCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGAc                                              >  2:6215491/1‑93 (MQ=255)

                                            ttatttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACg                                             >  1:899091/1‑93 (MQ=255)

                                            ttatttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACg                                             <  2:4614901/93‑1 (MQ=255)

                                             tatttatCAGGCACAGAGCGGTCTGACCTGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGc                                            <  1:601536/93‑1 (MQ=255)

                                               tttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCtt                                          <  1:2325303/93‑1 (MQ=255)

                                               tttatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCtt                                          <  2:3133276/93‑1 (MQ=255)

                                                 tatCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTAt                                        <  1:2213929/93‑1 (MQ=255)

                                                  atCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTAtg                                       <  2:2144386/93‑1 (MQ=255)

                                                   tCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTAtgt                                      <  2:2220163/93‑1 (MQ=255)

                                                     aGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgc                                    >  2:107937/1‑93 (MQ=255)

                                                     aGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgc                                    >  1:5058358/1‑93 (MQ=255)

                                                     aGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGGgc                                    <  2:2525502/93‑1 (MQ=255)

                                                      ggCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgct                                   >  1:4745036/1‑93 (MQ=255)

                                                      ggCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgct                                   <  1:2725973/93‑1 (MQ=255)

                                                         acaGAGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgctggc                                >  2:1940500/1‑93 (MQ=255)

                                                          caGCGCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgctggct                               <  1:2396959/93‑1 (MQ=255)

                                                           agagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTgctggctg                              <  1:5014258/93‑1 (MQ=255)

                                                            gagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGa                             <  1:1277239/93‑1 (MQ=255)

                                                            gagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGa                             >  2:5524226/1‑93 (MQ=255)

                                                            gagCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGa                             >  1:1029578/1‑93 (MQ=255)

                                                             agCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGaa                            >  1:2164788/1‑93 (MQ=255)

                                                              gCGGTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAg                           >  2:2422792/1‑93 (MQ=255)

                                                                ggTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGt                         <  2:2249915/93‑1 (MQ=255)

                                                                 gTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGGAGGTc                        >  2:2713855/1‑93 (MQ=255)

                                                                 gTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTc                        >  2:5912950/1‑93 (MQ=255)

                                                                 gTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTc                        <  2:5440817/93‑1 (MQ=255)

                                                                 gTCTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTc                        <  2:1966727/93‑1 (MQ=255)

                                                                   cTGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCaa                      >  2:505237/1‑93 (MQ=255)

                                                                    tGACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCaaa                     >  1:5558153/1‑93 (MQ=255)

                                                                     gACCGGTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCaaaa                    >  1:5374607/1‑93 (MQ=255)

                                                                          gTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAAc               <  2:3860112/93‑1 (MQ=255)

                                                                          gTCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAAc               >  1:4114574/1‑93 (MQ=255)

                                                                           tCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCCAAACGAACt              >  2:5357841/1‑93 (MQ=255)

                                                                           tCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACt              <  1:5118502/93‑1 (MQ=255)

                                                                           tCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACt              <  1:1406269/93‑1 (MQ=255)

                                                                           tCGTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACt              <  1:1912011/93‑1 (MQ=255)

                                                                             gTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGc            <  1:5234337/93‑1 (MQ=255)

                                                                             gTGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGc            <  1:1791742/93‑1 (MQ=255)

                                                                              tGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCa           >  2:3225065/1‑93 (MQ=255)

                                                                              tGATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCa           <  2:1831448/93‑1 (MQ=255)

                                                                              tGATCGCCGGCAGAACCCTGCTAACGGCCCGCGTCCGCTGTATACCGTTGAAAAAGACGCTTATGTGCTGACTGACGGTCAAAACGCACTGCa           <  2:3634409/93‑1 (MQ=255)

                                                                               gATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAg          >  1:4832772/1‑93 (MQ=255)

                                                                               gATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAg          >  1:5494487/1‑93 (MQ=255)

                                                                               gATGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAg          <  1:3878972/93‑1 (MQ=255)

                                                                                 tGGCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAggg        >  1:1340408/1‑92 (MQ=255)

                                                                                  ggCCCGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTg       <  2:4119612/93‑1 (MQ=255)

                                                                                      cGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGa   <  1:4686636/93‑1 (MQ=255)

                                                                                      cGGACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGa   >  2:3393716/1‑93 (MQ=255)

                                                                                       ggACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGAt  >  2:5191065/1‑93 (MQ=255)

                                                                                       ggACAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGAt  >  1:1719601/1‑93 (MQ=255)

GAACTCTACCCAGCCGTTCCAGCTGTTGGAAACTTCACCGCAGTTTATTTATCAGGCACAGAGCGGTCTGACCGGTCGTGATGGCCCGGATAACCCGGCTAACGGCCCGCGTCCGCTGTATAACGTTGAAAAAGACGCTTATGTGCTGGCTGAAGGTCAAAACGAACTGCAGGTGCCGAT  >  NC_000913/3882977‑3883156

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`