BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,012,917	G→A	T268I (ACC→ATC)	ysgA ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,012,917	0	G	A	100.0%	766.9 / NA	208	T268I (ACC→ATC)	ysgA	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (84/124); total (84/124)

Only 100 of 218 total aligned reads displayed.

AAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTC  >  NC_000913/4012827‑4013006

aaaaCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGgatg                                                                                         <  2:5757353/93‑1 (MQ=255)

  aaCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGgatggt                                                                                       >  1:5430546/1‑93 (MQ=255)

  aaCGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGgatggt                                                                                       <  2:3077692/93‑1 (MQ=255)

    cgcgcgGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTaa                                                                                     <  2:2019351/93‑1 (MQ=255)

       gcgGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATac                                                                                  >  2:1067139/1‑93 (MQ=255)

       gcgGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATac                                                                                  >  2:145478/1‑93 (MQ=255)

        cgGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTTCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATacc                                                                                 <  2:2730879/93‑1 (MQ=255)

          gCTGGCCAGAATCCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATaccac                                                                               <  2:6057979/93‑1 (MQ=255)

          gCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATaccac                                                                               >  2:334368/1‑93 (MQ=255)

          gCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATaccac                                                                               <  2:2669649/93‑1 (MQ=255)

           gtGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCGGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATaccacc                                                                              <  2:3702930/92‑1 (MQ=255)

           cTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATaccacc                                                                              <  1:1584295/93‑1 (MQ=255)

           cTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATaccacc                                                                              <  2:5671683/93‑1 (MQ=255)

           cTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATaccacc                                                                              <  1:2893447/93‑1 (MQ=255)

            tGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCAccc                                                                             >  2:500303/1‑93 (MQ=255)

            tGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCAccc                                                                             >  1:5549908/1‑93 (MQ=255)

             ggCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCg                                                                            <  2:4416188/93‑1 (MQ=255)

                cAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTc                                                                         >  2:846613/1‑93 (MQ=255)

                 aGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCt                                                                        >  1:5330394/1‑93 (MQ=255)

                  gAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCtt                                                                       >  2:5982292/1‑93 (MQ=255)

                     aCCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTtc                                                                    <  2:4862070/93‑1 (MQ=255)

                      cccGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTtct                                                                   <  2:805695/93‑1 (MQ=255)

                       ccGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTtctc                                                                  <  2:1237589/93‑1 (MQ=255)

                        cgcgcgGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCa                                                                 <  2:6063553/93‑1 (MQ=255)

                        cgcgcgGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCa                                                                 <  1:1146716/93‑1 (MQ=255)

                        cgcgcgGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCa                                                                 >  1:2109456/1‑93 (MQ=255)

                         gcgcgGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCAt                                                                >  1:2650981/1‑93 (MQ=255)

                         gcgcgGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCAt                                                                <  2:1963584/93‑1 (MQ=255)

                            cgtcACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTAc                                                             <  2:4257317/90‑1 (MQ=255)

                             ggCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACa                                                            >  1:911385/1‑93 (MQ=255)

                              gCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAg                                                           >  1:4916798/1‑93 (MQ=255)

                              gCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAg                                                           <  1:3825668/93‑1 (MQ=255)

                               cACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGc                                                          >  1:849669/1‑93 (MQ=255)

                               cACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGc                                                          >  1:2278025/1‑93 (MQ=255)

                                 cTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGa                                                        <  1:51738/93‑1 (MQ=255)

                                 cTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGa                                                        <  2:1675558/93‑1 (MQ=255)

                                  tGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGAc                                                       >  1:3119599/1‑93 (MQ=255)

                                  tGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGAc                                                       >  1:869051/1‑93 (MQ=255)

                                  tGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGAc                                                       >  1:1472124/1‑93 (MQ=255)

                                     cGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGActtc                                                    >  1:2699179/1‑93 (MQ=255)

                                      gAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGActtct                                                   >  1:3877513/1‑93 (MQ=255)

                                       aaCATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGActtctt                                                  <  1:6269873/93‑1 (MQ=255)

                                        aCATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACttcttc                                                 <  1:4858867/93‑1 (MQ=255)

                                         cATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTcc                                                >  2:2132311/1‑93 (MQ=255)

                                          aTGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTccc                                               <  1:5849500/93‑1 (MQ=255)

                                           tGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCcca                                              >  1:942344/1‑93 (MQ=255)

                                             gTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCccacc                                            <  2:4831171/93‑1 (MQ=255)

                                              tGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCccacca                                           >  1:1766832/1‑93 (MQ=255)

                                              tGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCccacca                                           <  2:692232/93‑1 (MQ=255)

                                               gCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCAt                                          >  1:5479771/1‑93 (MQ=255)

                                               gCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCAt                                          <  2:1856566/93‑1 (MQ=255)

                                                 aGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATAc                                        <  2:4084194/93‑1 (MQ=255)

                                                 aGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATAc                                        >  2:2428278/1‑93 (MQ=255)

                                                  ggcggcGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACt                                       <  2:4591392/93‑1 (MQ=255)

                                                  ggcggcGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACt                                       <  2:4725694/93‑1 (MQ=255)

                                                       cgcAGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTa                                  <  1:3388772/93‑1 (MQ=255)

                                                          aGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAAc                               <  2:3809329/93‑1 (MQ=255)

                                                          aGAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAAc                               <  1:1680379/93‑1 (MQ=255)

                                                           gAACTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAAcc                              <  2:5477733/93‑1 (MQ=255)

                                                            aaCTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCa                             >  2:1191407/1‑93 (MQ=255)

                                                              cTTGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCAtt                           >  2:5785930/1‑93 (MQ=255)

                                                               ttGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTc                          <  1:6004104/93‑1 (MQ=255)

                                                                tGCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTcc                         <  2:4346742/93‑1 (MQ=255)

                                                                 gCGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCa                        <  2:3179467/93‑1 (MQ=255)

                                                                  cGTCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAg                       <  2:3859530/93‑1 (MQ=255)

                                                                    tCGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCa                     <  1:3502109/93‑1 (MQ=255)

                                                                     cGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCAt                    <  1:3626996/93‑1 (MQ=255)

                                                                     cGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCAt                    <  1:4038673/93‑1 (MQ=255)

                                                                     cGGGGGTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCAt                    >  1:4218349/1‑93 (MQ=255)

                                                                      gggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATa                   <  2:2325093/93‑1 (MQ=255)

                                                                      gggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATa                   <  2:2915277/93‑1 (MQ=255)

                                                                      gggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATa                   <  1:3646287/93‑1 (MQ=255)

                                                                      gggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATa                   <  2:1699161/93‑1 (MQ=255)

                                                                       ggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATAc                  <  1:1902096/93‑1 (MQ=255)

                                                                       ggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATAc                  <  2:3540698/93‑1 (MQ=255)

                                                                       ggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATAc                  <  1:331488/93‑1 (MQ=255)

                                                                       ggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATAc                  >  1:2370128/1‑93 (MQ=255)

                                                                       ggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATAc                  >  1:5506774/1‑93 (MQ=255)

                                                                       ggggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACAATTCCAGCATAc                  >  1:1238709/1‑93 (MQ=255)

                                                                         ggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGc                >  2:2827430/1‑93 (MQ=255)

                                                                         ggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGc                <  2:1996976/93‑1 (MQ=255)

                                                                         ggTAAAATCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGc                <  2:2231344/93‑1 (MQ=255)

                                                                            aaaaTCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgc             >  1:137198/1‑93 (MQ=255)

                                                                            aaaaTCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgc             <  2:5641084/93‑1 (MQ=255)

                                                                             aaaTCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgcc            <  1:2535909/93‑1 (MQ=255)

                                                                             aaaTCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgcc            <  1:2569532/93‑1 (MQ=255)

                                                                              aaTCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgcca           <  1:1024392/93‑1 (MQ=255)

                                                                               aTCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgccag          >  1:5894943/1‑93 (MQ=255)

                                                                               aTCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgccag          >  1:435398/1‑93 (MQ=255)

                                                                                tCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgccagc         >  2:2421919/1‑93 (MQ=255)

                                                                                tCCAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCAAGCATACGCTgccagc         >  2:1597173/1‑93 (MQ=255)

                                                                                 ccAAACCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTgccagcc        >  2:1267777/1‑93 (MQ=255)

                                                                                   aaaCCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCAt      <  1:5735052/93‑1 (MQ=255)

                                                                                    aaCCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCAtc     <  1:1174127/93‑1 (MQ=255)

                                                                                    aaCCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTCCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCAtc     <  1:1284633/93‑1 (MQ=255)

                                                                                     aCCGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCAtct    <  1:2391332/93‑1 (MQ=255)

                                                                                      ccGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCAtctt   >  2:5079418/1‑93 (MQ=255)

                                                                                      ccGGATGGTAACACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCAtctt   <  1:6010331/93‑1 (MQ=255)

                                                                                       cGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCAtcttc  <  2:4393691/93‑1 (MQ=255)

                                                                                       cGGATGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCAtcttc  <  1:3568686/93‑1 (MQ=255)

AAAACGCGCGGCTGGCCAGAAACCCGCGCGGCACTGGCGAACATGGTGCAGGCGGCGCAGAACTTGCGTCGGGGGTAAAATCCAAACCGGGTGGTAATACCACCCGGTCTTTTCTCATTACAGCGACTTCTTCCCACCATACTGCTTAAACCATTCCAGCATACGCTGCCAGCCATCTTC  >  NC_000913/4012827‑4013006

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 40 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`