BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,019,057	A→G	V415V (GTA→GTG)	yigR →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,019,057	0	A	G	100.0%	838.2 / NA	265	V415V (GTA→GTG)	yigR	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (134/131); total (134/131)

Only 100 of 274 total aligned reads displayed.

AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGC  >  NC_000913/4018968‑4019146

aaTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGa                                                                                        >  2:893245/1‑93 (MQ=255)

 aTCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGAc                                                                                       >  1:4075909/1‑93 (MQ=255)

  tCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACg                                                                                      <  2:4313557/93‑1 (MQ=255)

    tGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGcc                                                                                    >  2:1459498/1‑93 (MQ=255)

    cgTTTAATACGGCGCGTCGTTTCAATATGGAAGTGCGGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGcc                                                                                    <  1:2770759/92‑1 (MQ=255)

     gTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGcc                                                                                    >  2:3802247/1‑92 (MQ=255)

     gTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCa                                                                                   <  2:2877245/93‑1 (MQ=255)

      tttAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAg                                                                                  >  1:5797058/1‑93 (MQ=255)

         aaTACGGCGCGTCGCTTCAATATGGAAGTGCAGCCACAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCtt                                                                               <  1:3976053/93‑1 (MQ=255)

          aTACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCttt                                                                              >  1:481072/1‑93 (MQ=255)

           tACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTa                                                                             <  1:1433147/93‑1 (MQ=255)

           tACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTa                                                                             >  1:2296807/1‑93 (MQ=255)

            aCGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAACCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAt                                                                            <  2:2468410/93‑1 (MQ=255)

            aCGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTAt                                                                            >  1:568429/1‑93 (MQ=255)

             cGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATc                                                                           >  1:3566866/1‑93 (MQ=255)

              ggCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATcc                                                                          <  1:5370329/93‑1 (MQ=255)

               gcgcGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCg                                                                         >  2:930565/1‑93 (MQ=255)

                cgcgTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGc                                                                        >  2:5469613/1‑93 (MQ=255)

                   gTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAAc                                                                     <  1:272653/93‑1 (MQ=255)

                       cTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGa                                                                 <  2:5592362/93‑1 (MQ=255)

                         tCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGAtt                                                               >  1:1043802/1‑93 (MQ=255)

                           aaTATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTa                                                             <  1:3175544/93‑1 (MQ=255)

                           aaTATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTa                                                             >  1:5165514/1‑93 (MQ=255)

                            atatGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTAt                                                            >  1:5077285/1‑93 (MQ=255)

                             tatGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATg                                                           >  2:4802636/1‑93 (MQ=255)

                              atGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATgg                                                          >  1:663797/1‑93 (MQ=255)

                               tGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGa                                                         >  1:4625012/1‑93 (MQ=255)

                               tGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGGGGGACGCCAGCTTTATCCGCAACTCGATTTATGGa                                                         >  1:714361/1‑93 (MQ=255)

                                ggAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaa                                                        >  1:5236076/1‑93 (MQ=255)

                                 gAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGaaa                                                       <  1:768370/93‑1 (MQ=255)

                                   aGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAc                                                     <  1:1398143/93‑1 (MQ=255)

                                    gTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACg                                                    <  1:5054631/93‑1 (MQ=255)

                                     tGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACgg                                                   <  1:3760619/93‑1 (MQ=255)

                                      gCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGc                                                  <  1:1738957/93‑1 (MQ=255)

                                         gCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGaa                                               <  1:1959601/93‑1 (MQ=255)

                                           cGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGc                                             >  2:3445962/1‑93 (MQ=255)

                                            gCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGcc                                            <  2:5823839/93‑1 (MQ=255)

                                             cAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCt                                           <  1:246322/93‑1 (MQ=255)

                                             cAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCt                                           >  1:6253586/1‑93 (MQ=255)

                                             cAACT‑GTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCtt                                          >  2:4236729/1‑93 (MQ=255)

                                              aaCTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCtt                                          <  2:707159/93‑1 (MQ=255)

                                              aaCTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCtt                                          >  2:4762406/1‑93 (MQ=255)

                                              aaCTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCtt                                          <  1:4415300/93‑1 (MQ=255)

                                              aaCTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCtt                                          <  2:618440/93‑1 (MQ=255)

                                               aCTGGTGTTACTCCAGAAAACCCTGCTGTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCttt                                         <  1:3107085/93‑1 (MQ=255)

                                                cTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTc                                        <  2:400557/93‑1 (MQ=255)

                                                 tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       <  1:1731304/93‑1 (MQ=255)

                                                 tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       <  2:5697222/93‑1 (MQ=255)

                                                 tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       >  1:4142561/1‑93 (MQ=255)

                                                 tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       <  2:1267027/93‑1 (MQ=255)

                                                 tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       <  2:661829/93‑1 (MQ=255)

                                                 tGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTcc                                       >  1:5591959/1‑93 (MQ=255)

                                                  ggTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCt                                      >  2:5954027/1‑93 (MQ=255)

                                                    tgtTGCTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAACCGGCGAAGCCTTTCCTgg                                    <  1:4370977/93‑1 (MQ=255)

                                                    tgtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTgg                                    <  1:5500335/93‑1 (MQ=255)

                                                     gtTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGa                                   >  2:5157270/1‑93 (MQ=255)

                                                      ttACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAg                                  >  2:4693889/1‑93 (MQ=255)

                                                       tACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGt                                 >  2:305973/1‑93 (MQ=255)

                                                       tACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGt                                 <  2:1755197/93‑1 (MQ=255)

                                                       tACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGt                                 <  1:4043465/93‑1 (MQ=255)

                                                        aCTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTc                                <  1:4434534/93‑1 (MQ=255)

                                                         cTCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCg                               >  2:4367060/1‑93 (MQ=255)

                                                          tCCAGAAACCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGt                              <  1:915326/93‑1 (MQ=255)

                                                          tCCAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGt                              <  1:3293937/93‑1 (MQ=255)

                                                            cAGAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTgg                            >  1:3579234/1‑93 (MQ=255)

                                                              gAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGAt                          <  2:2574853/93‑1 (MQ=255)

                                                              gAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGAt                          >  2:2449734/1‑93 (MQ=255)

                                                              gAAAACCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGAt                          <  2:3770992/93‑1 (MQ=255)

                                                                aaaCCCTGCTCTACGTCGAAGGGGAGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTa                        >  2:2964402/1‑93 (MQ=255)

                                                                 aaCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaa                       <  1:3179031/93‑1 (MQ=255)

                                                                  aCCCTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTaaa                      >  2:4578251/1‑93 (MQ=255)

                                                                   cccTTCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAg                     <  1:2968480/93‑1 (MQ=255)

                                                                   cccTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAg                     >  2:4928873/1‑93 (MQ=255)

                                                                   cccTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAg                     <  1:5196200/93‑1 (MQ=255)

                                                                     cTGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGAt                   >  2:1829237/1‑93 (MQ=255)

                                                                      tGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATc                  >  2:2686773/1‑93 (MQ=255)

                                                                      tGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATc                  <  2:5335515/93‑1 (MQ=255)

                                                                      tGCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAAAGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGAta                  >  2:1086975/1‑92 (MQ=255)

                                                                       tctctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa                 <  1:5912895/92‑1 (MQ=255)

                                                                       gCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa                 <  2:325689/93‑1 (MQ=255)

                                                                       gCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa                 >  2:2857246/1‑93 (MQ=255)

                                                                       gCTCTACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCa                 <  2:2041066/93‑1 (MQ=255)

                                                                        ctctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAg                <  1:6085073/93‑1 (MQ=255)

                                                                        cgctACGTCGAAGGGGGGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAg                <  2:1375310/91‑1 (MQ=255)

                                                                          ctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGATAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGt              <  1:2018699/93‑1 (MQ=255)

                                                                          ctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGt              <  2:4426521/93‑1 (MQ=255)

                                                                          ctACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGt              >  1:4502553/1‑93 (MQ=255)

                                                                           tACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTc             >  2:238247/1‑93 (MQ=255)

                                                                           tACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTc             <  2:2205963/93‑1 (MQ=255)

                                                                           tACGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTc             <  1:985807/93‑1 (MQ=255)

                                                                            aCGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCg            >  2:5027830/1‑93 (MQ=255)

                                                                            aCGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCg            >  2:5933165/1‑93 (MQ=255)

                                                                            aCGTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCg            >  2:6258475/1‑93 (MQ=255)

                                                                              gTCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGt          >  1:1014871/1‑93 (MQ=255)

                                                                               tCGAAGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTa         <  2:2017892/93‑1 (MQ=255)

                                                                                  aaGGGGTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTc      <  1:114134/93‑1 (MQ=255)

                                                                                    ggggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt    <  2:3653152/93‑1 (MQ=255)

                                                                                    ggggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt    >  2:3218432/1‑93 (MQ=255)

                                                                                    ggggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt    <  1:5981178/93‑1 (MQ=255)

                                                                                    ggggTGGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCt    <  1:3502032/93‑1 (MQ=255)

AATCTGTTTAATACGGCGCGTCGCTTCAATATGGAAGTGCAGCCGCAACTGGTGTTACTCCAGAAAACCCTGCTCTACGTCGAAGGGGTAGGACGCCAGCTTTATCCGCAACTCGATTTATGGAAAACGGCGAAGCCTTTCCTGGAGTCGTGGATTAAAGATCAGGTCGGTATTCCTGC  >  NC_000913/4018968‑4019146

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`