BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,948,221	A→G	A13A (GCA→GCG)	ilvG →	acetolactate synthase II large subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,948,221	0	A	G	100.0%	694.2 / NA	216	A13A (GCA→GCG)	ilvG	acetolactate synthase II large subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (104/112); total (104/112)

Only 100 of 224 total aligned reads displayed.

TGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCT  >  NC_000913/3948131‑3948310

tGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGcgca                                                                                         >  1:3597001/1‑93 (MQ=255)

tGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGcgca                                                                                         >  1:5430115/1‑93 (MQ=255)

   aTAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAggg                                                                                      <  1:340522/93‑1 (MQ=255)

    tAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgt                                                                                     >  2:3427961/1‑93 (MQ=255)

     aaCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgtg                                                                                    <  2:5209490/93‑1 (MQ=255)

     aaCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgtg                                                                                    >  1:6226583/1‑93 (MQ=255)

      aCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgtgt                                                                                   <  2:792071/93‑1 (MQ=255)

      aCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgtgt                                                                                   >  1:4391764/1‑93 (MQ=255)

      aCAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGgtgt                                                                                   >  1:4861343/1‑93 (MQ=255)

        aGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGa                                                                                 <  1:4165122/93‑1 (MQ=255)

         gCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGaa                                                                                >  1:2200206/1‑93 (MQ=255)

         gCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGaa                                                                                <  1:525556/93‑1 (MQ=255)

         gCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGaa                                                                                <  2:307963/93‑1 (MQ=255)

           acaAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAaca                                                                              <  1:2590416/93‑1 (MQ=255)

            caAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAacac                                                                             >  1:5947423/1‑93 (MQ=255)

             aaaaTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACAcc                                                                            >  1:4232634/1‑93 (MQ=255)

              aaaTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCg                                                                           <  2:5636644/93‑1 (MQ=255)

              aaaTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCg                                                                           >  1:3366324/1‑93 (MQ=255)

                aTTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGtt                                                                         <  1:5202558/93‑1 (MQ=255)

                  tCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGtttt                                                                       >  1:2476595/1‑93 (MQ=255)

                    tGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCg                                                                     >  2:4313969/1‑93 (MQ=255)

                     gTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCgg                                                                    >  2:83785/1‑93 (MQ=255)

                      tttCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGt                                                                   <  1:647923/93‑1 (MQ=255)

                       ttCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGtt                                                                  >  1:110597/1‑93 (MQ=255)

                        tctcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTa                                                                 >  2:2436471/1‑93 (MQ=255)

                         ctcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTAt                                                                >  2:2445151/1‑93 (MQ=255)

                         ctcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTAt                                                                >  2:2973435/1‑93 (MQ=255)

                          tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               <  1:3329067/93‑1 (MQ=255)

                          tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               >  2:1145167/1‑93 (MQ=255)

                          tcAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATc                                                               <  1:2034902/93‑1 (MQ=255)

                           cAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATcc                                                              <  1:1364870/93‑1 (MQ=255)

                           cAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATcc                                                              <  1:513947/93‑1 (MQ=255)

                           cAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATcc                                                              <  2:5000163/93‑1 (MQ=255)

                            aaGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCg                                                             >  2:4001345/1‑93 (MQ=255)

                            aaGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCg                                                             <  1:1446975/93‑1 (MQ=255)

                             aGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCgg                                                            >  2:3644069/1‑93 (MQ=255)

                             aGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGCGTGAACACCGTTTTCGGTTATCCgg                                                            >  2:4509648/1‑93 (MQ=255)

                              gATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCATGGTGTGAACACCGTTTTCCGTTATCCggg                                                           >  1:2859317/1‑93 (MQ=255)

                              gATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCggg                                                           <  1:4003525/93‑1 (MQ=255)

                              gATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCggg                                                           >  1:3143838/1‑93 (MQ=255)

                              gATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCggg                                                           >  2:1370326/1‑93 (MQ=255)

                               aTTCAGGACGGGGATCTATCTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACTGTTTTCGGTTATCCGGGt                                                          <  1:5731988/93‑1 (MQ=255)

                                ttCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTg                                                         <  2:3570946/93‑1 (MQ=255)

                                  cAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGgc                                                       <  1:3183218/93‑1 (MQ=255)

                                     gACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCa                                                    >  2:3334466/1‑93 (MQ=255)

                                     gACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCa                                                    >  2:1853728/1‑93 (MQ=255)

                                     gACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGACGCa                                                    >  1:4688917/1‑93 (MQ=255)

                                      aCGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCaa                                                   <  1:4759876/93‑1 (MQ=255)

                                      aCGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCaa                                                   >  1:2701513/1‑93 (MQ=255)

                                        ggggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAAtt                                                 >  1:3832214/1‑93 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  1:1513388/93‑1 (MQ=255)

                                         gggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTa                                                <  2:2130440/93‑1 (MQ=255)

                                          ggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAt                                               <  1:420178/93‑1 (MQ=255)

                                          ggAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTAt                                               <  2:6178751/93‑1 (MQ=255)

                                           gAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATg                                              >  2:2894624/1‑93 (MQ=255)

                                           gAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATg                                              >  2:2655779/1‑93 (MQ=255)

                                           gAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATg                                              >  2:5812920/1‑93 (MQ=255)

                                            aactaactATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGc                                             <  1:2085299/93‑1 (MQ=255)

                                             actaactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACCCCGTTTTCGGTTATCCGGGTGGCGCAATTATGcc                                            <  1:4079606/93‑1 (MQ=255)

                                             actaactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGCTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGcc                                            <  1:4446252/93‑1 (MQ=255)

                                              ctaactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCg                                           >  2:5262195/1‑93 (MQ=255)

                                               taactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCgg                                          <  2:5134326/93‑1 (MQ=255)

                                                aactaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGt                                         <  2:699183/93‑1 (MQ=255)

                                                 actaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGtt                                        >  2:4609679/1‑93 (MQ=255)

                                                  ctaTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGttt                                       >  2:712115/1‑93 (MQ=255)

                                                    aTGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTAc                                     <  2:1031181/93‑1 (MQ=255)

                                                     tGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACg                                    >  2:3832098/1‑93 (MQ=255)

                                                      gAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGa                                   >  1:3469939/1‑93 (MQ=255)

                                                        aTGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATg                                 <  2:2697060/93‑1 (MQ=255)

                                                        aTGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATg                                 <  1:702713/93‑1 (MQ=255)

                                                         tGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGc                                <  1:2491370/93‑1 (MQ=255)

                                                         tGGCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGc                                <  1:1725732/93‑1 (MQ=255)

                                                          ggCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCa                               >  1:5546429/1‑93 (MQ=255)

                                                          ggCGCACAGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCa                               <  2:5541026/93‑1 (MQ=255)

                                                              cacaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGt                           >  2:2742535/1‑93 (MQ=255)

                                                               acaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTa                          <  1:385893/93‑1 (MQ=255)

                                                               acaGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTa                          <  1:1819682/93‑1 (MQ=255)

                                                                caGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTAt                         >  2:281898/1‑93 (MQ=255)

                                                                 aGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATg                        <  2:4211437/93‑1 (MQ=255)

                                                                 aGTGGGTGGTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATg                        <  1:5229100/93‑1 (MQ=255)

                                                                   tgggtggTACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAc                      <  2:4927942/93‑1 (MQ=255)

                                                                     ggtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcgg                    <  1:4843181/93‑1 (MQ=255)

                                                                     ggtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcgg                    <  2:4395225/93‑1 (MQ=255)

                                                                     ggtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcgg                    <  2:2254703/93‑1 (MQ=255)

                                                                      gtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcggc                   <  1:2498528/93‑1 (MQ=255)

                                                                      gtggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcggc                   <  1:3986953/93‑1 (MQ=255)

                                                                        ggtACATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGAcggcgg                 >  1:6058505/1‑93 (MQ=255)

                                                                            cATGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGGTTACGATGCATTGTATGACGGCGGGGTg             >  2:3142750/1‑93 (MQ=255)

                                                                             aTGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTgg            >  2:470316/1‑93 (MQ=255)

                                                                             aTGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTgg            >  1:293619/1‑93 (MQ=255)

                                                                             aTGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTgg            <  1:1743650/93‑1 (MQ=255)

                                                                             aTGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTgg            <  2:5744766/93‑1 (MQ=255)

                                                                              tGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGa           <  1:5367296/93‑1 (MQ=255)

                                                                              tGCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGa           >  1:1881293/1‑93 (MQ=255)

                                                                               gCGTTGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAg          >  1:1072979/1‑93 (MQ=255)

                                                                                  ttGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCAc       >  1:3009412/1‑93 (MQ=255)

                                                                                   tGCGGGCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACt      <  1:745944/93‑1 (MQ=255)

                                                                                      gggCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGc   <  1:2963856/93‑1 (MQ=255)

                                                                                      gggCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGc   >  2:1539694/1‑93 (MQ=255)

                                                                                       ggCGCAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCt  <  2:5892630/93‑1 (MQ=255)

TGAATAACAGCACAAAATTCTGTTTCTCAAGATTCAGGACGGGGAACTAACTATGAATGGCGCACAGTGGGTGGTACATGCGTTGCGGGCACAGGGTGTGAACACCGTTTTCGGTTATCCGGGTGGCGCAATTATGCCGGTTTACGATGCATTGTATGACGGCGGCGTGGAGCACTTGCT  >  NC_000913/3948131‑3948310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`