BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,035,428	A→G	noncoding (330/2905 nt)	rrlA →	23S ribosomal RNA

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,035,428	0	A	G	100.0%	451.2 / NA	187	noncoding (330/2905 nt)	rrlA	23S ribosomal RNA
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (83/104); total (83/104)

Only 100 of 191 total aligned reads displayed.

CAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG  >  NC_000913/4035338‑4035506

cAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCa                                                                              >  2:2944954/1‑93 (MQ=18)

cAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCa                                                                              <  2:1977064/93‑1 (MQ=21)

 aGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAg                                                                             <  1:2762525/93‑1 (MQ=18)

    aGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGccc                                                                          <  2:1920038/93‑1 (MQ=18)

           agcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTacac                                                                   >  1:2166934/1‑93 (MQ=18)

           agcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTacac                                                                   <  1:3158600/93‑1 (MQ=18)

            gcgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTAcaca                                                                  >  1:253359/1‑93 (MQ=18)

             cgaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaa                                                                 <  2:3477318/93‑1 (MQ=21)

              gaACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaa                                                                <  2:433882/93‑1 (MQ=21)

               aaCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaaa                                                               >  1:4320962/1‑93 (MQ=18)

               aaCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaaa                                                               >  2:1830992/1‑93 (MQ=18)

                aCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaaaa                                                              >  1:4397499/1‑93 (MQ=18)

                aCGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACaaaaa                                                              <  2:393148/93‑1 (MQ=21)

                 cGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGGTACAGGGTGGCAGCCCCGTACACAAAAAt                                                             >  1:3959581/1‑93 (MQ=16)

                    ggAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGca                                                          <  1:3746777/93‑1 (MQ=18)

                    ggAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGca                                                          >  1:4076472/1‑93 (MQ=18)

                     gAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGcac                                                         <  2:1615942/93‑1 (MQ=18)

                     gAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAAGGcac                                                         <  1:3516178/93‑1 (MQ=16)

                        cagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATg                                                      <  2:3355627/93‑1 (MQ=21)

                        cagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATg                                                      <  1:4372634/93‑1 (MQ=18)

                        cagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATg                                                      >  2:1180758/1‑93 (MQ=18)

                        cagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATg                                                      <  1:72854/93‑1 (MQ=21)

                        cagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCAATACAGGGTGGCAGCCCCGTACACAAAAATGCACATg                                                      <  1:147185/93‑1 (MQ=255)

                        cagcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTAGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATg                                                      <  2:6212181/93‑1 (MQ=255)

                         agcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGc                                                     <  2:1217325/93‑1 (MQ=21)

                         agcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGc                                                     <  2:5817174/93‑1 (MQ=18)

                         agcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGc                                                     >  1:4016094/1‑93 (MQ=21)

                         agcCCAGAGCCTGAATCAGCGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGGGGCAGCCCCGTACACAAAAATGCACATgt                                                     >  1:1529602/1‑92 (MQ=11)

                          gcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCt                                                    <  2:6041066/93‑1 (MQ=18)

                          gcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCt                                                    >  1:3484061/1‑93 (MQ=18)

                          gcCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGGGGCAGCCCCGCACACAAAAATGCACATGCt                                                    >  2:75448/1‑93 (MQ=255)

                           cccAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCtg                                                   >  1:5777237/1‑93 (MQ=21)

                           cccAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCtg                                                   <  1:1075369/93‑1 (MQ=21)

                           cccAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACAAAAAAATGCACATGCtg                                                   >  2:5021920/1‑93 (MQ=16)

                            ccAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCtgt                                                  >  2:2517952/1‑93 (MQ=18)

                            ccAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCtgt                                                  <  2:2551029/93‑1 (MQ=21)

                             cAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCtgtg                                                 >  2:5764409/1‑93 (MQ=18)

                              agagCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGa                                                >  2:912218/1‑93 (MQ=18)

                              agagCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGa                                                <  2:941049/93‑1 (MQ=21)

                              agagCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGa                                                <  1:2600352/93‑1 (MQ=18)

                              agagCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGAACATGCTGTGa                                                >  2:3057020/1‑93 (MQ=16)

                               gagCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAg                                               <  2:4175832/93‑1 (MQ=21)

                                agCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGc                                              <  1:3651487/93‑1 (MQ=21)

                                agCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGc                                              <  2:2126244/93‑1 (MQ=18)

                                  ccTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTc                                            <  1:4638671/93‑1 (MQ=18)

                                  ccTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTc                                            <  2:1564971/93‑1 (MQ=18)

                                   cTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCg                                           >  1:2294054/1‑93 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          >  1:2490574/1‑93 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          <  1:6037003/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          >  1:6053201/1‑93 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          <  2:2177328/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          <  1:1698415/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGa                                          <  2:225043/93‑1 (MQ=18)

                                    tGAATCAGTGTGTGTGTTAGTGCACGCGTCTGGAAATGCGTGGGATACATGGGGTCAATCTCGTGCTCATACATGAACATGCTGTGCTCTCGa                                          >  2:372231/1‑93 (MQ=2)

                                     gAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAt                                         <  1:3270291/93‑1 (MQ=18)

                                     gAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGAt                                         <  2:376955/93‑1 (MQ=18)

                                       aTCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGa                                       <  1:5111512/93‑1 (MQ=18)

                                       aTCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGAGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGa                                       >  2:1448192/1‑93 (MQ=16)

                                         cAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGt                                     <  1:6294061/93‑1 (MQ=18)

                                          aGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGGGCTCGATGAGTa                                    <  2:4559955/93‑1 (MQ=255)

                                          aGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTa                                    <  1:2958599/93‑1 (MQ=18)

                                          aGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTa                                    >  1:5274038/1‑93 (MQ=18)

                                          aGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTa                                    <  1:4311722/93‑1 (MQ=18)

                                           gtgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAg                                   >  1:5579460/1‑93 (MQ=18)

                                            tgtgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGGGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGGGGAgg                                  >  1:4938256/1‑93 (MQ=11)

                                              tgtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGc                                <  1:1018676/93‑1 (MQ=18)

                                               gtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAACAATGCACATGCTGTGAGCTCGATGAGTAGGGCg                               >  1:941446/1‑93 (MQ=16)

                                               gtgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCg                               >  2:550944/1‑93 (MQ=18)

                                                tgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCgg                              >  2:2389158/1‑93 (MQ=18)

                                                tgtgtTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCgg                              >  2:3337804/1‑93 (MQ=18)

                                                      aGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACg                        <  1:1792158/93‑1 (MQ=18)

                                                       gTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                       >  1:413143/1‑93 (MQ=18)

                                                       gTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                       >  1:1152958/1‑93 (MQ=18)

                                                       gTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                       <  1:2488350/93‑1 (MQ=18)

                                                       gTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                       <  1:6224055/93‑1 (MQ=18)

                                                       gTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGt                       <  2:5297363/93‑1 (MQ=18)

                                                       gTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGACCCGTACACAAAAATGCACATGCTGTGAGCTCGCTGAGTAGGGCGGGACACGt                       >  1:3279741/1‑93 (MQ=255)

                                                        tGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg                      <  1:5752105/93‑1 (MQ=18)

                                                        tGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg                      <  1:4859791/93‑1 (MQ=18)

                                                        tGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTg                      >  2:3860451/1‑93 (MQ=21)

                                                         ggAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTgg                     <  1:3813303/93‑1 (MQ=18)

                                                          gAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGt                    <  1:478930/93‑1 (MQ=18)

                                                          gAAGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGt                    >  2:825453/1‑93 (MQ=18)

                                                           aaGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTa                   >  2:4407643/1‑93 (MQ=21)

                                                           aaGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTa                   <  2:1327208/93‑1 (MQ=18)

                                                            aGCGTCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTAt                  >  2:1634199/1‑93 (MQ=21)

                                                                tCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTg              >  2:4470206/1‑93 (MQ=18)

                                                                tCTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTg              >  1:2639195/1‑93 (MQ=18)

                                                                 cTGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGt             >  2:710640/1‑93 (MQ=18)

                                                                  tGGAAAGGCGTGCGATACAGGTTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCTATGAGTAGGGCGGGACACGTGGTATCCTGTc            <  2:1910224/93‑1 (MQ=255)

                                                                  tGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc            <  2:4731291/93‑1 (MQ=18)

                                                                  tGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc            >  2:4823484/1‑93 (MQ=18)

                                                                  tGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc            >  2:4101983/1‑93 (MQ=18)

                                                                  tGGAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTc            >  2:4006200/1‑93 (MQ=18)

                                                                    gAAAGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTg          >  2:4641806/1‑93 (MQ=21)

                                                                       aGGCGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAat       <  1:1408090/93‑1 (MQ=18)

                                                                        gtcGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAata      <  1:5481905/91‑1 (MQ=16)

                                                                          cGTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATg    <  2:5312048/93‑1 (MQ=18)

                                                                           gTGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATgg   >  1:3202947/1‑93 (MQ=17)

                                                                            tGCGATACAGGGTGGCAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATggg  <  1:2449775/93‑1 (MQ=14)

CAGTAGCGGCGAGCGAACGGGGAGCAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGTGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACATGCTGTGAGCTCGATGAGTAGGGCGGGACACGTGGTATCCTGTCTGAATATGGG  >  NC_000913/4035338‑4035506

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`