BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	459,477	T→C	Y456H (TAC→CAC)	lon →	ATP‑dependent protease La

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	459,477	0	T	C	100.0%	840.5 / NA	257	Y456H (TAC→CAC)	lon	ATP‑dependent protease La
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (124/133); total (124/133)

Only 100 of 278 total aligned reads displayed.

GACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATG  >  NC_000913/459387‑459566

gACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGTTGGATCCAGAGCAGAACGTAGCGTTCAGCGACcaccac                                                                                         >  2:4151638/1‑93 (MQ=255)

gACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACcaccac                                                                                         <  2:12431/93‑1 (MQ=255)

gACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACcaccac                                                                                         >  1:3940602/1‑93 (MQ=255)

  cAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCt                                                                                       >  2:5998546/1‑93 (MQ=255)

     aaTGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGa                                                                                    >  2:564555/1‑93 (MQ=255)

     aaTGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGa                                                                                    <  2:439791/93‑1 (MQ=255)

     aaTGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGa                                                                                    >  1:794841/1‑93 (MQ=255)

      aTGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGaa                                                                                   >  1:1511732/1‑93 (MQ=255)

      aTGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGaa                                                                                   >  1:2877598/1‑93 (MQ=255)

       tGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAg                                                                                  >  2:2738915/1‑93 (MQ=255)

           ttctGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGa                                                                              >  2:3452352/1‑93 (MQ=255)

           ttatGACATGCGTGGCGATCCGGCCTATGCACTGCTTGAAGTGCTGGATCAAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGa                                                                              <  1:3591046/90‑1 (MQ=255)

            tctGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGAt                                                                             <  1:733680/93‑1 (MQ=255)

             ctGACATGCGTGGCGCTCCGGCCTCTGCACTGCTTGAAGCGCTGGATCCAGAGCAGAACGTAGCGCTCAGCGACCCCCACCTGGAAGTGGAtt                                                                            <  2:4381852/93‑1 (MQ=255)

              tGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTa                                                                           <  2:1854444/93‑1 (MQ=255)

              tGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTa                                                                           >  2:5624366/1‑93 (MQ=255)

              tGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTa                                                                           >  2:2491682/1‑93 (MQ=255)

                aCATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACg                                                                         >  2:2335831/1‑93 (MQ=255)

                 cATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGa                                                                        >  2:1396389/1‑93 (MQ=255)

                   tGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGAtc                                                                      >  1:5769299/1‑93 (MQ=255)

                   tGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGAtc                                                                      >  1:1026267/1‑93 (MQ=255)

                    gCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGAtct                                                                     >  1:3206632/1‑93 (MQ=255)

                      gTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCa                                                                   <  2:4012982/93‑1 (MQ=255)

                      gTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCa                                                                   >  2:319101/1‑93 (MQ=255)

                      gTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCa                                                                   <  1:5201735/93‑1 (MQ=255)

                      gTGCCGCTCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCa                                                                   <  2:2300263/93‑1 (MQ=255)

                       tGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAg                                                                  <  1:3845479/93‑1 (MQ=255)

                       tGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAg                                                                  >  2:2643210/1‑93 (MQ=255)

                       tGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAg                                                                  >  1:5934070/1‑93 (MQ=255)

                       tGGCGACCCGGCCTCTGCACTGCGTGAAGTGCTGGAACCAGAGCAGAACGTGGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAg                                                                  <  2:665481/93‑1 (MQ=255)

                       gggCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAg                                                                  <  1:1645366/92‑1 (MQ=255)

                         gCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCg                                                                <  2:4335939/93‑1 (MQ=255)

                          ggATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGa                                                               <  1:2176641/92‑1 (MQ=255)

                          cGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGa                                                               >  1:3029257/1‑93 (MQ=255)

                          cGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGa                                                               <  2:4427126/93‑1 (MQ=255)

                           gATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGAc                                                              >  2:5228232/1‑93 (MQ=255)

                            aTCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACg                                                             >  2:5035286/1‑93 (MQ=255)

                             tCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGt                                                            >  2:2436101/1‑93 (MQ=255)

                               cGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGa                                                          >  1:554595/1‑93 (MQ=255)

                               cGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGa                                                          >  2:4731086/1‑93 (MQ=255)

                                ggCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGAt                                                         <  1:3353706/93‑1 (MQ=255)

                                ggCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGAt                                                         >  2:1221523/1‑93 (MQ=255)

                                 gCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTATCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATg                                                        >  1:4445754/1‑93 (MQ=255)

                                 gCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATg                                                        >  1:2944510/1‑93 (MQ=255)

                                 gCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATg                                                        >  1:2502911/1‑93 (MQ=255)

                                  ccTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGt                                                       >  1:638086/1‑93 (MQ=255)

                                   ctctGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGtt                                                      >  1:6205290/1‑93 (MQ=255)

                                       gCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGTTGTTTGTc                                                  <  2:6165173/93‑1 (MQ=255)

                                       gCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTc                                                  <  1:2123202/93‑1 (MQ=255)

                                        cACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTcg                                                 <  1:3108517/93‑1 (MQ=255)

                                         aCTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTcgc                                                <  2:3708662/93‑1 (MQ=255)

                                          cTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTcgcg                                               >  1:2531320/1‑93 (MQ=255)

                                           tGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGa                                              >  2:579198/1‑93 (MQ=255)

                                           tGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGa                                              >  2:235744/1‑93 (MQ=255)

                                             cTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACg                                            >  2:3573291/1‑93 (MQ=255)

                                              ttGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGt                                           >  1:4869100/1‑93 (MQ=255)

                                              ttGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGt                                           <  1:1810133/93‑1 (MQ=255)

                                               tGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTc                                          >  1:4792140/1‑93 (MQ=255)

                                                gAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCg                                         >  2:309806/1‑93 (MQ=255)

                                                  aGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGaa                                       <  2:3881545/93‑1 (MQ=255)

                                                    tGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACt                                     >  1:2770043/1‑93 (MQ=255)

                                                    tGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACt                                     <  2:3398685/93‑1 (MQ=255)

                                                    tGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACt                                     <  2:2962703/93‑1 (MQ=255)

                                                     gCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTc                                    <  2:5464386/93‑1 (MQ=255)

                                                      cTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTcc                                   >  2:3121487/1‑93 (MQ=255)

                                                       tGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCTGCGACGTGATGTTTGGCGCGACGTCGAACTcct                                  >  2:4084780/1‑92 (MQ=255)

                                                        ggATCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCAt                                 <  2:6037646/93‑1 (MQ=255)

                                                          aTCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGa                               >  1:6192975/1‑93 (MQ=255)

                                                           tCCAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGaa                              >  1:3746895/1‑93 (MQ=255)

                                                             cAGAGCAGAACGTGGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACa                            >  2:6018045/1‑93 (MQ=255)

                                                             cAGAGCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACa                            <  2:2024534/93‑1 (MQ=255)

                                                               gagCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACAtt                          <  1:467959/93‑1 (MQ=255)

                                                               gagCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACAtt                          >  1:4335655/1‑93 (MQ=255)

                                                                agCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTc                         <  2:1684041/93‑1 (MQ=255)

                                                                agCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTc                         <  2:1495095/93‑1 (MQ=255)

                                                                 gCAGAACGTAGCGTTCAGCGTCCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTcc                        <  2:193439/93‑1 (MQ=255)

                                                                 gCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTcc                        <  1:1106084/93‑1 (MQ=255)

                                                                 gCAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTcc                        <  1:1345601/93‑1 (MQ=255)

                                                                  cAGAACGTAGCGTTCAGCGCCCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCg                       <  1:2409918/93‑1 (MQ=255)

                                                                  cAGAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCg                       <  1:1551084/93‑1 (MQ=255)

                                                                  cAGAACGTAGCGTCCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCg                       <  1:4010138/93‑1 (MQ=255)

                                                                    gAACGTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGc                     >  1:5132867/1‑93 (MQ=255)

                                                                        gTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCg                 >  2:6238646/1‑93 (MQ=255)

                                                                        gTAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCg                 >  1:5434598/1‑93 (MQ=255)

                                                                         tAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgc                >  2:4188492/1‑93 (MQ=255)

                                                                         tAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgc                >  2:4676422/1‑93 (MQ=255)

                                                                         tAGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgc                <  2:4976006/93‑1 (MQ=255)

                                                                          aGCGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgct               <  1:6100020/93‑1 (MQ=255)

                                                                            cGTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgctgc             <  1:2190303/93‑1 (MQ=255)

                                                                             gTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgctgct            >  1:5004620/1‑93 (MQ=255)

                                                                             gTTCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCgctgct            <  1:4969263/93‑1 (MQ=255)

                                                                              ttCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGctgctg           <  1:5591981/93‑1 (MQ=255)

                                                                               tCAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTgg          <  2:807999/93‑1 (MQ=255)

                                                                                cAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGa         <  2:2139386/93‑1 (MQ=255)

                                                                                cAGCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGa         <  2:2705352/93‑1 (MQ=255)

                                                                                  gCGACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATc       <  1:996913/93‑1 (MQ=255)

                                                                                    gACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGt     >  1:4776496/1‑93 (MQ=255)

                                                                                    gACCACCACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGt     <  1:1151709/93‑1 (MQ=255)

                                                                                     accaccaccTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTa    <  1:4188063/93‑1 (MQ=255)

                                                                                      ccaccaCCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTAt   >  1:1755522/1‑93 (MQ=255)

GACAAAATGTCTTCTGACATGCGTGGCGATCCGGCCTCTGCACTGCTTGAAGTGCTGGATCCAGAGCAGAACGTAGCGTTCAGCGACCACTACCTGGAAGTGGATTACGATCTCAGCGACGTGATGTTTGTCGCGACGTCGAACTCCATGAACATTCCGGCACCGCTGCTGGATCGTATG  >  NC_000913/459387‑459566

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`