BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,074,827	A→G	Q78R (CAG→CGG)	yihZ →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,074,827	0	A	G	100.0%	721.7 / NA	226	Q78R (CAG→CGG)	yihZ	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (100/126); total (100/126)

Only 100 of 240 total aligned reads displayed.

GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACT  >  NC_000913/4074737‑4074916

 tgtgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGtt                                                                                        <  2:4641464/93‑1 (MQ=255)

  gtgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGttt                                                                                       <  1:4138943/93‑1 (MQ=255)

   tgCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTa                                                                                      >  1:5388394/1‑93 (MQ=255)

     cTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAcc                                                                                    <  2:494736/93‑1 (MQ=255)

     cTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAcc                                                                                    >  2:3104592/1‑93 (MQ=255)

      tCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAccc                                                                                   <  2:1677824/93‑1 (MQ=255)

      gcGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTAccc                                                                                   <  2:3255924/92‑1 (MQ=255)

       cgtcTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTTGTGGTTTCCCGGTTTACCCt                                                                                  <  2:1840937/90‑1 (MQ=255)

       cGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCt                                                                                  <  2:3704297/93‑1 (MQ=255)

       cGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCt                                                                                  <  2:3288119/93‑1 (MQ=255)

       cGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCt                                                                                  <  2:1094312/93‑1 (MQ=255)

        ggCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTc                                                                                 >  2:665344/1‑93 (MQ=255)

          cTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgc                                                                               <  2:5458133/93‑1 (MQ=255)

          cTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgc                                                                               <  1:2787363/93‑1 (MQ=255)

            aCCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGCGTGCTGGTGGTTTCCCGGTTTACCCTcgccc                                                                             >  1:5754221/1‑92 (MQ=255)

             ccGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgccgc                                                                            >  2:148185/1‑93 (MQ=255)

             ccGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgccgc                                                                            <  1:4407968/93‑1 (MQ=255)

             ccGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTcgccgc                                                                            >  1:931535/1‑93 (MQ=255)

              cGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCa                                                                           >  1:2535187/1‑93 (MQ=255)

                cATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGa                                                                         >  2:2206570/1‑93 (MQ=255)

                  tCTTTAGCGTTGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATa                                                                       >  2:1281675/1‑93 (MQ=255)

                  tCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATa                                                                       >  2:4484392/1‑93 (MQ=255)

                   cTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAc                                                                      <  2:4659745/93‑1 (MQ=255)

                    tttAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATAcc                                                                     <  1:82186/93‑1 (MQ=255)

                     ttAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCg                                                                    >  1:4762038/1‑93 (MQ=255)

                       aGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGaa                                                                  <  1:2154197/93‑1 (MQ=255)

                          gATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgg                                                               <  1:643989/93‑1 (MQ=255)

                           aTGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACggg                                                              <  1:2677834/93‑1 (MQ=255)

                           aTGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACggg                                                              >  2:5970302/1‑93 (MQ=255)

                            tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg                                                             <  1:950625/93‑1 (MQ=255)

                            tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg                                                             >  2:2110293/1‑93 (MQ=255)

                            tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg                                                             >  1:2484936/1‑93 (MQ=255)

                            tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg                                                             <  1:1881826/93‑1 (MQ=255)

                            tGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACgggg                                                             >  2:3970769/1‑93 (MQ=255)

                             gCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACggggg                                                            <  1:5825090/93‑1 (MQ=255)

                              ccGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGa                                                           <  1:2322032/93‑1 (MQ=255)

                              ccGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGa                                                           <  2:1884824/93‑1 (MQ=255)

                               cGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTATCCTCGCCGCAGATACCGAACGGGGGAt                                                          >  2:2672229/1‑93 (MQ=255)

                                gAAGGCAAGATGAATCTCACCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATg                                                         >  2:6080359/1‑93 (MQ=255)

                                gAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATg                                                         <  1:3851095/93‑1 (MQ=255)

                                 aaGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATgc                                                        <  1:1807596/93‑1 (MQ=255)

                                 aaGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATgc                                                        <  2:4808458/93‑1 (MQ=255)

                                  aGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGAGgcg                                                       >  1:2880233/1‑93 (MQ=255)

                                   ggCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATgcgc                                                      <  2:2026770/93‑1 (MQ=255)

                                      aaGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCa                                                   >  2:3405197/1‑93 (MQ=255)

                                       aGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCaa                                                  <  2:5255539/93‑1 (MQ=255)

                                        gATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAg                                                 >  1:4262086/1‑93 (MQ=255)

                                          tGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGtt                                               >  1:2264026/1‑93 (MQ=255)

                                          tGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGGGGTTTCCCGGGTTACACTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGtt                                               >  2:2245389/1‑93 (MQ=255)

                                            aaTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTtc                                             <  1:1192018/93‑1 (MQ=255)

                                            aaTCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTtc                                             >  2:3499970/1‑93 (MQ=255)

                                               ctcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTcc                                          <  1:2062607/93‑1 (MQ=255)

                                               ctcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTcc                                          >  2:2932297/1‑93 (MQ=255)

                                                tcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGCTGCGCCCCAGTTTCTCCa                                         >  2:297336/1‑93 (MQ=255)

                                                tcAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCa                                         <  1:4274975/93‑1 (MQ=255)

                                                   aCGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAg                                      >  1:2432735/1‑93 (MQ=255)

                                                    cGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAgg                                     <  1:4702052/93‑1 (MQ=255)

                                                     gTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGt                                    <  1:1334249/93‑1 (MQ=255)

                                                     gTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGt                                    <  2:3568200/93‑1 (MQ=255)

                                                       gCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGc                                  >  2:5781896/1‑93 (MQ=255)

                                                       gCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGc                                  <  1:4186361/93‑1 (MQ=255)

                                                         aaCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCAt                                <  2:3674003/93‑1 (MQ=255)

                                                          aCAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATc                               <  1:6195655/93‑1 (MQ=255)

                                                           cAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCa                              >  1:3557503/1‑93 (MQ=255)

                                                            aGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAc                             <  1:3001789/93‑1 (MQ=255)

                                                            aGGCGGGCGGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAc                             >  2:1021399/1‑93 (MQ=255)

                                                             ggcgggcgGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcc                            <  2:235382/93‑1 (MQ=255)

                                                             ggcgggcgGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcc                            <  1:3247783/93‑1 (MQ=255)

                                                             ggcgggcgGCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCAcc                            <  2:4015683/93‑1 (MQ=255)

                                                              gcgggcggCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGCAGCGCCCAAGTTTCTCCAAAGGTGCCTTACCg                           >  1:685206/1‑93 (MQ=255)

                                                              gcgggcggCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCg                           <  2:2415357/93‑1 (MQ=255)

                                                              gcgggcggCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCg                           <  2:6040911/93‑1 (MQ=255)

                                                              gcgggcggCAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCg                           >  1:1593844/1‑93 (MQ=255)

                                                                gggcggCAGGGTGCTGGTGGTTTCCCGGTGTACCCTCGCCGCAGATACCGAAGGGGGGATGCGACCAAGTTTCTCCAAAGGTGCATCACCGGa                         <  2:1847580/93‑1 (MQ=255)

                                                                 ggcggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGAt                        >  2:4268796/1‑93 (MQ=255)

                                                                 gacagcAGTGTGCTGATGGTTTCCCGGTTTGCCCTCGCCGCAGATACCGAACGGGGGATGCTCCCAAGTTTCTCCAGAGGTGCATCACCGGAt                        <  2:2809391/89‑1 (MQ=255)

                                                                  gcggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATc                       <  2:3857044/93‑1 (MQ=255)

                                                                   cggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATcg                      <  1:1223565/93‑1 (MQ=255)

                                                                    ggcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATcgc                     >  1:1550471/1‑93 (MQ=255)

                                                                     gcAGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATcgcg                    >  1:1725457/1‑93 (MQ=255)

                                                                       aGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCa                  <  2:5758822/93‑1 (MQ=255)

                                                                       aGTGTGCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCa                  <  1:3960111/93‑1 (MQ=255)

                                                                         tgtgCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCaga                <  2:6279804/93‑1 (MQ=255)

                                                                         tgtgCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCaga                <  1:5261185/93‑1 (MQ=255)

                                                                          gtgCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCagag               >  1:4968096/1‑93 (MQ=255)

                                                                          gtgCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCagag               <  1:1021756/93‑1 (MQ=255)

                                                                           tgCTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAgg              >  2:5336036/1‑93 (MQ=255)

                                                                             cTGGTGGTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCg            <  2:2462398/93‑1 (MQ=255)

                                                                              tggtggTTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGt           <  1:3779736/93‑1 (MQ=255)

                                                                              tggtggTTCCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGt           <  2:1354887/93‑1 (MQ=255)

                                                                               ggtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGtt          >  1:4663444/1‑93 (MQ=255)

                                                                                gtggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTta         >  2:508545/1‑93 (MQ=255)

                                                                                 tggtTTCCCGGTTTACCCTCGCCGCAGATGCCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtat        <  1:3460761/93‑1 (MQ=255)

                                                                                 tggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtat        >  1:887356/1‑93 (MQ=255)

                                                                                  ggtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTtata       <  1:5498441/93‑1 (MQ=255)

                                                                                   gtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTatat      <  1:1446548/93‑1 (MQ=255)

                                                                                   gtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTatat      <  1:3104080/93‑1 (MQ=255)

                                                                                   gtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTatat      <  1:3049097/93‑1 (MQ=255)

                                                                                   gtTTCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTatat      <  1:4509802/93‑1 (MQ=255)

                                                                                      tCCCGGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGAc   >  1:5951603/1‑93 (MQ=255)

GTGTGCTCGGCTACCGCATCTTTAGCGATGCCGAAGGCAAGATGAATCTCAACGTGCAACAGGCGGGCGGCAGTGTGCTGGTGGTTTCCCAGTTTACCCTCGCCGCAGATACCGAACGGGGGATGCGCCCAAGTTTCTCCAAAGGTGCATCACCGGATCGCGCAGAGGCGTTATATGACT  >  NC_000913/4074737‑4074916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`