BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,951,082	C→T	intergenic (+46/‑50)	ilvE → / → ilvD	branched‑chain amino‑acid aminotransferase/dihydroxyacid dehydratase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,951,082	0	C	T	100.0%	943.6 / NA	253	intergenic (+46/‑50)	ilvE/ilvD	branched‑chain amino‑acid aminotransferase/dihydroxyacid dehydratase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (129/124); total (129/124)

Only 100 of 266 total aligned reads displayed.

GAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGTGGGCCCA  >  NC_000913/3950992‑3951171

gAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGatac                                                                                         >  2:360541/1‑93 (MQ=255)

 aaaCCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGatacg                                                                                        <  2:1324327/93‑2 (MQ=255)

 aaaCCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACt                                                                                        <  2:2291052/93‑1 (MQ=255)

  aaCCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTg                                                                                       >  1:2397468/1‑93 (MQ=255)

    ccGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTggg                                                                                     <  1:5130240/93‑1 (MQ=255)

    ccGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTggg                                                                                     <  1:2617084/93‑1 (MQ=255)

     cGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATATAAAAAATAGGACGGTAAGCACCGACCCATTTACGAGACAGATACTGGGa                                                                                    >  2:6164120/1‑93 (MQ=255)

     cGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGa                                                                                    >  1:1031390/1‑93 (MQ=255)

     cGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGa                                                                                    <  1:3807318/93‑1 (MQ=255)

     cGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGa                                                                                    >  2:3482049/1‑93 (MQ=255)

     cGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGa                                                                                    <  1:1394885/93‑1 (MQ=255)

      gAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAg                                                                                   >  2:6031654/1‑93 (MQ=255)

      gAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAg                                                                                   >  2:2474731/1‑93 (MQ=255)

      gAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAg                                                                                   <  1:5660903/93‑1 (MQ=255)

       aaGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGt                                                                                  >  1:3720646/1‑93 (MQ=255)

        aGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGta                                                                                 <  1:151405/93‑1 (MQ=255)

        aGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGta                                                                                 <  1:3031192/93‑1 (MQ=255)

        aGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGAACGCACCGTCCCATTTACGAGACAGATACTGGGAGta                                                                                 >  2:2009633/1‑93 (MQ=255)

         gATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGtaa                                                                                >  1:126409/1‑93 (MQ=255)

          aTAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGtaaa                                                                               <  1:142078/93‑1 (MQ=255)

            aaaTGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGtaaata                                                                             <  1:5344783/93‑1 (MQ=255)

            aaaTGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGtaaata                                                                             <  1:4774264/93‑1 (MQ=255)

             aaTGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGtaaataa                                                                            >  1:2377316/1‑93 (MQ=255)

             aaTGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGtaaataa                                                                            >  1:4085846/1‑93 (MQ=255)

              aTGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGtaaataaa                                                                           >  1:3958845/1‑93 (MQ=255)

               tGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAg                                                                          <  2:2742883/93‑1 (MQ=255)

                 gggCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTa                                                                        <  1:2258593/93‑1 (MQ=255)

                 gggCTGGTGAGATCAAGTTAATCAATAAATACAAAAAAGGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTa                                                                        <  1:6232801/93‑1 (MQ=255)

                  ggCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTAt                                                                       >  2:864152/1‑93 (MQ=255)

                     tGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGcc                                                                    <  1:2177958/93‑1 (MQ=255)

                      ggTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCt                                                                   >  1:5512528/1‑93 (MQ=255)

                       gTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTa                                                                  >  1:1273204/1‑93 (MQ=255)

                        ttAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTaa                                                                 <  2:363875/93‑1 (MQ=255)

                        ttAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTaa                                                                 >  1:3882550/1‑93 (MQ=255)

                        ttAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTaa                                                                 <  1:5392397/93‑1 (MQ=255)

                        ttAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTaa                                                                 <  1:4441099/93‑1 (MQ=255)

                         tAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAg                                                                <  1:4077427/93‑1 (MQ=255)

                         tAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAg                                                                <  2:4161504/93‑1 (MQ=255)

                          aGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGt                                                               >  2:3409745/1‑93 (MQ=255)

                          aGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGt                                                               <  2:4413448/93‑1 (MQ=255)

                           gATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTa                                                              >  2:637234/1‑93 (MQ=255)

                            aTCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTAc                                                             <  1:3496439/93‑1 (MQ=255)

                             tCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTAcc                                                            <  1:4331944/93‑1 (MQ=255)

                               aaGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGt                                                          >  1:3237234/1‑93 (MQ=255)

                               aaGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGt                                                          <  2:4680957/93‑1 (MQ=255)

                                aGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATGCTGGGAGTAAATAAAGTATGCCTAAGTACCGtt                                                         <  1:5710967/93‑1 (MQ=255)

                                 gTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTc                                                        >  2:5582444/1‑93 (MQ=255)

                                 attAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTc                                                        <  2:3789538/92‑1 (MQ=255)

                                  ttAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTcc                                                       <  2:1665950/93‑1 (MQ=255)

                                     aTCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGcc                                                    <  2:5656857/93‑1 (MQ=255)

                                     aTCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGcc                                                    >  2:5831966/1‑93 (MQ=255)

                                       cAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGccac                                                  >  2:5106264/1‑93 (MQ=255)

                                        aataaataCAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGccacc                                                 >  2:277203/1‑93 (MQ=255)

                                         ataaataCAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGccacca                                                >  1:1713460/1‑93 (MQ=255)

                                           aaataCAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGccaccacc                                              <  1:6043810/93‑1 (MQ=255)

                                            aataCAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGccaccacca                                             >  2:54393/1‑93 (MQ=255)

                                            aataCAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGccaccacca                                             >  2:3988964/1‑93 (MQ=255)

                                             ataCAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCcaccaccac                                            <  1:4043762/93‑1 (MQ=255)

                                              taCAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACt                                           <  2:2350376/93‑1 (MQ=255)

                                               aCAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTc                                          <  1:1654172/93‑1 (MQ=255)

                                                   aaaaTGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATgg                                      <  2:5332162/93‑1 (MQ=255)

                                                    aaaTGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCCCTCATGGt                                     <  2:1892706/93‑1 (MQ=255)

                                                    aaaTGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGt                                     <  1:734441/93‑1 (MQ=255)

                                                    aaaTGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGt                                     >  1:204746/1‑93 (MQ=255)

                                                     aaTGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTc                                    >  1:85883/1‑93 (MQ=255)

                                                      aTGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCg                                   <  2:1997416/93‑1 (MQ=255)

                                                       tGGGACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCga                                  >  1:1952588/1‑92 (MQ=255)

                                                         gggcGGCACGCACCGTCCCAGTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTaa                                <  1:1062593/90‑1 (MQ=255)

                                                          gACGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAat                               >  2:1730530/1‑93 (MQ=255)

                                                           aCGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAata                              <  1:767641/93‑1 (MQ=255)

                                                           aCGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAata                              <  1:3609873/93‑1 (MQ=255)

                                                           aCGGCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAata                              >  1:1726037/1‑93 (MQ=255)

                                                             ggCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATg                            <  1:3661381/93‑1 (MQ=255)

                                                             ggCACGCACCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATg                            <  1:4959798/93‑1 (MQ=255)

                                                              gcacgcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATgg                           <  2:5721894/93‑1 (MQ=255)

                                                              gcacgcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATgg                           <  1:946725/93‑1 (MQ=255)

                                                              gcacgcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATgg                           <  1:2853832/93‑1 (MQ=255)

                                                              gcacgcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATgg                           >  2:5472817/1‑93 (MQ=255)

                                                               cacgcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGc                          <  2:3707253/93‑1 (MQ=255)

                                                                  gcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCggg                       <  2:3882413/93‑1 (MQ=255)

                                                                  gcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCggg                       <  1:4613043/93‑1 (MQ=255)

                                                                  gcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCggg                       >  2:2979062/1‑93 (MQ=255)

                                                                  gcacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCggg                       >  1:894779/1‑93 (MQ=255)

                                                                   cacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCgggg                      >  1:5961091/1‑92 (MQ=255)

                                                                   cacCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGt                      <  2:4272135/93‑1 (MQ=255)

                                                                    acCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCggggg                     >  2:732204/1‑91 (MQ=255)

                                                                    acCGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCggggg                     >  2:5182100/1‑91 (MQ=255)

                                                                     ccGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCgggggg                    >  2:3107074/1‑90 (MQ=255)

                                                                      cGTCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCt                   <  1:1855359/93‑1 (MQ=255)

                                                                        tCCCATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCg                 >  2:2822024/1‑93 (MQ=255)

                                                                         cccATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGt                <  1:3547857/93‑1 (MQ=255)

                                                                         cccATTGACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGt                <  2:1128666/93‑1 (MQ=255)

                                                                          ccATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTg               >  2:5030884/1‑93 (MQ=255)

                                                                          ccATTTACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGCTCGTg               >  2:4770930/1‑93 (MQ=255)

                                                                             tttACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTgcgc            <  1:5830924/93‑1 (MQ=255)

                                                                             tttACGAGACAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCgcgcgc            >  1:209485/1‑93 (MQ=255)

                                                                                  gagaCAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGTgg       <  1:2934746/93‑1 (MQ=255)

                                                                                  gagaCAGATACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGTgg       <  2:4568766/93‑1 (MQ=255)

                                                                                   agacagatACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGTGCGGTggg      >  1:4421269/1‑93 (MQ=255)

                                                                                       agataCTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGGGGTCGTGCGCTGTggggcgc  >  2:1465319/1‑89 (MQ=255)

GAAACCGAAGATAAATGGGGCTGGTTAGATCAAGTTAATCAATAAATACAAAAAATGGGACGGCACGCACCGTCCCATTTACGAGACAGACACTGGGAGTAAATAAAGTATGCCTAAGTACCGTTCCGCCACCACCACTCATGGTCGTAATATGGCGGGTGCTCGTGCGCTGTGGGCCCA  >  NC_000913/3950992‑3951171

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`