Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,912,542 T→C D96G (GAT→GGT)  glmU ← N‑acetyl glucosamine‑1‑phosphate uridyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,912,5420TC99.6% 818.8 / ‑7.1 253D96G (GAT→GGT) glmUN‑acetyl glucosamine‑1‑phosphate uridyltransferase
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base C (161/91);  total (161/92)
Fisher's exact test for biased strand distribution p-value = 3.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 274 total aligned reads displayed.

ATGCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCATCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCTTTC  >  NC_000913/3912452‑3912631
                                                                                          |                                                                                         
aTGCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTtcacca                                                                                         <  2:2495016/93‑1 (MQ=255)
  gCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCaccatc                                                                                       <  1:2175865/93‑1 (MQ=255)
    cACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCgg                                                                                     <  1:5104071/93‑1 (MQ=255)
     aCCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGc                                                                                    >  1:206433/1‑93 (MQ=255)
      cccTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCa                                                                                   <  2:1555345/93‑1 (MQ=255)
        cTGCGGTTTAGAATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGGAGAGCATTAAAATGTCTTCACCATCGGCaaa                                                                                 >  1:5323036/1‑93 (MQ=255)
         tGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCaaag                                                                                >  2:3221832/1‑93 (MQ=255)
          tcGGTTTAGCATCACCGAGACGTTGGAGTGTTTCGACAGAGAGCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCaaaga                                                                               <  2:1638406/92‑1 (MQ=255)
          gCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCaaaga                                                                               <  1:2811643/93‑1 (MQ=255)
          gCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCaaaga                                                                               >  2:5918101/1‑93 (MQ=255)
              tttAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAgg                                                                           <  2:4108958/93‑1 (MQ=255)
               ttAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAggg                                                                          >  1:5180500/1‑92 (MQ=255)
                  gCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCg                                                                       >  1:4782648/1‑93 (MQ=255)
                    aTCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGc                                                                     >  2:2216261/1‑93 (MQ=255)
                    aTCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGc                                                                     >  1:1317793/1‑93 (MQ=255)
                    aTCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGc                                                                     >  2:4080676/1‑93 (MQ=255)
                     tCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGcc                                                                    >  2:2426504/1‑93 (MQ=255)
                       aCGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCctg                                                                  <  1:5630527/93‑1 (MQ=255)
                       aCGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCctg                                                                  >  1:386391/1‑93 (MQ=255)
                       aCGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCctg                                                                  <  1:1632358/93‑1 (MQ=255)
                         gCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCctgct                                                                >  2:2289371/1‑93 (MQ=255)
                           aGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCtgctgc                                                              >  2:5985726/1‑93 (MQ=255)
                            ggcGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgca                                                             >  2:6208775/3‑93 (MQ=255)
                            gACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgca                                                             >  2:2017451/1‑93 (MQ=255)
                            gACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgca                                                             >  2:3564352/1‑93 (MQ=255)
                            gACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgca                                                             >  2:2645914/1‑93 (MQ=255)
                            gACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgca                                                             >  1:4608964/1‑93 (MQ=255)
                            gACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgca                                                             >  1:4983432/1‑93 (MQ=255)
                            gACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgca                                                             >  2:5444414/1‑93 (MQ=255)
                            gACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgca                                                             <  1:3244791/93‑1 (MQ=255)
                             aCGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgcat                                                            <  2:1160810/93‑1 (MQ=255)
                             aCGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgcat                                                            <  1:4932883/93‑1 (MQ=255)
                              cGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGGGCGGCCTGCtgcatt                                                           >  1:6247131/1‑93 (MQ=255)
                               gCTGGAGTGTTTCGACAGAGATCTGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgcattg                                                          >  2:2135477/1‑93 (MQ=255)
                               gCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGAAAAGAAAGGTGCGGCCTGCtgcattc                                                          >  1:1692172/1‑92 (MQ=255)
                                 tGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgcattgca                                                        <  2:1484890/93‑1 (MQ=255)
                                 tGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgcattgca                                                        >  2:2798160/1‑93 (MQ=255)
                                 tGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCtgcattgca                                                        >  2:4239927/1‑93 (MQ=255)
                                   gAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATg                                                      >  2:4469858/1‑93 (MQ=255)
                                    aGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGa                                                     <  1:6037363/93‑1 (MQ=255)
                                    aGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGa                                                     >  1:2376737/1‑93 (MQ=255)
                                     gtgtTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGAc                                                    <  1:339770/93‑1 (MQ=255)
                                       gtTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGAccc                                                  <  1:2646355/93‑1 (MQ=255)
                                         ttCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGt                                                <  1:6167544/93‑1 (MQ=255)
                                              cAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCa                                           <  2:444138/93‑1 (MQ=255)
                                              cAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCa                                           >  2:1371982/1‑93 (MQ=255)
                                              cAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCa                                           <  2:1672137/93‑1 (MQ=255)
                                                gagaTCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgc                                         >  1:5450624/1‑93 (MQ=255)
                                                gagaTCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgc                                         >  2:3377930/1‑93 (MQ=255)
                                                 agaTCAGCGGCACGTCGCCTTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgct                                        <  1:3597351/93‑1 (MQ=255)
                                                 agaTCAGCGGCACGTCGCCGTAGATCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgct                                        <  1:5876888/93‑1 (MQ=255)
                                                 agaTCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgct                                        >  2:5225046/1‑93 (MQ=255)
                                                  gaTCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgctg                                       >  1:1508202/1‑93 (MQ=255)
                                                  gaTCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgctg                                       >  1:4351370/1‑93 (MQ=255)
                                                   aTCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgctgc                                      >  1:926107/1‑93 (MQ=255)
                                                    tCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAgctgct                                     >  1:3469543/1‑93 (MQ=255)
                                                     cAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGctc                                    <  1:1961071/93‑1 (MQ=255)
                                                     cAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGctc                                    <  2:1462831/93‑1 (MQ=255)
                                                     cAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGctc                                    <  2:3054273/93‑1 (MQ=255)
                                                       gCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTg                                  >  1:904803/1‑93 (MQ=255)
                                                         ggCACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGcc                                <  1:3182980/93‑1 (MQ=255)
                                                           cACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTg                              >  1:3764545/1‑93 (MQ=255)
                                                           cACGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATAACCCGTACCCAGCTGCTCTGCCTg                              >  2:6181237/1‑93 (MQ=255)
                                                            aCGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGa                             >  1:2310047/1‑93 (MQ=255)
                                                             cGTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGaa                            >  2:5777909/1‑93 (MQ=255)
                                                              gTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAg                           <  1:1774504/93‑1 (MQ=255)
                                                              gTCGCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTCCCTGAAg                           >  1:3312927/1‑93 (MQ=255)
                                                                 gCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCAc                        >  1:304744/1‑93 (MQ=255)
                                                                 gCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCAc                        <  1:687666/93‑1 (MQ=255)
                                                                 gCCGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCAc                        >  1:116168/1‑93 (MQ=255)
                                                                   cGTAGAGGATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCAccc                      >  2:5102510/1‑93 (MQ=255)
                                                                   cGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCAccc                      <  1:1394849/93‑1 (MQ=255)
                                                                   cGTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCAccc                      >  2:4878749/1‑93 (MQ=255)
                                                                    gTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCa                     >  2:4599583/1‑93 (MQ=255)
                                                                    gTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCa                     <  2:824068/93‑1 (MQ=255)
                                                                    gTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCa                     >  1:1268765/1‑93 (MQ=255)
                                                                    gTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCa                     >  2:1147184/1‑93 (MQ=255)
                                                                    gTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCa                     >  1:9014/1‑93 (MQ=255)
                                                                    gTAGAGCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCa                     >  1:3690055/1‑93 (MQ=255)
                                                                      agagCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGt                   >  2:3577550/1‑93 (MQ=255)
                                                                      agagCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGt                   <  2:1271748/93‑1 (MQ=255)
                                                                      agagCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGt                   >  1:1686720/1‑93 (MQ=255)
                                                                      agagCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGt                   >  1:3660413/1‑93 (MQ=255)
                                                                         gCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTaa                <  1:2362504/93‑1 (MQ=255)
                                                                         gCATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTaa                <  2:5636897/93‑1 (MQ=255)
                                                                          cATTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAg               >  1:1845077/1‑93 (MQ=255)
                                                                           aTTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAgg              >  2:2074693/1‑93 (MQ=255)
                                                                           aTTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAgg              >  1:1034697/1‑93 (MQ=255)
                                                                           aTTAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAgg              <  2:644750/93‑1 (MQ=255)
                                                                            ttAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGt             >  2:5866291/1‑93 (MQ=255)
                                                                            ttAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGt             <  2:380516/93‑1 (MQ=255)
                                                                             tAAAATGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGtt            >  1:3972812/1‑93 (MQ=255)
                                                                                aaTGTCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTgtc         >  1:564839/1‑93 (MQ=255)
                                                                                    tCTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCt     <  2:4390047/93‑1 (MQ=255)
                                                                                     cTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCtt    <  1:829100/93‑1 (MQ=255)
                                                                                     cTTCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCtt    <  2:6067847/93‑1 (MQ=255)
                                                                                      ttCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCttt   >  1:4460073/1‑93 (MQ=255)
                                                                                      ttCACCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCttt   >  2:2349662/1‑93 (MQ=255)
                                                                                       tcaccaTCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCTTTc  <  1:3728507/93‑1 (MQ=255)
                                                                                       tcaccaTCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCTTTc  <  2:1789258/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATGCCACCCTGCGGTTTAGCATCACGCAGACGCTGGAGTGTTTCGACAGAGATCAGCGGCACGTCGCCGTAGAGCATTAAAATGTCTTCATCATCGGCAAAGAAAGGTGCGGCCTGCTGCATTGCATGACCCGTACCCAGCTGCTCTGCCTGAAGCACCCAGTTAAGGTTGTCGTCTTTC  >  NC_000913/3912452‑3912631

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: