BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	477,992	A→G	intergenic (‑145/+13)	ylaB ← / ← ylaC	hypothetical protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	477,992	0	A	G	100.0%	831.2 / NA	251	intergenic (‑145/+13)	ylaB/ylaC	hypothetical protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (118/133); total (118/133)

Only 100 of 268 total aligned reads displayed.

TGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCATTTTTT  >  NC_000913/477902‑478081

tggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGtgtg                                                                                         <  2:5365995/93‑1 (MQ=255)

tggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGtgtg                                                                                         >  1:5443948/1‑93 (MQ=255)

 ggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGgtgtgt                                                                                        <  1:3731969/93‑1 (MQ=255)

 ggAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGgtgtgt                                                                                        >  1:5483714/1‑93 (MQ=255)

    gaTAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAc                                                                                     >  1:4124769/1‑93 (MQ=255)

      tAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAcgc                                                                                   >  1:3164595/1‑91 (MQ=255)

      tAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAccc                                                                                   <  1:5994830/93‑1 (MQ=255)

      tAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAAccc                                                                                   >  1:3775563/1‑93 (MQ=255)

       aaGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCt                                                                                  <  1:5912616/93‑1 (MQ=255)

               agagCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAg                                                                          <  1:5110257/93‑1 (MQ=255)

                gagCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGa                                                                         >  2:4635934/1‑93 (MQ=255)

                  gCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATg                                                                       >  1:1266839/1‑93 (MQ=255)

                   cTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGt                                                                      <  2:2557336/93‑1 (MQ=255)

                   cTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGt                                                                      >  1:5710796/1‑93 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGtt                                                                     >  2:5045753/1‑93 (MQ=255)

                    tGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGtt                                                                     <  1:338335/93‑1 (MQ=255)

                     ggTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTg                                                                    <  1:496926/93‑1 (MQ=255)

                     ggTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTg                                                                    >  1:1005780/1‑93 (MQ=255)

                        aTTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGAtt                                                                 <  1:746369/93‑1 (MQ=255)

                        aTTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGAtt                                                                 >  1:788937/1‑93 (MQ=255)

                         tttCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTc                                                                >  1:2094733/1‑93 (MQ=255)

                          ttCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCg                                                               <  2:962863/93‑1 (MQ=255)

                           tCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCgg                                                              <  2:3922969/93‑1 (MQ=255)

                            cATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGgc                                                             >  2:1495195/1‑93 (MQ=255)

                            cATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGgc                                                             >  1:3343937/1‑93 (MQ=255)

                             aTGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCTCAGAGCTATACGCTTGGTGTGTAACCCTAACTTAAGATGTTGATTCGgcg                                                            <  2:3351810/93‑1 (MQ=255)

                             aTGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGgcg                                                            <  1:32512/93‑1 (MQ=255)

                               gAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGcgcg                                                          >  2:1573571/1‑93 (MQ=255)

                                aaGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcga                                                         <  2:2271601/93‑1 (MQ=255)

                                 aGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgag                                                        <  2:6257247/93‑1 (MQ=255)

                                   tGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagcg                                                      >  1:2187137/1‑93 (MQ=255)

                                   tGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCgcgagcg                                                      >  2:526288/1‑93 (MQ=255)

                                      tGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg                                                   >  1:2246910/1‑93 (MQ=255)

                                      tGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAgg                                                   >  2:5883566/1‑93 (MQ=255)

                                          tGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaa                                               >  1:6234192/1‑93 (MQ=255)

                                           ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaa                                              <  1:2819742/93‑1 (MQ=255)

                                           ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaa                                              >  2:4894421/1‑93 (MQ=255)

                                           ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaa                                              <  1:2508028/93‑1 (MQ=255)

                                           ggAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaa                                              >  2:440212/1‑93 (MQ=255)

                                            gAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaaa                                             >  1:3316063/1‑93 (MQ=255)

                                             aaaCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTaaaaa                                            >  1:5211308/1‑93 (MQ=255)

                                              aaCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAat                                           <  2:4429677/93‑1 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          >  2:4524712/1‑93 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          <  1:1854128/93‑1 (MQ=255)

                                               aCGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAata                                          <  1:1665240/93‑1 (MQ=255)

                                                cGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAatat                                         <  1:896305/93‑1 (MQ=255)

                                                 gATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATc                                        >  1:6114760/1‑93 (MQ=255)

                                                 gATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATc                                        <  1:4239100/93‑1 (MQ=255)

                                                 gATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATc                                        >  1:2987541/1‑93 (MQ=255)

                                                 gATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATc                                        >  1:1340488/1‑93 (MQ=255)

                                                 gATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATc                                        <  1:5239313/93‑1 (MQ=255)

                                                  aTCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCg                                       <  1:456796/93‑1 (MQ=255)

                                                    cATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTa                                     >  2:5638989/1‑93 (MQ=255)

                                                     aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaa                                    >  1:4848518/1‑93 (MQ=255)

                                                     aTTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaa                                    <  1:1770365/93‑1 (MQ=255)

                                                      ttGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaa                                   <  2:5129028/93‑1 (MQ=255)

                                                      ttGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaa                                   >  2:4843801/1‑93 (MQ=255)

                                                      ttGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaa                                   >  2:4368422/1‑93 (MQ=255)

                                                       tGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaa                                  >  2:360963/1‑93 (MQ=255)

                                                        gTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTaaaaa                                 <  2:4970470/93‑1 (MQ=255)

                                                         tCATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAg                                <  2:2405182/93‑1 (MQ=255)

                                                          cATTTGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGa                               <  2:3756310/93‑1 (MQ=255)

                                                            tttGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACa                             >  1:3459866/1‑93 (MQ=255)

                                                             ttGACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAg                            <  1:1748002/93‑1 (MQ=255)

                                                               gACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGtt                          <  1:206743/93‑1 (MQ=255)

                                                               gACCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGtt                          <  2:882725/93‑1 (MQ=255)

                                                                aCCAGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTc                         <  2:1416748/93‑1 (MQ=255)

                                                                   aGGCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCAcc                      <  2:3184292/93‑1 (MQ=255)

                                                                    ggCGCAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCt                     >  1:5022394/1‑93 (MQ=255)

                                                                       gcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa                  <  1:4325367/93‑1 (MQ=255)

                                                                       gcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa                  >  2:2022284/1‑93 (MQ=255)

                                                                       gcAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTa                  <  2:2139232/93‑1 (MQ=255)

                                                                        cAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTAc                 <  2:1291799/93‑1 (MQ=255)

                                                                        cAGAGCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTAc                 <  2:4508363/93‑1 (MQ=255)

                                                                         agagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCCCCTTTACg                <  2:6201003/93‑1 (MQ=255)

                                                                         agagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACg                >  1:1027919/1‑93 (MQ=255)

                                                                         agagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACg                >  2:1234306/1‑93 (MQ=255)

                                                                          gagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACgg               >  1:1602295/1‑93 (MQ=255)

                                                                          gagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACgg               >  1:453831/1‑93 (MQ=255)

                                                                          gagCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACgg               >  1:104472/1‑93 (MQ=255)

                                                                           agCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa              >  1:5835742/1‑93 (MQ=255)

                                                                           agCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa              <  2:1890383/93‑1 (MQ=255)

                                                                           agCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa              <  2:1622873/93‑1 (MQ=255)

                                                                           agCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGa              <  2:1149078/93‑1 (MQ=255)

                                                                            gCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGAc             >  2:3045228/1‑93 (MQ=255)

                                                                            gCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGAc             <  1:2710224/93‑1 (MQ=255)

                                                                            gCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGAc             >  2:4210291/1‑93 (MQ=255)

                                                                            gCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGAc             >  1:4563082/1‑93 (MQ=255)

                                                                            gCTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAAACAGTTCACCTTTACGGAc             >  1:5682992/1‑93 (MQ=255)

                                                                             cTTTACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACg            <  2:1737238/93‑1 (MQ=255)

                                                                              tttACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGa           >  1:983714/1‑93 (MQ=255)

                                                                              tttACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGa           <  1:5542000/93‑1 (MQ=255)

                                                                               ttACGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGAt          <  2:144302/93‑1 (MQ=255)

                                                                                 aCGCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCa        <  2:2491177/93‑1 (MQ=255)

                                                                                   gCCTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtt      <  2:3451488/93‑1 (MQ=255)

                                                                                    ccTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAttt     <  1:2355029/93‑1 (MQ=255)

                                                                                    ccTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAttt     <  1:1237628/93‑1 (MQ=255)

                                                                                     cTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtttt    <  1:1955259/93‑1 (MQ=255)

                                                                                     cTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtttt    >  1:3154977/1‑93 (MQ=255)

                                                                                     cTGGTGTGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCAtttt    >  2:1819660/1‑93 (MQ=255)

TGGAGATAAGGAGGTAGAGCTGGTATTTCATGAAGTGATGGGTGGAAACGATCATTGTCATTTGACCAGGCGCAGAGCTTTACGCCTGGTATGTAACCCTAACTTAAGATGTTGATTCGGCGCGAGCGAGGGTAAAAATATCGTAAAAAGACAGTTCACCTTTACGGACGATCATTTTTT  >  NC_000913/477902‑478081

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`