BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,955,315	G→A	L43F (CTC→TTC)	ilvY ←	IlvY

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,955,315	0	G	A	100.0%	867.5 / NA	232	L43F (CTC→TTC)	ilvY	IlvY
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (119/113); total (119/113)

Only 100 of 238 total aligned reads displayed.

ACAGCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAGATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATGGCGGCTTTCC  >  NC_000913/3955225‑3955403

aCAGCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGTCTGACCGAAAt                                                                                        >  1:6234230/1‑93 (MQ=255)

aCAGCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAAt                                                                                        >  1:5991864/1‑93 (MQ=255)

aCAGCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAAt                                                                                        <  2:5863559/93‑1 (MQ=255)

 cAGCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAAtc                                                                                       <  1:155243/93‑1 (MQ=255)

 cAGCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACAGAAAtc                                                                                       >  2:2805805/1‑93 (MQ=255)

  aGCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAAtct                                                                                      <  2:969100/93‑1 (MQ=255)

   gCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAAtctt                                                                                     <  1:3005594/93‑1 (MQ=255)

    cGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAAtcttc                                                                                    >  1:3711200/1‑93 (MQ=255)

    cGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAAtcttc                                                                                    <  2:354650/93‑1 (MQ=255)

     gTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAAtcttct                                                                                   <  1:18979/93‑1 (MQ=255)

      tttGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATcttctt                                                                                  >  1:4934938/1‑93 (MQ=255)

      tttGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATcttctt                                                                                  >  2:1645230/1‑93 (MQ=255)

      tttGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATcttctt                                                                                  >  2:4337467/1‑93 (MQ=255)

      tttGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATcttctt                                                                                  <  2:2239387/93‑1 (MQ=255)

        tGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTcc                                                                                <  2:2900739/93‑1 (MQ=255)

         gCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCa                                                                               <  2:2520208/93‑1 (MQ=255)

          cTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAg                                                                              <  1:5805549/93‑1 (MQ=255)

           tGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAgg                                                                             >  1:3395562/1‑93 (MQ=255)

           tGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAgg                                                                             >  2:1379380/1‑93 (MQ=255)

            tgtcGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGgc                                                                            <  1:5966074/90‑1 (MQ=255)

            gggCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGgc                                                                            >  1:2785854/1‑93 (MQ=255)

            gggCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGgc                                                                            >  2:3001050/1‑93 (MQ=255)

               cGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCt                                                                         <  2:4765127/93‑1 (MQ=255)

               cGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCt                                                                         <  1:648226/93‑1 (MQ=255)

                gAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTg                                                                        >  2:1329386/1‑93 (MQ=255)

                    aCGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATc                                                                    <  1:4307539/93‑1 (MQ=255)

                    aCGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATc                                                                    <  2:5461634/93‑1 (MQ=255)

                      gcgcAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTg                                                                  >  1:5894609/1‑93 (MQ=255)

                       cgcAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGc                                                                 <  2:3120140/93‑1 (MQ=255)

                       cgcACCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGc                                                                 <  2:5118965/93‑1 (MQ=255)

                        gcAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGcc                                                                >  2:4504078/1‑93 (MQ=255)

                        gcAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGcc                                                                <  1:5109006/93‑1 (MQ=255)

                         cAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCg                                                               >  1:570705/1‑93 (MQ=255)

                          aGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGt                                                              <  2:872251/93‑1 (MQ=255)

                            ctctTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTga                                                            <  1:2280851/93‑1 (MQ=255)

                              ctTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTgaga                                                          <  1:1510669/93‑1 (MQ=255)

                              ctTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTgaga                                                          >  2:1073901/1‑93 (MQ=255)

                              ctTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTgaga                                                          <  2:3854454/93‑1 (MQ=255)

                               ttCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGagag                                                         <  1:2173164/93‑1 (MQ=255)

                                   cccGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTg                                                     >  1:464060/1‑93 (MQ=255)

                                    ccGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTgg                                                    >  2:5735489/1‑93 (MQ=255)

                                     cGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGa                                                   >  1:1149667/1‑93 (MQ=255)

                                     cGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGa                                                   <  2:2700551/93‑1 (MQ=255)

                                     cGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGa                                                   <  1:4050345/93‑1 (MQ=255)

                                     cGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGa                                                   <  1:141542/93‑1 (MQ=255)

                                       cTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATg                                                 >  2:5949023/1‑93 (MQ=255)

                                        ttCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATgg                                                >  2:3393096/1‑93 (MQ=255)

                                        ttCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATgg                                                >  2:6263075/1‑93 (MQ=255)

                                         tcagtcagCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATggg                                               >  1:2933316/1‑93 (MQ=255)

                                            gtcagCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTa                                            <  1:2225678/93‑1 (MQ=255)

                                             tcagCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTaa                                           <  1:1393207/93‑1 (MQ=255)

                                             tcagCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTaa                                           >  2:4108776/1‑93 (MQ=255)

                                              cagCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAAc                                          <  1:1030346/93‑1 (MQ=255)

                                               agCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACg                                         >  1:723079/1‑93 (MQ=255)

                                               agCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACg                                         <  2:1459797/93‑1 (MQ=255)

                                                gCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGt                                        <  2:617472/93‑1 (MQ=255)

                                                gCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGt                                        >  1:3475612/1‑93 (MQ=255)

                                                gCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGt                                        >  1:1230231/1‑93 (MQ=255)

                                                gCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGt                                        >  1:3765582/1‑93 (MQ=255)

                                                 cGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTg                                       <  2:2362698/93‑1 (MQ=255)

                                                  gTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGc                                      >  1:3309259/1‑93 (MQ=255)

                                                   tCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCa                                     <  2:1171157/93‑1 (MQ=255)

                                                    cACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCAt                                    <  2:6294119/93‑1 (MQ=255)

                                                     acagTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATc                                   <  1:2953437/90‑1 (MQ=255)

                                                     aCCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATc                                   >  2:5306171/1‑93 (MQ=255)

                                                        gTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGcc                                <  1:2658882/93‑1 (MQ=255)

                                                        gTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGcc                                >  2:2162792/1‑93 (MQ=255)

                                                        gTGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGcc                                >  1:4611887/1‑93 (MQ=255)

                                                         tGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGccc                               <  2:1808959/93‑1 (MQ=255)

                                                         tGCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGccc                               <  1:2131479/93‑1 (MQ=255)

                                                          gCGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGAATCGCCcg                              >  2:1551238/1‑93 (MQ=255)

                                                           cGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgc                             >  1:4374934/1‑93 (MQ=255)

                                                           cGGTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgc                             >  2:4255889/1‑93 (MQ=255)

                                                            ggTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgcg                            <  1:4482553/93‑1 (MQ=255)

                                                             gTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgcgc                           >  1:4832158/1‑93 (MQ=255)

                                                             gTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgcgc                           >  2:3082317/1‑93 (MQ=255)

                                                             gTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgcgc                           >  2:3347242/1‑93 (MQ=255)

                                                             gTTATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgcgc                           >  1:4070918/1‑93 (MQ=255)

                                                              ttATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgcgcg                          >  1:939501/1‑93 (MQ=255)

                                                              ttATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCcgcgcg                          >  1:1812955/1‑93 (MQ=255)

                                                               tATCGCGCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCgcgcgc                         >  1:4542025/1‑93 (MQ=255)

                                                                  cgcgCACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATAGGCTAACGTGCATCGCCCGCGCGCTGc                      <  1:986087/93‑1 (MQ=255)

                                                                   gcgcACAAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCg                     <  2:4306300/93‑1 (MQ=255)

                                                                      cacaAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACCTGCATCGCCCGCGCGCTGCGGcc                  >  2:4185067/1‑93 (MQ=255)

                                                                       acaAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCa                 >  2:4452676/1‑93 (MQ=255)

                                                                        caAACAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCaa                >  2:743085/1‑93 (MQ=255)

                                                                          aaCAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCaaaa              <  2:3691187/93‑1 (MQ=255)

                                                                          aaCAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCaaaa              >  2:2576776/1‑93 (MQ=255)

                                                                           aCAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAAt             >  2:5248405/1‑93 (MQ=255)

                                                                            cAGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATg            >  1:1949950/1‑93 (MQ=255)

                                                                             aGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCTGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATgg           <  1:3242184/93‑1 (MQ=255)

                                                                             aGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATgg           <  1:2299266/93‑1 (MQ=255)

                                                                             aGCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATgg           >  1:2324416/1‑93 (MQ=255)

                                                                              gCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATggc          <  1:156373/93‑1 (MQ=255)

                                                                              gCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATggc          <  2:6057491/93‑1 (MQ=255)

                                                                              gCGGCTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATggc          <  1:540401/93‑1 (MQ=255)

                                                                                  cTGACCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATGGCGGCt      <  1:925394/93‑1 (MQ=255)

                                                                                     aCCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATGGCGGCTTTc   <  2:4978614/93‑1 (MQ=255)

                                                                                     aCCGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATGGCGGCTTTc   >  1:3261285/1‑93 (MQ=255)

                                                                                      ccGAAATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATGGCGGCTTTcc  <  1:574944/93‑1 (MQ=255)

ACAGCGTTTGCTGGGCGAAAACGCGCAGCTCTTCGCCCGCTTCAGTCAGCGTCACCGTGCGGTTATCGCGCACAAACAGCGGCTGACCGAGATCTTCTTCCAGGCGCTGAATCTGCCGTGAGAGCGTGGATGGGCTAACGTGCATCGCCCGCGCGCTGCGGCCAAAATGGCGGCTTTCC  >  NC_000913/3955225‑3955403

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`