Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 3,991,539 T→C N45S (AAT→AGT) 
I26T (ATT→ACT) 
cyaY ←
b3808 →
hypothetical protein
hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,991,5390TC100.0% 869.1 / NA 263N45S (AAT→AGT) 
I26T (ATT→ACT) 
cyaY
b3808
hypothetical protein
hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (127/136);  total (127/136)

Only 100 of 273 total aligned reads displayed.

CCTTTCAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTC  >  NC_000913/3991449‑3991628
                                                                                          |                                                                                         
ccTTTCAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACtc                                                                                         <  1:1003007/93‑1 (MQ=255)
ccTTTCAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACtc                                                                                         <  2:3212708/93‑1 (MQ=255)
  tttCAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACtctc                                                                                       >  1:1280618/1‑93 (MQ=255)
  tttCAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACtctc                                                                                       >  2:3600750/1‑93 (MQ=255)
  tttCAGGTCAAAATGGTAGCCGCCCTGTTTGGCTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACtctc                                                                                       <  2:155849/93‑1 (MQ=255)
    tCAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCaa                                                                                     <  1:1415711/93‑1 (MQ=255)
    tCAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCaa                                                                                     <  1:851682/93‑1 (MQ=255)
     cAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCaaa                                                                                    <  2:2899095/93‑1 (MQ=255)
      aGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGTCACTCTCCAAg                                                                                   >  1:3063601/1‑93 (MQ=255)
      aGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAg                                                                                   >  2:2430071/1‑93 (MQ=255)
        gTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGt                                                                                 >  1:2517887/1‑93 (MQ=255)
        gTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGt                                                                                 <  1:709769/93‑1 (MQ=255)
        gTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGt                                                                                 >  1:3751357/1‑93 (MQ=255)
          cAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTaa                                                                               <  1:1925715/93‑1 (MQ=255)
          cAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTaa                                                                               >  2:2659917/1‑93 (MQ=255)
           aaaaTGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAAt                                                                              <  2:5955327/93‑1 (MQ=255)
             aaTGGTAGCCGCCTTGTTTGGTGGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATgg                                                                            <  1:51294/93‑1 (MQ=255)
             aaTGGTAGCCGCCCTGTTTGGTGGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATgg                                                                            <  1:776084/93‑1 (MQ=255)
               tGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTc                                                                          <  2:2040836/93‑1 (MQ=255)
               tGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTc                                                                          <  2:5452647/93‑1 (MQ=255)
               tGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTc                                                                          >  1:3038068/1‑93 (MQ=255)
                gttAGCCGCCCTGTTGGTTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCa                                                                         <  2:794832/91‑1 (MQ=255)
                 gTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTATTGGTCAg                                                                        >  1:2631741/1‑93 (MQ=255)
                 gTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAg                                                                        >  1:3454485/1‑93 (MQ=255)
                 gTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAg                                                                        >  1:5844811/1‑93 (MQ=255)
                 gTAGCCGCCCTGTTTGGTGGCCAGCCATGCCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAg                                                                        <  1:6123652/93‑1 (MQ=255)
                   aGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTa                                                                      <  2:4314610/93‑1 (MQ=255)
                   aGCCGCCCTGTTTGATTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTa                                                                      <  2:2546957/93‑1 (MQ=255)
                    gccgccCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGGTTTTGCTGCCACTCTCAAAGGTAATGGTCAGTAc                                                                     >  1:46228/1‑93 (MQ=255)
                    gcccccCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTAc                                                                     <  2:5711952/93‑1 (MQ=255)
                     ccgccCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTAcg                                                                    <  2:6237067/93‑1 (MQ=255)
                       gccCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTAcgcc                                                                  >  1:3783259/1‑93 (MQ=255)
                       gccCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTAcgcc                                                                  >  2:4001523/1‑93 (MQ=255)
                        cccTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTAcgccg                                                                 >  1:4387409/1‑93 (MQ=255)
                        cccTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTAcgccg                                                                 >  1:4917913/1‑93 (MQ=255)
                         ccTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTAcgccgc                                                                >  2:2976724/1‑93 (MQ=255)
                          cTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACgccgcc                                                               >  2:3280130/1‑93 (MQ=255)
                           tgtttgttTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGccgccg                                                              <  1:5747320/93‑1 (MQ=255)
                            ttttGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGt                                                             <  2:4626317/92‑1 (MQ=255)
                                ggTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGAt                                                         >  2:1723075/1‑93 (MQ=255)
                                  ttcccagccaTACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGAttt                                                       <  2:3461640/90‑1 (MQ=255)
                                  ttGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGAttt                                                       <  2:2924250/93‑1 (MQ=255)
                                   tcccagccaTACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTc                                                      <  2:4793902/91‑1 (MQ=255)
                                     ccagccaTACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGc                                                    >  2:209168/1‑93 (MQ=255)
                                       agccaTACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAg                                                  <  1:1803173/93‑1 (MQ=255)
                                        gccaTACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGACTTCGCAGt                                                 <  2:6117908/93‑1 (MQ=255)
                                          caTACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCg                                               >  2:3577193/1‑93 (MQ=255)
                                           aTACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGa                                              >  2:578840/1‑93 (MQ=255)
                                            tcccTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGat                                             <  1:3343945/91‑1 (MQ=255)
                                              ccTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGatat                                           >  2:6004073/1‑93 (MQ=255)
                                               cTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATc                                          >  1:1506679/1‑93 (MQ=255)
                                               cTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATc                                          >  2:2379326/1‑93 (MQ=255)
                                               cTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATc                                          >  2:1646465/1‑93 (MQ=255)
                                               cTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATc                                          <  1:1331178/93‑1 (MQ=255)
                                                 ggTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGc                                        <  1:2390792/93‑1 (MQ=255)
                                                 ggTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGc                                        <  1:5477327/93‑1 (MQ=255)
                                                  gTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCt                                       <  2:5322307/93‑1 (MQ=255)
                                                  gTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCt                                       <  2:2226319/93‑1 (MQ=255)
                                                  gTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCt                                       <  2:4847619/93‑1 (MQ=255)
                                                  gTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCt                                       <  1:2875375/93‑1 (MQ=255)
                                                   tGCAGCGGCTCCTGGCGTTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTg                                      <  2:2715119/93‑1 (MQ=255)
                                                    gCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGt                                     <  1:6245623/93‑1 (MQ=255)
                                                    gCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGt                                     <  1:3966335/93‑1 (MQ=255)
                                                       gCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGc                                  >  1:4085618/1‑93 (MQ=255)
                                                       gCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGc                                  >  1:5668886/1‑93 (MQ=255)
                                                        cGGCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGcc                                 <  2:3655504/93‑1 (MQ=255)
                                                         ggCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCa                                <  1:6084240/93‑1 (MQ=255)
                                                         ggCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCa                                <  1:5949662/93‑1 (MQ=255)
                                                         ggCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCa                                <  2:386402/93‑1 (MQ=255)
                                                          gCTCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCAt                               >  1:1873274/1‑93 (MQ=255)
                                                            tCCTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATcc                             <  1:4339649/93‑1 (MQ=255)
                                                             ctgggCGGTTGATAATTATTTTGCTGCCACTCTCAAAGGTAACGGTCAGTACGCCGCCTTTGATTTCGCAGTCGATATCGCTGTCGCCATccc                            <  1:52286/90‑1 (MQ=255)
                                                              cTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCa                           <  2:2787931/93‑1 (MQ=255)
                                                              cTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCa                           >  2:834014/1‑93 (MQ=255)
                                                              cTGGCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCa                           <  1:5330391/93‑1 (MQ=255)
                                                                ggCGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgt                         <  1:5056575/93‑1 (MQ=255)
                                                                  cGGTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtca                       <  2:927301/93‑2 (MQ=255)
                                                                   ggTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcat                      >  1:1089238/1‑91 (MQ=255)
                                                                   ggTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcat                      >  1:5630212/1‑91 (MQ=255)
                                                                    gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                     >  1:213732/1‑93 (MQ=255)
                                                                    gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                     <  2:3120027/93‑1 (MQ=255)
                                                                    gTTGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAgtcatc                     <  1:2997058/93‑1 (MQ=255)
                                                                     ttGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATcc                    <  1:4193030/93‑1 (MQ=255)
                                                                      tGATAATGATTTTGCTGTCACTCTCAAAGGTAACGGTCAGTACGCCGCCGTTGATGGCGTAGTCGATATCTCTGTCGCCATCCCAGTCATCCa                   >  2:6304089/1‑93 (MQ=255)
                                                                      tGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCa                   <  2:4179804/93‑1 (MQ=255)
                                                                      tGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCa                   <  2:4471221/93‑1 (MQ=255)
                                                                      tGATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCa                   <  2:2326188/93‑1 (MQ=255)
                                                                       gATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAg                  >  2:404394/1‑93 (MQ=255)
                                                                       gATAATGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAg                  <  1:2460832/93‑1 (MQ=255)
                                                                          aaTGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCg               >  2:5556179/1‑93 (MQ=255)
                                                                            tGATTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGtt             >  1:3603412/1‑93 (MQ=255)
                                                                              aTTTTGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttct           >  1:2227772/1‑93 (MQ=255)
                                                                                tttGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttcttc         <  1:508062/93‑1 (MQ=255)
                                                                                tttGCTGCCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGttcttc         <  1:2693711/93‑1 (MQ=255)
                                                                                  tgctgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCaa       >  2:2438621/1‑93 (MQ=255)
                                                                                   gctgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAAt      <  2:5006918/93‑1 (MQ=255)
                                                                                    ctgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATg     >  1:4515403/1‑93 (MQ=255)
                                                                                     tgcCACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATgg    >  2:3408403/1‑93 (MQ=255)
                                                                                       ccACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTc  <  2:1040592/93‑1 (MQ=255)
                                                                                       ccACTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCATCCAGGCGTTCTTCAATGGTc  <  2:2584561/93‑1 (MQ=255)
                                                                                          |                                                                                         
CCTTTCAGGTCAAAATGGTAGCCGCCCTGTTTGGTTGCCAGCCATACCTGGTGCAGCGGCTCCTGGCGGTTGATAATGATTTTGCTGCCATTCTCAAAGGTAATGGTCAGTACGCCGCCGTTGATTTCGCAGTCGATATCGCTGTCGCCATCCCAGTCGTCCAGGCGTTCTTCAATGGTC  >  NC_000913/3991449‑3991628

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: