Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,915,043 G→C A284G (GCC→GGC)  atpG ← membrane‑bound ATP synthase, F1 sector, gamma‑subunit

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,915,0430GC99.6% 882.9 / ‑4.3 281A284G (GCC→GGC) atpGmembrane‑bound ATP synthase, F1 sector, gamma‑subunit
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (153/127);  total (154/127)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.66e-01

Only 100 of 303 total aligned reads displayed.

TTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCG  >  NC_000913/3914953‑3915132
                                                                                          |                                                                                          
ttCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGccc                                                                                          >  2:1811121/1‑93 (MQ=255)
   gACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGcccccc                                                                                       >  1:3183243/1‑93 (MQ=255)
    aCGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCg                                                                                      <  2:459560/93‑1 (MQ=255)
     cGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCga                                                                                     <  1:790763/93‑1 (MQ=255)
     cGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCga                                                                                     >  1:4185212/1‑93 (MQ=255)
       tCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCgaga                                                                                   >  2:153946/1‑93 (MQ=255)
       tCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGAGCCCCCCgcgc                                                                                   >  2:1620115/1‑90 (MQ=255)
        cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGAc                                                                                  <  1:5239901/93‑1 (MQ=255)
        cAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGAc                                                                                  >  1:5035148/1‑93 (MQ=255)
         aaCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACg                                                                                 >  2:227923/1‑93 (MQ=255)
          aCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGa                                                                                >  1:5742350/1‑93 (MQ=255)
          aCTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGa                                                                                >  1:2954171/1‑93 (MQ=255)
           cTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGAt                                                                               >  2:3655085/1‑93 (MQ=255)
           cTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGAt                                                                               <  1:4320260/93‑1 (MQ=255)
               ggCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCg                                                                           >  2:2326230/1‑93 (MQ=255)
                gcgcCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCgg                                                                          <  2:3192230/93‑1 (MQ=255)
                 cgcCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGt                                                                         <  1:2321778/93‑1 (MQ=255)
                 cgcCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGt                                                                         <  2:609144/93‑1 (MQ=255)
                   ccGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGa                                                                       >  1:2694535/1‑93 (MQ=255)
                     gATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGt                                                                     >  1:3647918/1‑93 (MQ=255)
                     gATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGt                                                                     >  2:6201001/1‑93 (MQ=255)
                     gATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGt                                                                     >  1:3763407/1‑93 (MQ=255)
                       ttACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTc                                                                   >  1:2376851/1‑93 (MQ=255)
                        tACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTcc                                                                  >  1:136918/1‑93 (MQ=255)
                        tACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTcc                                                                  >  2:5982142/1‑93 (MQ=255)
                           cTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGa                                                               <  1:3355023/93‑1 (MQ=255)
                            tGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGCTCCTGAg                                                              >  1:2563435/1‑93 (MQ=255)
                             ggACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGt                                                             >  1:4108106/1‑93 (MQ=255)
                               aCAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTaa                                                           >  2:5615378/1‑93 (MQ=255)
                               aCAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTaa                                                           <  1:1684472/93‑1 (MQ=255)
                                cAATCTTTCCAGTAGCCATCTTAAATCCTCTGCGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAAt                                                          <  1:4224176/93‑1 (MQ=255)
                                    cTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTg                                                      >  1:5410034/1‑93 (MQ=255)
                                    cTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTg                                                      <  1:681744/93‑1 (MQ=255)
                                        ccAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCt                                                  <  2:5483979/93‑1 (MQ=255)
                                          aGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGa                                                <  1:3964834/93‑1 (MQ=255)
                                          aGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGa                                                >  1:4880569/1‑93 (MQ=255)
                                            tAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACg                                              <  2:1427815/93‑1 (MQ=255)
                                            tAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACg                                              >  2:5205435/1‑93 (MQ=255)
                                                cATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCt                                         >  2:1713477/1‑93 (MQ=255)
                                                 aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCtt                                        >  1:5871469/1‑93 (MQ=255)
                                                 aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCtt                                        >  2:5151236/1‑93 (MQ=255)
                                                 aTCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCtt                                        >  2:5819027/1‑93 (MQ=255)
                                                  tCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCttt                                       >  2:4743560/1‑93 (MQ=255)
                                                    ttAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgt                                     <  2:511866/93‑1 (MQ=255)
                                                    ttAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgt                                     >  2:4039584/1‑93 (MQ=255)
                                                    ttAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgt                                     >  2:5709712/1‑93 (MQ=255)
                                                     tAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt                                    <  1:122278/93‑1 (MQ=255)
                                                     tAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt                                    >  1:1478082/1‑93 (MQ=255)
                                                     tAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt                                    <  2:3979023/93‑1 (MQ=255)
                                                     tAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgtt                                    >  2:719855/1‑93 (MQ=255)
                                                      aaaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgttg                                   <  1:5495901/93‑1 (MQ=255)
                                                      aaaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgttg                                   <  2:5642977/93‑1 (MQ=255)
                                                      aaaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTttgttg                                   <  1:4836240/93‑1 (MQ=255)
                                                      aaaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTCAGTAATGCTGGCCTGACGAGCTttgttg                                   >  1:3035887/1‑93 (MQ=255)
                                                       aaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTtgttgt                                  <  2:2436190/93‑1 (MQ=255)
                                                       aaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTtgttgt                                  >  2:1195614/1‑93 (MQ=255)
                                                       aaTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTtgttgt                                  <  2:3385261/93‑1 (MQ=255)
                                                        aTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                 <  2:85231/93‑1 (MQ=255)
                                                        aTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                 <  2:4155566/93‑1 (MQ=255)
                                                        aTCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGta                                 <  2:2174206/93‑1 (MQ=255)
                                                         tCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtat                                >  1:1055860/1‑93 (MQ=255)
                                                         tCCTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtat                                >  1:3731428/1‑93 (MQ=255)
                                                          ccTCTACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGtata                               >  2:5336638/1‑93 (MQ=255)
                                                           ctctACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAc                              >  2:2046618/1‑93 (MQ=255)
                                                            tctACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATTTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAcc                             <  1:872895/93‑1 (MQ=255)
                                                            tctACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATAcc                             >  1:2088183/1‑93 (MQ=255)
                                                             ctACGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCa                            >  2:6055442/1‑93 (MQ=255)
                                                              tACGAAATAACCTGTTTAAACCGCAGCGCCCCCCGAGACGATCTCGGTGAGATCCTGAGTAATGCTGGCCTGACGAACTTTGTTGTATAccca                           >  2:4815376/1‑91 (MQ=255)
                                                               aCGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAAc                          >  2:1915119/1‑93 (MQ=255)
                                                               aCGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAAc                          <  1:5358129/93‑1 (MQ=255)
                                                                cGAAATACCCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACt                         <  2:2736678/93‑1 (MQ=255)
                                                                cGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACt                         >  2:3000842/1‑93 (MQ=255)
                                                                cGAAATAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACt                         <  2:4649885/93‑1 (MQ=255)
                                                                  aaaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc                       <  2:5056007/93‑1 (MQ=255)
                                                                  aaaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc                       >  2:5863548/1‑93 (MQ=255)
                                                                  aaaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc                       <  1:769502/93‑1 (MQ=255)
                                                                  aaaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGc                       >  1:998585/1‑93 (MQ=255)
                                                                   aaTATCCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                      <  2:1318751/93‑1 (MQ=255)
                                                                   aaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                      >  2:3462862/1‑93 (MQ=255)
                                                                   aaTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCa                      >  1:4814260/1‑93 (MQ=255)
                                                                   aaTAACCTGTTTAAACCGCGGCGCCCCCGGGGCGGTCTCGGGGGGGTTCTTAGGAATGGTGGGCTTAAGAGCCTTTGTTTATACCCAATGCAg                     >  2:4995756/1‑93 (MQ=255)
                                                                    aTAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAg                     >  1:2651657/1‑93 (MQ=255)
                                                                     tAACCTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGc                    <  1:3884374/93‑1 (MQ=255)
                                                                        ccTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctct                 >  1:1936906/1‑93 (MQ=255)
                                                                        ccTGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGctct                 >  1:6165568/1‑93 (MQ=255)
                                                                          tGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCttt               >  2:4284889/1‑93 (MQ=255)
                                                                          tGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCttt               >  1:6077950/1‑93 (MQ=255)
                                                                          tGTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCttt               <  2:3270406/93‑1 (MQ=255)
                                                                           gTTTAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTa              >  2:2952294/1‑93 (MQ=255)
                                                                              tAAACCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATc           >  2:4939580/1‑93 (MQ=255)
                                                                               aaaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCa          >  1:5620916/1‑93 (MQ=255)
                                                                                aaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAg         <  1:3597749/93‑1 (MQ=255)
                                                                                aaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAg         >  1:2820951/1‑93 (MQ=255)
                                                                                aaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAg         <  2:1296855/93‑1 (MQ=255)
                                                                                aaCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAg         <  1:1861302/93‑1 (MQ=255)
                                                                                 aCCGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAgg        >  2:2653079/1‑93 (MQ=255)
                                                                                  ccGCGGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGc       >  1:553173/1‑93 (MQ=255)
                                                                                   cgcgGCGCCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCt      >  1:4458591/1‑93 (MQ=255)
                                                                                     cggcgcCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgc    <  1:2269050/93‑1 (MQ=255)
                                                                                      ggcgccCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTgcc   >  2:830594/1‑93 (MQ=255)
                                                                                          |                                                                                          
TTCGACGTCAACTACGGCGCCGATTACCTGGACAATCTTTCCAGTAGCCATCTTAAATCCTCTACGAAATAACCTGTTTAAACCGCGGCGGCCCCCGAGACGATCTCGGTGAGTTCCTGAGTAATGCTGGCCTGACGAGCTTTGTTGTATACCAACTGCAGCTCTTTAATCAGGCTGCCG  >  NC_000913/3914953‑3915132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: