| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 3,958,261 | T→C | intergenic (‑830/‑31) | ppiC ← / → rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,958,261 | 0 | T | C | 99.3% | 477.0 / NA | 152 | intergenic (‑830/‑31) | ppiC/rep | peptidyl‑prolyl cis‑trans isomerase C/rep helicase |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (80/70); total (82/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 185 total aligned reads displayed.
TTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CT‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCC > NC_000913/3958171‑3958346 | cGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑cc‑cccc > 1:3908619/1‑93 (MQ=255) cttctCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑cc‑cccccccg > 1:866272/1‑91 (MQ=255) tctctctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCg < 2:5461188/93‑1 (MQ=255) ctccctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGa < 1:4469877/93‑1 (MQ=255) tctctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGaa < 1:2366751/93‑1 (MQ=255) tctctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAg > 2:6033048/1‑93 (MQ=255) ctctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAg < 2:5180754/93‑1 (MQ=255) ctctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGa < 2:3098484/93‑1 (MQ=255) tctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGa < 2:2286477/93‑1 (MQ=255) tctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGa > 2:1054372/1‑93 (MQ=255) tctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGa < 1:1258884/93‑1 (MQ=255) tctGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑CACC‑CCCCCCGGTCGAAGa > 2:1028135/1‑93 (MQ=255) tctGATTTAAACACCCGCAGCCAACCGGTTAGCGGCTTACCCGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGa < 2:3615661/93‑1 (MQ=255) tGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGAtt > 1:508031/1‑93 (MQ=255) atatAAACATCCGCAGCCAACCGGTTAGCGACTTACACGCGGTCACATACAAATGTGATTTTACTACAAA‑C‑C‑CC‑CCCCCCGTTCGAAGATTGa < 2:2096987/90‑1 (MQ=255) tAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAgga > 1:4938165/1‑91 (MQ=255) aaaCATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGaaa > 2:4980981/1‑93 (MQ=255) aaCATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAAt > 2:942261/1‑93 (MQ=255) aCATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATa < 2:6030622/93‑1 (MQ=255) aCATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCCAAGATTGAGCAATa > 2:1975650/1‑93 (MQ=255) cATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATac < 2:5343172/93‑1 (MQ=255) aTCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATaca > 1:1652218/1‑93 (MQ=255) aTCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATacac > 2:4689968/1‑93 (MQ=255) tCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGCTTGGGAAATaaac > 2:394526/1‑93 (MQ=255) tCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATacac < 1:3734966/93‑1 (MQ=255) ccGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACAcc < 2:4651119/93‑1 (MQ=255) cGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCt < 1:5693859/93‑1 (MQ=255) cGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTa < 2:865186/93‑1 (MQ=255) gCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTAt > 1:4219998/1‑93 (MQ=255) ccAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTa < 2:3698042/92‑1 (MQ=255) cAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTAt < 2:1093673/93‑1 (MQ=255) aGCCAACGGGTTAGCGGCTTAAACGCGGTCACATTCAAATGCGATTCTTGTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATg < 2:1827057/93‑1 (MQ=255) gCCAACCGTTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGGTCGAAGATTGCGGAACAAACCTAttgg > 2:6138860/1‑90 (MQ=255) gCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCg > 2:2726824/1‑93 (MQ=255) ccAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCCTTCGAAGATTGAGCAAAACACCTATGCg > 1:342205/1‑93 (MQ=255) aaCCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTGGAAGATTGGGGAAAACACCCATGCG‑tt > 1:1334185/1‑92 (MQ=255) aaCCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGGAATACACCTATGCG‑Tc > 2:5643724/1‑93 (MQ=255) aaCCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑Tc < 2:80487/93‑1 (MQ=255) ggTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTaaa > 1:5843968/1‑93 (MQ=255) gTTAGCGGCTTACACGCGGTCCCATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAAc < 2:1906464/93‑1 (MQ=255) gTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAAc > 2:3182243/1‑93 (MQ=255) gTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAAc < 2:1672674/93‑1 (MQ=255) gTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAAc > 1:1000689/1‑93 (MQ=255) ttAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTGCGAATGTTTAGCACTACACCTCTGCG‑GCTAAAcc > 2:2488272/1‑93 (MQ=255) ttAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAAccc < 2:1620070/93‑1 (MQ=255) tAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAAccc < 1:2268492/93‑1 (MQ=255) tggggCTTACCCGCGGTCACATTCAAATGCGATTTTTCCACAAA‑C‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAAcccc < 2:3261606/90‑1 (MQ=255) aGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAAcccc < 2:5936340/93‑1 (MQ=255) gCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCg < 2:4049102/93‑1 (MQ=255) cGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCgg > 2:1937524/1‑93 (MQ=255) ggCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATAAACCTATGCG‑GCTAAACCCCGGc > 2:5125829/1‑93 (MQ=255) ggCTTACACGCGGTCACATCCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGc > 1:1925852/1‑93 (MQ=255) gCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGGca > 2:4722769/1‑93 (MQ=255) cTTACACGTGGTCACATTCTAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGACCAAAAAACCAATGCG‑TCTAAACCCCCGCca > 2:6111400/1‑93 (MQ=255) cTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCca < 1:6225452/93‑1 (MQ=255) ttACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAAATTAGGCAAT‑CAACCATTCG‑GTTTAACCCCGGCcaaa > 2:4922912/1‑92 (MQ=255) ttACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCcaac > 1:3046043/1‑93 (MQ=255) tACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGCGTGAGCAATACACCTATTCG‑TCTTAACCCCGGCcaac > 1:5563755/1‑93 (MQ=255) tACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CCCCCCCCCGTTCGAAGATTAGGCAATACACCAATCCG‑TCTAAACCCCGCCcaaa > 1:1796894/1‑92 (MQ=255) cacGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCCAAGGTTGAGGAATACAACTATGGGTTCAAAACCCCGCCcaacaa > 2:2048958/1‑93 (MQ=255) acGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCcaacaaca < 1:5333865/93‑1 (MQ=255) cgcgGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCcaacaacaa < 1:5984605/93‑1 (MQ=255) gcgGTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCCAAAATTGAGCAATACACCTATGGG‑TCTAAACCCCGGCcaacaacaa > 1:1578422/1‑93 (MQ=255) ggTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGc > 1:4015284/1‑93 (MQ=255) ggTCACATTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGc < 1:1035171/93‑1 (MQ=255) gTCACATTCAAATGCGATTCTGCTAC‑AACC‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCt < 1:4439140/93‑1 (MQ=255) gTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CCCCCCCCCGTTCGAAAATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAAAAACAAGCt > 2:2678001/1‑93 (MQ=255) gTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCccacaaaaaaaag > 1:4651800/1‑89 (MQ=255) cacaTTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGt < 1:2736851/93‑1 (MQ=255) cacaTTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTc < 1:36829/93‑1 (MQ=255) cacaTTAAAATGCGATTCTGCTAC‑AACC‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGt < 2:426950/93‑1 (MQ=255) acaTGCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTc < 1:2120860/93‑1 (MQ=255) caTTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATTCG‑TCTAAACCCCGGCCAACAACAAGCTgccc > 1:4770735/1‑90 (MQ=255) caTTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCg < 1:3496004/93‑1 (MQ=255) caTTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGa > 1:5114309/1‑93 (MQ=255) aTTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGa < 1:1184064/93‑1 (MQ=255) aTTCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCCTTCGAAGATTTAGGAATACACCCATGCG‑TCTAAAACCCCGCCAAAAACAAAATGTcca > 2:5484135/1‑91 (MQ=255) ttCAAATGCGATTCTGCTACAAA‑C‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGaa < 1:5919984/93‑1 (MQ=255) tCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAAt < 1:1892477/93‑1 (MQ=255) tCAAATGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAAt < 1:1881089/93‑1 (MQ=255) tCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAAtt < 1:5485509/93‑1 (MQ=255) tCAAATGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAAtt < 2:1540721/93‑1 (MQ=255) cAAATGCGATTCTGCTAC‑AACC‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAAtt < 2:5161682/93‑1 (MQ=255) aaTGCGATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGt < 1:143601/93‑1 (MQ=255) aTGCGATTCTGCTAC‑AACC‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGt < 2:4577520/93‑1 (MQ=255) aTGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCATTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGt > 1:2830557/1‑93 (MQ=255) tGCGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGtt < 2:2859425/93‑1 (MQ=255) cGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTAc < 1:3151731/93‑1 (MQ=255) cGATTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTAc > 1:930036/1‑93 (MQ=255) gATTCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCg < 2:477979/93‑1 (MQ=255) aTTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCg < 2:2934293/93‑1 (MQ=255) aTTCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCg > 1:2116777/1‑93 (MQ=255) ttCTGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCgg < 2:3500917/93‑1 (MQ=255) ttCTGCTAC‑AA‑T‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGc > 1:3348598/1‑93 (MQ=255) tGCTAC‑AACC‑C‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGccc < 1:4596565/93‑1 (MQ=255) tGCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGccc < 1:3095879/93‑1 (MQ=255) gCTAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGcccc > 1:1824497/1‑93 (MQ=255) cTAC‑AA‑T‑C‑CCCCCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAAAAACCAGCTGTCGAATTTGTTACCCGccccc > 1:2560929/1‑92 (MQ=255) tAC‑AA‑TCC‑CC‑CCCCCCGTTCGAAGATTGAGCAAAACACCTATTCG‑TCTCAACCCCGGCCCAAAACAAGCCATCTAATTCGTTACACGCCcctc > 2:3680265/1‑92 (MQ=255) tAC‑AA‑T‑C‑C‑‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCcctgcc > 1:6194062/1‑93 (MQ=255) | TTCGGTCTTCTCTCTCTGATTTAAACATCCGCAGCCAACCGGTTAGCGGCTTACACGCGGTCACATTCAAATGCGATTCTGCTAC‑AA‑T‑C‑CT‑CCCCCCGTTCGAAGATTGAGCAATACACCTATGCG‑TCTAAACCCCGGCCAACAACAAGCTGTCGAATTCGTTACCGGCCCCTGCC > NC_000913/3958171‑3958346 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |