BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	482,211	T→C	T473A (ACC→GCC)	acrB ←	acridine efflux pump

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	482,211	0	T	C	100.0%	654.4 / NA	201	T473A (ACC→GCC)	acrB	acridine efflux pump
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (104/97); total (104/97)

Only 100 of 206 total aligned reads displayed.

CTTTGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGTAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGA  >  NC_000913/482121‑482300

 tttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAAt                                                                                        >  1:1530864/1‑93 (MQ=255)

 tttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAAt                                                                                        <  1:5669837/93‑1 (MQ=255)

 tttGGCAATCAGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAAt                                                                                        >  1:2792576/1‑93 (MQ=255)

  ttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATa                                                                                       <  2:5712498/93‑1 (MQ=255)

  ttGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATa                                                                                       >  2:3382060/1‑93 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     <  1:4422059/93‑1 (MQ=255)

    ggCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATaga                                                                                     >  2:3246766/1‑93 (MQ=255)

     gCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATagag                                                                                    <  1:3833803/93‑1 (MQ=255)

       aaTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGaa                                                                                  >  2:1224630/1‑93 (MQ=255)

       aaTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGaa                                                                                  >  1:4233052/1‑93 (MQ=255)

       aaTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGaa                                                                                  >  2:2721225/1‑93 (MQ=255)

       aaTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGaa                                                                                  >  2:5165321/1‑93 (MQ=255)

        aTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAAc                                                                                 <  2:1589925/93‑1 (MQ=255)

        aTCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAAc                                                                                 <  1:3397461/93‑1 (MQ=255)

          cGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTg                                                                               <  1:5527867/93‑1 (MQ=255)

           ggTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGa                                                                              <  2:2180304/93‑1 (MQ=255)

             tttCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACg                                                                            <  1:1033658/93‑1 (MQ=255)

                cAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgata                                                                         <  2:640701/93‑1 (MQ=255)

                 aGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatag                                                                        >  1:5789535/1‑93 (MQ=255)

                  gCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgataga                                                                       <  2:4600962/93‑1 (MQ=255)

                    aTGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatagata                                                                     >  1:898269/1‑93 (MQ=255)

                    aTGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatagata                                                                     <  1:5964977/93‑1 (MQ=255)

                    aTGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatagata                                                                     <  2:3676677/93‑1 (MQ=255)

                    aTGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatagata                                                                     <  1:4649823/93‑1 (MQ=255)

                    aTGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACgatagata                                                                     <  1:4024110/93‑1 (MQ=255)

                     tggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACACTGGCAATAGAGCACTCACGatcgatag                                                                    >  1:2066968/1‑93 (MQ=255)

                     tggtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGatagatag                                                                    <  1:5044601/93‑1 (MQ=255)

                       gtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCa                                                                  >  2:1789248/1‑93 (MQ=255)

                       gtggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCa                                                                  >  2:4800888/1‑93 (MQ=255)

                        tggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCAc                                                                 <  1:406625/93‑1 (MQ=255)

                        tggCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCAc                                                                 >  2:5752306/1‑93 (MQ=255)

                           cacaAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAg                                                              >  2:4172338/1‑93 (MQ=255)

                              aaaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAg                                                           >  2:2702617/1‑93 (MQ=255)

                              aaaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAg                                                           >  2:3893513/1‑93 (MQ=255)

                              aaaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAg                                                           >  1:3176199/1‑93 (MQ=255)

                               aaGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGa                                                          >  2:4617299/1‑93 (MQ=255)

                                agagCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGaa                                                         <  2:2003815/93‑1 (MQ=255)

                                 gagCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAAc                                                        <  1:840250/93‑1 (MQ=255)

                                   gCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCg                                                      >  1:1289771/1‑93 (MQ=255)

                                      ggAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCa                                                   >  1:2708445/1‑93 (MQ=255)

                                       gAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCaa                                                  >  2:3737802/1‑93 (MQ=255)

                                        aGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCaaa                                                 <  1:972900/93‑1 (MQ=255)

                                         gTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaag                                                <  2:3629634/93‑1 (MQ=255)

                                         gTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaag                                                <  1:3934148/93‑1 (MQ=255)

                                            aGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAaagaag                                             >  2:4454688/1‑93 (MQ=255)

                                             ggATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAgg                                            >  2:445288/1‑93 (MQ=255)

                                             ggATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAgg                                            >  2:2930676/1‑93 (MQ=255)

                                                  aaCGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATc                                       <  1:4111418/93‑1 (MQ=255)

                                                   aCGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCg                                      <  1:2504374/93‑1 (MQ=255)

                                                    cGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCgg                                     <  1:3695270/93‑1 (MQ=255)

                                                     gCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGt                                    <  1:804449/93‑1 (MQ=255)

                                                     gCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGt                                    >  1:4894683/1‑93 (MQ=255)

                                                      ccaccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTa                                   >  2:5892937/1‑93 (MQ=255)

                                                      ccaccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTa                                   >  1:237177/1‑93 (MQ=255)

                                                      ccaccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTa                                   >  2:2612839/1‑93 (MQ=255)

                                                       caccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTAc                                  >  1:1366628/1‑93 (MQ=255)

                                                       caccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTAc                                  <  2:5777634/93‑1 (MQ=255)

                                                        accaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACg                                 >  2:4078225/1‑93 (MQ=255)

                                                        accaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACg                                 >  1:263426/1‑93 (MQ=255)

                                                        accaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACg                                 >  1:4991756/1‑93 (MQ=255)

                                                         ccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGa                                >  2:5451124/1‑93 (MQ=255)

                                                         ccaGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGa                                >  1:4194969/1‑93 (MQ=255)

                                                          caGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGaa                               <  1:4757086/93‑1 (MQ=255)

                                                          caGTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGaa                               >  1:2155703/1‑93 (MQ=255)

                                                            gTACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATa                             >  2:3506238/1‑93 (MQ=255)

                                                             tACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAc                            >  2:4354638/1‑93 (MQ=255)

                                                             tACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAc                            <  1:2235189/93‑1 (MQ=255)

                                                             tACCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAc                            <  2:1469519/93‑1 (MQ=255)

                                                              aCCGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAcc                           <  2:2771548/93‑1 (MQ=255)

                                                                cGACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccgc                         >  1:3289338/1‑93 (MQ=255)

                                                                 gACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccgcc                        >  2:3727719/1‑93 (MQ=255)

                                                                 gACAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccgcc                        >  2:1056483/1‑93 (MQ=255)

                                                                  aCAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATAccgccg                       >  1:2897547/1‑93 (MQ=255)

                                                                   cAGCGCCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGa                      <  1:191732/93‑1 (MQ=255)

                                                                     gcgcCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACa                    >  2:4946708/1‑93 (MQ=255)

                                                                     gcgcCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACa                    <  2:5551674/93‑1 (MQ=255)

                                                                      cgcCATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAg                   >  1:5245878/1‑93 (MQ=255)

                                                                        ccATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTa                 >  1:1749230/1‑93 (MQ=255)

                                                                        ccATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAATa                 <  1:4370957/93‑1 (MQ=255)

                                                                        ccATTGCTAAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTa                 >  2:6145293/1‑93 (MQ=255)

                                                                         cATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTAc                >  1:2994920/1‑93 (MQ=255)

                                                                         cATTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTAc                >  2:6076689/1‑93 (MQ=255)

                                                                          aTTGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTAcc               >  1:4335359/1‑93 (MQ=255)

                                                                            tGCTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCAt             >  1:6253385/1‑93 (MQ=255)

                                                                              cTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcg           >  2:5343032/1‑93 (MQ=255)

                                                                              cTGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcg           >  1:3086287/1‑93 (MQ=255)

                                                                               tGAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcgc          >  1:6112428/1‑93 (MQ=255)

                                                                                gAAACAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATcgcg         >  2:2356080/1‑93 (MQ=255)

                                                                                 aaaCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGa        <  1:613076/93‑1 (MQ=255)

                                                                                 aaaCAATAGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGa        <  1:3681150/93‑1 (MQ=255)

                                                                                  aaCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGAt       <  2:3180253/93‑1 (MQ=255)

                                                                                  aaCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGAt       >  1:843585/1‑93 (MQ=255)

                                                                                   aCAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATa      >  2:3152678/1‑93 (MQ=255)

                                                                                    cAATGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATAc     <  1:126096/93‑1 (MQ=255)

                                                                                    cAATGGCAATAGAGAACGGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATAc     <  1:1149308/93‑1 (MQ=255)

                                                                                     aaTGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATAcc    >  2:4997958/1‑93 (MQ=255)

                                                                                     aaTGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATAcc    >  2:1024530/1‑93 (MQ=255)

                                                                                      aTGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATAcca   >  2:3785115/1‑92 (MQ=255)

                                                                                      aTGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCg   >  2:2261269/1‑93 (MQ=255)

                                                                                       tGGCAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGa  >  2:3942206/1‑93 (MQ=255)

CTTTGGCAATCGGTTTCAGCATGGTGGCACAAAGAGCTGGAGTCAGGATCAACGCCACCAGTACCGACAGCGCCATTGCTGAAACAATGGTAATAGAGAACTGACGATAGATAGCACCAGTAGAACCGCCAAAGAAGGCCATCGGTACGAATACCGCCGACAGTACCATCGCGATACCGA  >  NC_000913/482121‑482300

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`