BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,896,607	T→C	T139A (ACG→GCG)	b3718 ←	putative isomerase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,896,607	0	T	C	100.0%	804.1 / NA	248	T139A (ACG→GCG)	b3718	putative isomerase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (126/122); total (126/122)

Only 100 of 250 total aligned reads displayed.

AAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCA  >  NC_000913/3896517‑3896695

 aaaGTCGCCACCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCAtt                                                                                       <  2:3739525/93‑1 (MQ=255)

  aaGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTc                                                                                      <  2:5949555/93‑1 (MQ=255)

   aGTCGCCGCCCAACTCGCCATGCGCCACAATGTCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCg                                                                                     <  1:1226934/93‑1 (MQ=255)

   aGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCg                                                                                     <  1:2025931/93‑1 (MQ=255)

    gTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCgg                                                                                    >  1:2163892/1‑93 (MQ=255)

         cgccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAAt                                                                               >  2:1275327/1‑93 (MQ=255)

         cgccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAAt                                                                               <  1:5742397/93‑1 (MQ=255)

          gccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAAtt                                                                              <  1:3242509/93‑1 (MQ=255)

          gccCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAAtt                                                                              >  2:2134104/1‑93 (MQ=255)

            ccAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGc                                                                            >  2:4937645/1‑93 (MQ=255)

            ccAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGc                                                                            >  1:1354249/1‑93 (MQ=255)

             cAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGcc                                                                           <  2:2872782/93‑1 (MQ=255)

             cAACTCGCCATGCGCCACAATATCAACCAGCTCTCCCTGGATCGGGAACTCCGCGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGcc                                                                           <  1:3338952/93‑1 (MQ=255)

              aaCTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCca                                                                          <  2:2884527/93‑1 (MQ=255)

               aCTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCcac                                                                         <  2:71261/93‑1 (MQ=255)

                cTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCcaca                                                                        <  2:3785680/93‑1 (MQ=255)

                 tCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACaa                                                                       >  1:3648060/1‑93 (MQ=255)

                   gCCATGCGCCACAATACCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACaaaa                                                                     <  1:1481096/93‑1 (MQ=255)

                    ccATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACaaaaa                                                                    >  2:4999317/1‑93 (MQ=255)

                     cATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAAt                                                                   <  1:5533949/93‑1 (MQ=255)

                     cATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAAt                                                                   >  1:3918661/1‑93 (MQ=255)

                      aTGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAAta                                                                  >  1:4402908/1‑92 (MQ=255)

                      aTGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGCCGCATTCGGCAAATTGCCACAAAAATg                                                                  >  1:2768993/1‑93 (MQ=255)

                       tGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGa                                                                 <  2:2013757/93‑1 (MQ=255)

                       tGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGa                                                                 >  2:1603963/1‑93 (MQ=255)

                        gcgcCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGAc                                                                <  1:2300514/93‑1 (MQ=255)

                         cgcCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGAcc                                                               >  1:5846320/1‑93 (MQ=255)

                         cgcCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGAcc                                                               >  2:1915605/1‑93 (MQ=255)

                          gcCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCa                                                              <  1:1109323/93‑1 (MQ=255)

                           ccACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCAt                                                             <  1:1008682/93‑1 (MQ=255)

                            cacaATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATc                                                            >  2:1657745/1‑93 (MQ=255)

                             acaATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCt                                                           <  2:6121680/93‑1 (MQ=255)

                              caATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTg                                                          <  2:5353745/93‑1 (MQ=255)

                                 tatCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCAc                                                       <  2:4792818/93‑1 (MQ=255)

                                 tatCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCAc                                                       >  2:1076699/1‑93 (MQ=255)

                                   tCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCt                                                     >  2:2073473/1‑93 (MQ=255)

                                      aCCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAAt                                                  <  2:3568850/93‑1 (MQ=255)

                                      aCCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAAt                                                  <  2:2314900/93‑1 (MQ=255)

                                      aCCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAAt                                                  <  2:6026254/93‑1 (MQ=255)

                                         aTCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATccc                                               <  1:3135088/93‑1 (MQ=255)

                                          tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa                                              <  2:5726361/93‑1 (MQ=255)

                                          tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa                                              >  2:6040321/1‑93 (MQ=255)

                                          tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa                                              >  2:1682077/1‑93 (MQ=255)

                                          tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa                                              <  2:793251/93‑1 (MQ=255)

                                          tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa                                              >  1:1041077/1‑93 (MQ=255)

                                          tctctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCa                                              <  1:4093624/93‑1 (MQ=255)

                                            tctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGc                                            >  2:3061764/1‑93 (MQ=255)

                                            tctcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGc                                            >  1:2862570/1‑93 (MQ=255)

                                              tcCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcac                                          <  2:2560847/93‑1 (MQ=255)

                                               cccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCGCCTAATCCCAGcacc                                         >  1:913438/1‑93 (MQ=255)

                                               cccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcacc                                         >  1:211088/1‑93 (MQ=255)

                                               cccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcacc                                         <  1:3890966/93‑1 (MQ=255)

                                                ccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcacca                                        <  2:2771460/93‑1 (MQ=255)

                                                ccTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcacca                                        <  2:3963931/93‑1 (MQ=255)

                                                 cTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGcaccac                                       >  2:74709/1‑93 (MQ=255)

                                                  tGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCaccacc                                      >  1:1838674/1‑93 (MQ=255)

                                                  tGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCaccacc                                      >  2:4266497/1‑93 (MQ=255)

                                                    gATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaa                                    <  1:5074665/93‑1 (MQ=255)

                                                    gATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaa                                    >  1:4876979/1‑93 (MQ=255)

                                                     aTCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaaa                                   <  1:6048589/93‑1 (MQ=255)

                                                     aTCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaaa                                   >  2:5299931/1‑93 (MQ=255)

                                                     aTCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCaaa                                   <  1:982462/93‑1 (MQ=255)

                                                        gggAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATcc                                >  1:4966967/1‑93 (MQ=255)

                                                        gggAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATcc                                >  2:87285/1‑93 (MQ=255)

                                                        gggAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATcc                                >  1:5264087/1‑93 (MQ=255)

                                                         ggAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCa                               >  1:3592992/1‑93 (MQ=255)

                                                          gAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAg                              <  2:5396975/93‑1 (MQ=255)

                                                          gAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAg                              <  2:3840444/93‑1 (MQ=255)

                                                          gAACTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAg                              >  2:4329547/1‑93 (MQ=255)

                                                           aaCTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGt                             <  1:631115/93‑1 (MQ=255)

                                                           aaCTCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGt                             >  2:2258231/1‑93 (MQ=255)

                                                              tCCACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCg                          >  2:4138511/1‑93 (MQ=255)

                                                               ccACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGc                         >  1:161019/1‑93 (MQ=255)

                                                                cACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGGCCATCGGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc                        <  2:1583662/93‑1 (MQ=255)

                                                                cACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc                        <  2:4535933/93‑1 (MQ=255)

                                                                cACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc                        <  2:6184219/93‑1 (MQ=255)

                                                                cACGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGcc                        >  2:3563598/1‑93 (MQ=255)

                                                                 aCGGTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCt                       <  2:2199985/93‑1 (MQ=255)

                                                                   ggTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTc                     >  1:164327/1‑93 (MQ=255)

                                                                    gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCATCAAATCCAGTCCGCCTTCa                    <  2:4812430/93‑1 (MQ=255)

                                                                    gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa                    >  2:3193689/1‑93 (MQ=255)

                                                                    gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa                    <  2:5846252/93‑1 (MQ=255)

                                                                    gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa                    <  2:5671368/93‑1 (MQ=255)

                                                                    gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa                    >  2:1884347/1‑93 (MQ=255)

                                                                    gTTTGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCa                    <  1:708475/93‑1 (MQ=255)

                                                                     tttGCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAc                   >  2:364375/1‑93 (MQ=255)

                                                                        gCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAcgcg                <  2:4697857/93‑1 (MQ=255)

                                                                        gCTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCAcgcg                >  1:5650412/1‑93 (MQ=255)

                                                                         cTCATGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACgcgc               <  1:4810128/93‑1 (MQ=255)

                                                                           cATGGAAATGGGTCGCATTCGGCAACTTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCa             <  1:6086931/93‑1 (MQ=255)

                                                                            aTGGAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCCTCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAg            >  1:3383449/1‑93 (MQ=255)

                                                                              ggAAATGGGTCGCATTCTGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGtt          <  2:4413574/93‑1 (MQ=255)

                                                                               gAAATGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGttt         >  2:1362448/1‑93 (MQ=255)

                                                                                aaaTGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTc        <  2:5546191/93‑1 (MQ=255)

                                                                                 aaTGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCt       <  1:4197914/93‑1 (MQ=255)

                                                                                 aaTGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCt       <  2:4423959/93‑1 (MQ=255)

                                                                                 aaTGGGTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCt       <  2:1357035/93‑1 (MQ=255)

                                                                                    gggTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGAt    >  1:724188/1‑93 (MQ=255)

                                                                                     ggTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATc   >  1:252862/1‑93 (MQ=255)

                                                                                     ggTCGCATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATc   <  1:798768/93‑1 (MQ=255)

AAAAGTCGCCGCCCAACTCGCCATGCGCCACAATATCAACCATCTCTCCCTGGATCGGGAACTCCACGGTTTGCTCATGGAAATGGGTCGTATTCGGCAAATTGCCACAAAAATGACCATCTGCACCTAATCCCAGCACCACCAAATCCAGTCCGCCTTCACGCGCCAGTTTCTGATCA  >  NC_000913/3896517‑3896695

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`