BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	3,961,966	A→G	intergenic (‑122/+14)	gppA ← / ← rhlB	guanosine pentaphosphatase/putative ATP‑dependent RNA helicase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	3,961,966	0	A	G	100.0%	863.5 / NA	263	intergenic (‑122/+14)	gppA/rhlB	guanosine pentaphosphatase/putative ATP‑dependent RNA helicase
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (135/128); total (135/128)

Only 100 of 268 total aligned reads displayed.

GCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTATGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGC  >  NC_000913/3961876‑3962055

  tGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGAc                                                                                       >  2:3175095/1‑93 (MQ=255)

     aTTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtt                                                                                    <  1:1289785/93‑1 (MQ=255)

      ttCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAttt                                                                                   >  2:6219025/1‑93 (MQ=255)

       tCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtttt                                                                                  >  1:2347915/1‑93 (MQ=255)

        cTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAttttt                                                                                 <  1:734401/93‑1 (MQ=255)

        cTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAttttt                                                                                 >  1:2046036/1‑93 (MQ=255)

         tttCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtttttt                                                                                >  1:5853867/1‑93 (MQ=255)

         tttCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACAtttttt                                                                                <  1:4808075/93‑1 (MQ=255)

           tCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttat                                                                              <  2:3331121/93‑1 (MQ=255)

           tCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttat                                                                              <  1:5409792/93‑1 (MQ=255)

           tCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttat                                                                              >  2:4367277/1‑93 (MQ=255)

           tCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttat                                                                              <  2:5393220/93‑1 (MQ=255)

            cACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttatt                                                                             <  1:324738/93‑1 (MQ=255)

             aCCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttattt                                                                            >  2:2161201/1‑93 (MQ=255)

             aCCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttattt                                                                            >  2:5506768/1‑93 (MQ=255)

             aCCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttattt                                                                            <  1:790494/93‑1 (MQ=255)

              ccTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttattta                                                                           >  2:2840644/1‑93 (MQ=255)

              ccTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTtttattta                                                                           >  2:3902564/1‑93 (MQ=255)

               cTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTaa                                                                          <  1:5596712/93‑1 (MQ=255)

               cTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTaa                                                                          <  1:5454523/93‑1 (MQ=255)

               cTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTaa                                                                          <  1:4595522/93‑1 (MQ=255)

                tGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAc                                                                         >  2:1249613/1‑93 (MQ=255)

                 gAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAAcc                                                                        <  1:5945633/93‑1 (MQ=255)

                   aTCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGAGTGACATTTTTTATTTAACCTg                                                                      >  1:6110253/1‑93 (MQ=255)

                    tCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGa                                                                     <  2:6306635/93‑1 (MQ=255)

                      aCTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAac                                                                   <  2:277081/93‑1 (MQ=255)

                      aCTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAac                                                                   <  1:4953837/93‑1 (MQ=255)

                      aCTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAac                                                                   >  2:1484566/1‑93 (MQ=255)

                      aCTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAac                                                                   >  2:3712123/1‑93 (MQ=255)

                           ctacAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAacgacga                                                              <  2:3556667/93‑1 (MQ=255)

                              cAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAAcgacgacga                                                           >  2:6128033/1‑93 (MQ=255)

                               aGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGAt                                                          <  1:552403/93‑1 (MQ=255)

                               aGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGAt                                                          <  2:2717036/93‑1 (MQ=255)

                                gTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGAtt                                                         <  2:5769199/93‑1 (MQ=255)

                                 tAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTa                                                        <  1:537180/93‑1 (MQ=255)

                                 tAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTa                                                        >  1:1978034/1‑93 (MQ=255)

                                 tAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTa                                                        <  1:5730844/93‑1 (MQ=255)

                                 tAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTa                                                        <  2:3054153/93‑1 (MQ=255)

                                 tAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTa                                                        <  1:216711/93‑1 (MQ=255)

                                 tAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTa                                                        <  1:708101/93‑1 (MQ=255)

                                  aaGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAc                                                       <  1:3343270/93‑1 (MQ=255)

                                  aaGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAc                                                       <  1:6285553/93‑1 (MQ=255)

                                  aaGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAc                                                       <  1:3794572/93‑1 (MQ=255)

                                   aGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcg                                                      >  1:4386689/1‑93 (MQ=255)

                                   aGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcg                                                      >  2:2919745/1‑93 (MQ=255)

                                    gCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcgc                                                     >  2:568749/1‑93 (MQ=255)

                                    gCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcgc                                                     >  2:5130223/1‑93 (MQ=255)

                                    gCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTAcgc                                                     >  2:1760055/1‑93 (MQ=255)

                                        aTCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAg                                                 >  2:1376301/1‑93 (MQ=255)

                                        aTCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAg                                                 >  1:3987764/1‑93 (MQ=255)

                                         tCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGCACGACGACGATTACGCGGAgc                                                >  2:3720230/1‑93 (MQ=255)

                                         tCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAgc                                                <  2:2886817/93‑1 (MQ=255)

                                          cGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAgcg                                               >  2:4758494/1‑93 (MQ=255)

                                            ggATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGcc                                             <  1:3825605/93‑1 (MQ=255)

                                            ggATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGcc                                             >  2:4116550/1‑93 (MQ=255)

                                              attcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAg                                           <  2:1650017/93‑1 (MQ=255)

                                               ttcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGt                                          >  1:4034535/1‑93 (MQ=255)

                                               ttcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGt                                          >  1:2281513/1‑93 (MQ=255)

                                                tcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTa                                         >  2:1173693/1‑93 (MQ=255)

                                                tcattcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTa                                         <  1:3126832/93‑1 (MQ=255)

                                                  attcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacg                                       >  1:4133913/1‑93 (MQ=255)

                                                   ttcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacga                                      >  2:1841718/1‑93 (MQ=255)

                                                   ttcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacga                                      <  2:4859831/93‑1 (MQ=255)

                                                   ttcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacga                                      <  1:2968053/93‑1 (MQ=255)

                                                   ttcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacga                                      >  1:906485/1‑93 (MQ=255)

                                                   ttcTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacga                                      >  1:2657764/1‑93 (MQ=255)

                                                     ctctTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTacgacg                                    <  2:230568/93‑1 (MQ=255)

                                                       ctTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGAcgcg                                  <  1:5772719/93‑1 (MQ=255)

                                                       ctTGCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGAcgcg                                  >  1:1713385/1‑93 (MQ=255)

                                                          gCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGAc                               >  2:3801387/1‑93 (MQ=255)

                                                          gCCATCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGAc                               >  2:405859/1‑93 (MQ=255)

                                                             aTCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAt                            >  2:2484497/1‑93 (MQ=255)

                                                             aTCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAt                            <  2:1589483/93‑1 (MQ=255)

                                                              tCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAtt                           >  2:5002583/1‑93 (MQ=255)

                                                              tCTTGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCAtt                           >  1:165995/1‑93 (MQ=255)

                                                                ttGATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGc                         >  2:2275230/1‑93 (MQ=255)

                                                                  gATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCt                       <  2:2677691/93‑1 (MQ=255)

                                                                  gATACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCt                       >  1:3485845/1‑93 (MQ=255)

                                                                   aTACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCtg                      >  2:1914/1‑93 (MQ=255)

                                                                    tACAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCtgt                     >  1:3779667/1‑93 (MQ=255)

                                                                     aCAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCtgtg                    <  1:1888690/93‑1 (MQ=255)

                                                                     aCAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCtgtg                    <  1:2527820/93‑1 (MQ=255)

                                                                      cAGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTgc                   <  1:1000611/93‑1 (MQ=255)

                                                                       aGTTTGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTgcg                  >  1:2571196/1‑93 (MQ=255)

                                                                         tttGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGcgcg                >  2:3519537/1‑93 (MQ=255)

                                                                         tttGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGcgcg                >  1:2882616/1‑93 (MQ=255)

                                                                          ttGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCgg               <  1:135956/93‑1 (MQ=255)

                                                                          ttGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCgg               <  2:2026365/93‑1 (MQ=255)

                                                                           tGAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCggg              <  2:782011/93‑1 (MQ=255)

                                                                            gAATGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCggga             >  2:5554615/1‑92 (MQ=255)

                                                                             aaTGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGgcg            >  1:4465979/1‑93 (MQ=255)

                                                                             aaTGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGgcg            >  2:2060019/1‑93 (MQ=255)

                                                                              aTGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGgcgc           <  1:158001/93‑1 (MQ=255)

                                                                               tGATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGcgcg          <  2:4175447/93‑1 (MQ=255)

                                                                                gATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGt         >  2:4281128/1‑93 (MQ=255)

                                                                                gATTTTGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGt         <  1:963150/93‑1 (MQ=255)

                                                                                  ttttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGa       >  2:5918230/1‑93 (MQ=255)

                                                                                    ttGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAgg     >  1:5216601/1‑93 (MQ=255)

                                                                                     tGAGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGgc    <  1:4222757/93‑1 (MQ=255)

                                                                                       aGTGTGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGgcgc  <  2:345749/93‑1 (MQ=255)

GCTGCATTCTTTCACCTGAATCACTTACTACAGTAAGCTCATCGGGATTCATTCTCTTGCCATCTTGATACAGTTTGAATGATTTTGAGTATGACATTTTTTATTTAACCTGAACGACGACGATTACGCGGAGCGCCAGTACGACGCGGACCATTGCCTGTGCGCGGGCGCGTGAGGCGC  >  NC_000913/3961876‑3962055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`