BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,112,113	T→C	intergenic (‑61/+36)	fpr ← / ← glpX	ferredoxin‑NADP reductase/GlpX

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,112,113	0	T	C	100.0%	860.8 / NA	261	intergenic (‑61/+36)	fpr/glpX	ferredoxin‑NADP reductase/GlpX
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (142/119); total (142/119)

Only 100 of 266 total aligned reads displayed.

AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112023‑4112202

    aCTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGaa                                                                                     >  2:4675052/1‑93 (MQ=255)

      tttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAgg                                                                                   >  2:5698531/1‑93 (MQ=255)

       ttGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGa                                                                                  <  2:2057641/93‑1 (MQ=255)

        tGCCTGTTGCCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc                                                                                 <  1:3200767/93‑1 (MQ=255)

        tGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGAc                                                                                 <  2:4367870/93‑1 (MQ=255)

            tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  1:328105/1‑93 (MQ=255)

            tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             >  1:4349341/1‑93 (MQ=255)

            tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGa                                                                             <  1:4562599/93‑1 (MQ=255)

            tGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCACCGAAGGACTGGa                                                                             >  2:383027/1‑93 (MQ=255)

               tACACAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAgg                                                                          <  1:5183943/93‑1 (MQ=255)

                aCCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGc                                                                         >  1:595880/1‑93 (MQ=255)

                 cccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCt                                                                        >  2:402646/1‑93 (MQ=255)

                  ccAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTc                                                                       >  1:3833293/1‑93 (MQ=255)

                    aaTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCaa                                                                     <  1:3745313/93‑1 (MQ=255)

                     aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    <  2:4584341/93‑1 (MQ=255)

                     aTCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAAt                                                                    >  1:2597734/1‑93 (MQ=255)

                      tCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATc                                                                   >  1:5475692/1‑93 (MQ=255)

                      tCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATc                                                                   <  2:1503334/93‑1 (MQ=255)

                       cAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCg                                                                  >  1:2013320/1‑93 (MQ=255)

                        aGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGa                                                                 >  2:5194206/1‑93 (MQ=255)

                        aGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGa                                                                 >  1:2645014/1‑93 (MQ=255)

                        aGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGa                                                                 >  2:3243437/1‑93 (MQ=255)

                         gCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGat                                                                >  1:1083424/1‑93 (MQ=255)

                          ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc                                                               <  1:1481015/93‑1 (MQ=255)

                          ccATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatc                                                               >  2:3098401/1‑93 (MQ=255)

                           cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatca                                                              >  1:5961505/1‑93 (MQ=255)

                           cATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatca                                                              >  2:4899079/1‑93 (MQ=255)

                            aTGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaa                                                             >  1:4505344/1‑93 (MQ=255)

                             tGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaa                                                            >  1:4152771/1‑93 (MQ=255)

                             tGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaa                                                            <  2:3449301/93‑1 (MQ=255)

                             tGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaa                                                            >  1:635301/1‑93 (MQ=255)

                             tGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaa                                                            >  2:75631/1‑93 (MQ=255)

                              gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat                                                           >  2:2564812/1‑93 (MQ=255)

                              gTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaat                                                           >  2:5743545/1‑93 (MQ=255)

                                 tttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatcaa                                                        <  1:2536912/93‑1 (MQ=255)

                                 tttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatcaa                                                        <  1:1753580/93‑1 (MQ=255)

                                 tttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatcaa                                                        <  2:5873007/93‑1 (MQ=255)

                                 tttCTCCTGTTTTGATTGACTTGCCTTATCTACGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGatcaaatcaa                                                        <  1:2757326/93‑1 (MQ=255)

                                  ttCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAaatcaat                                                       <  1:5304170/93‑1 (MQ=255)

                                    ctcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAatcaatca                                                     <  1:104813/93‑1 (MQ=255)

                                     tcCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCag                                                    >  2:6199717/1‑93 (MQ=255)

                                      ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   >  2:1170468/1‑93 (MQ=255)

                                      ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   >  1:5115720/1‑93 (MQ=255)

                                      ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   >  1:3640460/1‑93 (MQ=255)

                                      ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   <  1:69792/93‑1 (MQ=255)

                                      ccTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCaga                                                   <  1:5083080/93‑1 (MQ=255)

                                       cTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCagag                                                  <  1:2840098/93‑1 (MQ=255)

                                        tGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAgg                                                 >  2:5370269/1‑93 (MQ=255)

                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  2:4119195/93‑1 (MQ=255)

                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                >  1:566216/1‑93 (MQ=255)

                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  1:2253444/93‑1 (MQ=255)

                                         gTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGa                                                <  2:1360039/93‑1 (MQ=255)

                                          ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt                                               <  2:2491234/93‑1 (MQ=255)

                                          ttttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAt                                               >  1:6219542/1‑93 (MQ=255)

                                           tttGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtg                                              <  2:6020421/93‑1 (MQ=255)

                                            ttgattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCTCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtgt                                             >  1:6091410/1‑93 (MQ=255)

                                            ttgattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtgt                                             >  1:2347018/1‑93 (MQ=255)

                                            ttgattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGAtgt                                             >  2:2053960/1‑93 (MQ=255)

                                              gattgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGc                                           >  1:6199503/1‑93 (MQ=255)

                                               attgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCa                                          >  2:2256734/1‑93 (MQ=255)

                                                ttgaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCAc                                         <  1:4048803/93‑1 (MQ=255)

                                                  gagttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCATCt                                       <  1:3417637/90‑1 (MQ=255)

                                                  gaCTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCt                                       <  1:2995569/93‑1 (MQ=255)

                                                    cTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGc                                     <  1:4670804/93‑1 (MQ=255)

                                                    cTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAACCAATCAGAGGATGTGCACCTGc                                     <  2:2366101/93‑1 (MQ=255)

                                                     ttGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGCCTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCa                                    >  1:172953/1‑93 (MQ=255)

                                                       gCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCAtt                                  >  2:4809441/1‑93 (MQ=255)

                                                         cTTATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTc                                <  1:5583401/93‑1 (MQ=255)

                                                          ttATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCACATCAATCAGAGGATGTGCACCTGCATTTcc                               >  1:3064753/1‑93 (MQ=255)

                                                           tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCg                              >  2:5415268/1‑93 (MQ=255)

                                                           tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCg                              <  2:1309794/93‑1 (MQ=255)

                                                           tATCTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCg                              >  2:6301866/1‑93 (MQ=255)

                                                              cTTCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGt                           >  1:1266514/1‑93 (MQ=255)

                                                               ttCGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTc                          >  1:1683979/1‑93 (MQ=255)

                                                                 cGTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCtt                        <  2:3344348/93‑1 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       >  2:2845394/1‑93 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       <  1:1875259/93‑1 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       <  2:5941456/93‑1 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       <  1:5018612/93‑1 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       <  2:1930064/93‑1 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCttt                       <  2:726565/93‑1 (MQ=255)

                                                                  gTTCTCCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCCGGGCttt                       >  1:5367954/1‑93 (MQ=255)

                                                                    tctcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGc                     >  1:1793538/1‑93 (MQ=255)

                                                                     ctcCGAACAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCg                    >  2:1610118/1‑93 (MQ=255)

                                                                         gAACAAAAAAATTCCAGCCCCGAAGTACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATcc                <  1:3136658/93‑1 (MQ=255)

                                                                          aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa               <  1:1015301/93‑1 (MQ=255)

                                                                          aaCAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCa               <  2:1683470/93‑1 (MQ=255)

                                                                            cAAAAAAATTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGa             <  2:265651/93‑1 (MQ=255)

                                                                             aaaaaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGAt            <  1:1564124/93‑1 (MQ=255)

                                                                                aaaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGt         <  1:5727866/93‑1 (MQ=255)

                                                                                 aaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCCGATAGtg        <  2:5984196/93‑1 (MQ=255)

                                                                                 aaaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtg        <  2:5599486/93‑1 (MQ=255)

                                                                                  aaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtgg       >  1:2120973/1‑93 (MQ=255)

                                                                                  aaTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtgg       <  2:4243537/93‑1 (MQ=255)

                                                                                   aTTCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtgga      <  2:5315416/93‑1 (MQ=255)

                                                                                    ttCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggat     >  2:2975896/1‑93 (MQ=255)

                                                                                     tCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatg    <  1:1544758/93‑1 (MQ=255)

                                                                                     tCCAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatg    <  2:3548625/93‑1 (MQ=255)

                                                                                       cAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatgga  >  1:3929883/1‑93 (MQ=255)

                                                                                       cAGCCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGtggatgga  <  2:4304828/93‑1 (MQ=255)

AGTGACTTTGCCTGTTACCCAATCAGCCATGTTTTTCTCCTGTTTTGATTGACTTGCCTTATCTTCGTTCTCCGAACAAAAAAATTCCAGTCCCGAAGGACTGGAAGGCTCAATCGATCAAATCAATCAGAGGATGTGCACCTGCATTTCCGGGTCTTTGCGATCCAGATAGTGGATGGA  >  NC_000913/4112023‑4112202

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`