BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,080,532	A→G	R957R (CGT→CGC)	fdoG ←	formate dehydrogenase‑O, major subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,080,532	0	A	G	100.0%	854.6 / NA	263	R957R (CGT→CGC)	fdoG	formate dehydrogenase‑O, major subunit
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (141/122); total (141/122)

Only 100 of 268 total aligned reads displayed.

AAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATACGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGC  >  NC_000913/4080442‑4080621

 aaGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGt                                                                                        >  2:2840081/1‑93 (MQ=255)

 aaGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGt                                                                                        >  2:6023980/1‑93 (MQ=255)

 aaGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGt                                                                                        <  2:5664320/93‑1 (MQ=255)

  aGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGtt                                                                                       <  1:4131859/93‑1 (MQ=255)

   gCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGttt                                                                                      <  1:1512054/93‑1 (MQ=255)

   gCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGttt                                                                                      >  2:4776573/1‑93 (MQ=255)

     cTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTgg                                                                                    >  2:2087702/1‑93 (MQ=255)

     cTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTgg                                                                                    <  1:453985/93‑1 (MQ=255)

      ttttttAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGt                                                                                   >  2:2047266/1‑93 (MQ=255)

      ttttttAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGt                                                                                   <  1:3195120/93‑1 (MQ=255)

         tttAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcac                                                                                >  1:5703755/1‑93 (MQ=255)

         tttAGCTACGCCTTCATAGCCCCAGTGAATCCGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcac                                                                                >  2:4849721/1‑93 (MQ=255)

          ttAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcacc                                                                               <  2:4223275/93‑1 (MQ=255)

           tAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcacca                                                                              >  2:1360331/1‑93 (MQ=255)

           tAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcacca                                                                              >  1:4488390/1‑93 (MQ=255)

            aGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTcaccac                                                                             >  2:4732189/1‑93 (MQ=255)

             gCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCaccacc                                                                            >  2:3064349/1‑93 (MQ=255)

             gCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCaccacc                                                                            >  1:4661692/1‑93 (MQ=255)

              cTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCg                                                                           >  2:708513/1‑93 (MQ=255)

              cTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCg                                                                           >  1:1136845/1‑93 (MQ=255)

               tACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgc                                                                          <  2:6248169/93‑1 (MQ=255)

               tACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgc                                                                          >  2:3840014/1‑93 (MQ=255)

               tACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgc                                                                          >  2:112631/1‑93 (MQ=255)

                aCGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgct                                                                         <  2:1803764/93‑1 (MQ=255)

                aCGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgct                                                                         >  1:612618/1‑93 (MQ=255)

                   ccTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttg                                                                      >  2:2015355/1‑93 (MQ=255)

                   ccTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttg                                                                      >  1:949716/1‑93 (MQ=255)

                   ccTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttg                                                                      <  1:213916/93‑1 (MQ=255)

                     ttCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggc                                                                    >  2:2238359/1‑93 (MQ=255)

                     ttCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggc                                                                    >  1:6190748/1‑93 (MQ=255)

                     ttCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggc                                                                    >  2:1673661/1‑93 (MQ=255)

                      tCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggct                                                                   >  2:51651/1‑93 (MQ=255)

                        aTAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggcttt                                                                 <  2:275835/93‑1 (MQ=255)

                         tAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCgctttggctttg                                                                <  1:276310/93‑1 (MQ=255)

                          aGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGa                                                               >  2:4993466/1‑93 (MQ=255)

                           gCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGat                                                              >  1:4374831/1‑93 (MQ=255)

                            gcccAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGata                                                             <  1:1899952/92‑1 (MQ=255)

                            ccccAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGata                                                             >  1:1574603/1‑93 (MQ=255)

                            ccccAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGata                                                             <  2:5208081/93‑1 (MQ=255)

                            ccccAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGata                                                             <  1:142356/93‑1 (MQ=255)

                            ccccAGTGAATCGGAATACCGATGGGATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCAACGCTTTGGCTTTGata                                                             >  2:1322128/1‑93 (MQ=255)

                                aGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGc                                                         >  2:1950003/1‑93 (MQ=255)

                                 gTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGcc                                                        >  2:4046036/1‑93 (MQ=255)

                                 gTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGcc                                                        >  2:3611575/1‑93 (MQ=255)

                                  tGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCa                                                       <  2:6258866/93‑1 (MQ=255)

                                  tGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCa                                                       <  2:3692015/93‑1 (MQ=255)

                                    aaTCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACg                                                     >  2:1485632/1‑93 (MQ=255)

                                       cGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGtt                                                  <  1:5264038/93‑1 (MQ=255)

                                        ggAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTg                                                 <  1:2158814/93‑1 (MQ=255)

                                         gAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTgg                                                <  2:1088984/93‑1 (MQ=255)

                                         gAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTgg                                                <  2:5949031/93‑1 (MQ=255)

                                         gAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTgg                                                >  2:5729139/1‑93 (MQ=255)

                                           aTACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTggag                                              <  1:271790/93‑1 (MQ=255)

                                           aTACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTggag                                              >  2:3928038/1‑93 (MQ=255)

                                            tACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTggagg                                             <  1:857864/93‑1 (MQ=255)

                                             aCCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTggagga                                            <  1:678873/93‑1 (MQ=255)

                                               cGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGgaga                                          >  1:1676104/1‑93 (MQ=255)

                                               cGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGgaga                                          <  1:327088/93‑1 (MQ=255)

                                                 aTGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACt                                        >  1:2425185/1‑93 (MQ=255)

                                                 aTGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACt                                        >  1:5755503/1‑93 (MQ=255)

                                                 aTGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACt                                        >  2:5893737/1‑93 (MQ=255)

                                                  tGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACtt                                       <  2:1194904/93‑1 (MQ=255)

                                                     tATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCa                                    <  2:5804141/93‑1 (MQ=255)

                                                      aTCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCAc                                   >  2:2151200/1‑93 (MQ=255)

                                                         gATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGt                                >  1:4730313/1‑93 (MQ=255)

                                                         gATATCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGt                                >  1:2044281/1‑93 (MQ=255)

                                                          atatCTTTGCCGTTCGCTTTTAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTa                               >  2:6065610/1‑93 (MQ=255)

                                                          atatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTa                               >  2:4380553/1‑93 (MQ=255)

                                                          atatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTa                               >  2:2944288/1‑93 (MQ=255)

                                                           tatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAt                              >  2:2539585/1‑93 (MQ=255)

                                                           tatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAt                              <  2:6212104/93‑1 (MQ=255)

                                                           tatCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTAt                              >  2:972881/1‑93 (MQ=255)

                                                            atCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATc                             <  1:589917/93‑1 (MQ=255)

                                                            atCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATc                             >  2:4433047/1‑93 (MQ=255)

                                                             tCTTTGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCg                            >  2:5187245/1‑93 (MQ=255)

                                                               tttGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGcc                          >  2:2387616/1‑93 (MQ=255)

                                                                ttGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGccc                         <  1:79664/93‑1 (MQ=255)

                                                                 tGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCt                        <  1:1002157/93‑1 (MQ=255)

                                                                 tGCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCt                        <  1:4002602/93‑1 (MQ=255)

                                                                  gCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTg                       >  1:3755215/1‑93 (MQ=255)

                                                                  gCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTg                       >  1:3491216/1‑93 (MQ=255)

                                                                  gCCGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTg                       <  1:5451142/93‑1 (MQ=255)

                                                                   ccGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTgg                      <  1:2514136/93‑1 (MQ=255)

                                                                    cGTTCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTggg                     >  2:4266646/1‑93 (MQ=255)

                                                                     gTTCGCTTTCAGGGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGc                    <  1:1777240/93‑1 (MQ=255)

                                                                      ttCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCa                   >  1:5118913/1‑93 (MQ=255)

                                                                      ttCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCa                   >  1:6040435/1‑93 (MQ=255)

                                                                       tCGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCaa                  <  1:3983140/93‑1 (MQ=255)

                                                                        cGCTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAAt                 <  2:2597626/93‑1 (MQ=255)

                                                                          cTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGc               >  1:5569725/1‑93 (MQ=255)

                                                                          cTTTCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGc               >  2:5472856/1‑93 (MQ=255)

                                                                             tCAGCGTGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCaa            <  2:5051870/93‑1 (MQ=255)

                                                                                   tGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTAt      >  1:5287606/1‑93 (MQ=255)

                                                                                   tGCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTAt      >  2:3410625/1‑93 (MQ=255)

                                                                                    gCGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTAtt     >  2:4627965/1‑93 (MQ=255)

                                                                                     cGAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTc    <  1:2287894/93‑1 (MQ=255)

                                                                                      gAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCg   >  2:5646787/1‑93 (MQ=255)

                                                                                      gAATGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCg   >  1:5155920/1‑93 (MQ=255)

                                                                                       aaTGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGc  <  1:4952781/93‑1 (MQ=255)

                                                                                       aaTGCGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGc  >  1:3485261/1‑93 (MQ=255)

AAAGCCTTTTTTAGCTACGCCTTCATAGCCCCAGTGAATCGGAATACCGATGGTATCGATATCTTTGCCGTTCGCTTTCAGCGTGCGAATACGTTTGGTCACCACCGCTTTGGCTTTGATATAGCCACGGTTGGAGGAGACTTTCACGGTATCGCCCTGGGCAATGCCAAGTTTATTCGC  >  NC_000913/4080442‑4080621

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`