BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,008,990	C→T	R109C (CGT→TGT)	yigM →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,008,990	0	C	T	100.0%	973.3 / NA	256	R109C (CGT→TGT)	yigM	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (131/125); total (131/125)

Only 100 of 264 total aligned reads displayed.

TATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCCGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGG  >  NC_000913/4008900‑4009079

tATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGt                                                                                         >  2:2286974/1‑93 (MQ=255)

 ttctcTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTc                                                                                        <  1:4453442/92‑1 (MQ=255)

 aTCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTc                                                                                        <  2:5301033/93‑1 (MQ=255)

 aTCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTc                                                                                        <  1:548013/93‑1 (MQ=255)

 aTCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTc                                                                                        <  1:2900970/93‑1 (MQ=255)

 aTCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTc                                                                                        <  1:3727949/93‑1 (MQ=255)

  tctcTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCt                                                                                       <  1:3977365/93‑1 (MQ=255)

  tctcTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCt                                                                                       >  2:2099029/1‑93 (MQ=255)

    tctACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgc                                                                                     >  2:1036716/1‑93 (MQ=255)

    tctACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgc                                                                                     >  1:700924/1‑93 (MQ=255)

    tctACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgc                                                                                     <  2:4072681/93‑1 (MQ=255)

     ctACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgcg                                                                                    >  2:4729243/1‑93 (MQ=255)

      tACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgcgc                                                                                   >  2:1169935/1‑93 (MQ=255)

      tACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgcgc                                                                                   <  1:346640/93‑1 (MQ=255)

      tACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTgcgc                                                                                   >  2:2642321/1‑93 (MQ=255)

       aCCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTCAGCGCTGTCTgcgcg                                                                                  >  1:435449/1‑92 (MQ=255)

        ccTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTg                                                                                 >  1:1251333/1‑93 (MQ=255)

         cTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTgg                                                                                >  1:4859171/1‑93 (MQ=255)

         cTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTgg                                                                                >  2:3369712/1‑93 (MQ=255)

         cTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTgg                                                                                <  1:2144394/93‑1 (MQ=255)

         cTGACGGTGTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTgg                                                                                <  2:190246/93‑1 (MQ=255)

           gACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTgggg                                                                              >  2:4619138/1‑93 (MQ=255)

            aCGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGc                                                                             <  1:2300709/93‑1 (MQ=255)

            aCGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGc                                                                             >  1:3617843/1‑93 (MQ=255)

            aCGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGc                                                                             >  1:957734/1‑93 (MQ=255)

             cGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCt                                                                            <  2:6006764/93‑1 (MQ=255)

              ggTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTa                                                                           <  2:3936265/93‑1 (MQ=255)

              ggTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTa                                                                           >  2:132026/1‑93 (MQ=255)

               gTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTAt                                                                          <  2:2809598/93‑1 (MQ=255)

                    cGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCtt                                                                     <  1:3415977/93‑1 (MQ=255)

                     gAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCttt                                                                    <  2:1050502/93‑1 (MQ=255)

                     gAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCttt                                                                    >  1:4761904/1‑93 (MQ=255)

                     gAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCttt                                                                    >  2:1857405/1‑93 (MQ=255)

                      aGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTa                                                                   <  1:5730441/93‑1 (MQ=255)

                      aGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTa                                                                   <  2:3827931/93‑1 (MQ=255)

                       gctgctgctGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAg                                                                  >  2:3877302/1‑93 (MQ=255)

                        ctgctgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAgc                                                                 <  1:1724528/93‑1 (MQ=255)

                        ctgctgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAgc                                                                 >  2:2463359/1‑93 (MQ=255)

                          gctgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAgcgc                                                               >  2:4418933/1‑93 (MQ=255)

                            tgctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCt                                                             <  1:1478703/93‑1 (MQ=255)

                             gctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCtt                                                            <  2:3565188/93‑1 (MQ=255)

                              ctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTg                                                           >  1:3693880/1‑93 (MQ=255)

                              ctgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTg                                                           <  1:1494822/93‑1 (MQ=255)

                               tgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGc                                                          >  2:1949346/1‑93 (MQ=255)

                               tgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGc                                                          >  2:3472234/1‑93 (MQ=255)

                               tgTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGc                                                          <  2:5991239/93‑1 (MQ=255)

                                gTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCt                                                         <  1:2602397/93‑1 (MQ=255)

                                    aCCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCg                                                     >  1:5158962/1‑93 (MQ=255)

                                     ccGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCgg                                                    <  2:5499291/93‑1 (MQ=255)

                                      cGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGt                                                   >  1:600283/1‑93 (MQ=255)

                                        tGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGa                                                 <  2:5213705/93‑1 (MQ=255)

                                         gCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGAt                                                >  2:1513972/1‑93 (MQ=255)

                                            gACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTgg                                             <  1:4647365/93‑1 (MQ=255)

                                            gACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTgg                                             <  1:386326/93‑1 (MQ=255)

                                             aCGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGt                                            <  2:2574224/93‑1 (MQ=255)

                                             aCGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGt                                            <  2:3037307/93‑1 (MQ=255)

                                                ccgcTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGcc                                         >  1:1008713/1‑93 (MQ=255)

                                                ccgcTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGcc                                         >  1:3171112/1‑93 (MQ=255)

                                                  gcTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCgg                                       <  2:5705811/93‑1 (MQ=255)

                                                  gcTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCgg                                       >  2:1838185/1‑93 (MQ=255)

                                                  gcTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCgg                                       >  1:502780/1‑93 (MQ=255)

                                                   ctctACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCggg                                      <  1:1913945/93‑1 (MQ=255)

                                                     ctACATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGat                                    >  1:1352140/1‑93 (MQ=255)

                                                       aCATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGatta                                  <  2:320526/93‑1 (MQ=255)

                                                        cATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGattat                                 >  1:3102701/1‑93 (MQ=255)

                                                        cATCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGattat                                 >  1:2211547/1‑93 (MQ=255)

                                                         aTCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGattatt                                <  2:5109282/93‑1 (MQ=255)

                                                          tCACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTc                               >  1:5270042/1‑93 (MQ=255)

                                                           cACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCg                              <  2:5636235/93‑1 (MQ=255)

                                                           cACGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCg                              >  1:4187729/1‑93 (MQ=255)

                                                            aCGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGc                             >  2:4713840/1‑93 (MQ=255)

                                                             cGCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCt                            >  2:4310673/1‑93 (MQ=255)

                                                              gCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTa                           >  2:4986339/1‑93 (MQ=255)

                                                              gCTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTa                           >  1:581039/1‑93 (MQ=255)

                                                               cTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGGTTATTCGCTAt                          >  1:5389192/1‑93 (MQ=255)

                                                               cTGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGGGATTGGTGCCGGGATTATTCGCTAt                          >  1:2979125/1‑93 (MQ=255)

                                                                tGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATg                         >  2:6073557/1‑93 (MQ=255)

                                                                tGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATg                         >  1:1612532/1‑93 (MQ=255)

                                                                tGATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATg                         >  2:2223133/1‑93 (MQ=255)

                                                                 gATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGa                        <  1:2908004/93‑1 (MQ=255)

                                                                 gATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGa                        >  1:2100270/1‑93 (MQ=255)

                                                                 gATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGa                        <  2:4147438/93‑1 (MQ=255)

                                                                 gATTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGa                        <  1:2498533/93‑1 (MQ=255)

                                                                  aTTTATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGAt                       >  1:1319025/1‑93 (MQ=255)

                                                                    ttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCa                     <  1:4590736/93‑1 (MQ=255)

                                                                    ttATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCa                     <  1:4902633/93‑1 (MQ=255)

                                                                     tATGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAg                    <  1:4556158/93‑1 (MQ=255)

                                                                      aTGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAgg                   <  1:327636/93‑1 (MQ=255)

                                                                       tGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGt                  >  2:1671163/1‑93 (MQ=255)

                                                                       tGACATCATGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGt                  <  2:2870704/93‑1 (MQ=255)

                                                                          catcatGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCAc               <  2:694930/93‑1 (MQ=255)

                                                                           atcatGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCAcc              >  2:3144259/1‑93 (MQ=255)

                                                                            tcatGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCg             >  2:908707/1‑93 (MQ=255)

                                                                             catGAGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGa            >  1:590405/1‑93 (MQ=255)

                                                                                 aGTAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCAt        <  2:4809864/93‑1 (MQ=255)

                                                                                   tAAGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCAttt      >  2:811537/1‑93 (MQ=255)

                                                                                    aaGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTc     >  2:361218/1‑93 (MQ=255)

                                                                                    aaGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTc     >  2:641182/1‑93 (MQ=255)

                                                                                     aGCGCTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCt    <  1:1091334/93‑1 (MQ=255)

                                                                                       cgcTGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTgg  >  1:6251224/1‑93 (MQ=255)

TATCTCTACCTGACGGTTTCCGAGCTGCTGCTGTTCACCGTGCTGACGCCGCTCTACATCACGCTGATTTATGACATCATGAGTAAGCGCCGTCTGCGCTGGGGCTATGCCTTTAGCGCCTTGCTGGCGGTGATTGGTGCCGGGATTATTCGCTATGATCAGGTCACCGACCATTTCTGG  >  NC_000913/4008900‑4009079

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`