BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,116,372	T→C	intergenic (+32/+53)	yiiU → / ← menG	hypothetical protein/MenG

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,116,372	0	T	C	100.0%	799.5 / NA	245	intergenic (+32/+53)	yiiU/menG	hypothetical protein/MenG
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (110/135); total (110/135)

Only 100 of 255 total aligned reads displayed.

AGCAGAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACTGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATC  >  NC_000913/4116282‑4116461

  cagAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCgtgt                                                                                       <  1:1715059/93‑1 (MQ=255)

   agAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTa                                                                                      <  1:986059/93‑1 (MQ=255)

    gAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAg                                                                                     >  2:1714887/1‑93 (MQ=255)

     aaCGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAgg                                                                                    >  1:2020661/1‑93 (MQ=255)

         gCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCaa                                                                                >  1:118773/1‑93 (MQ=255)

         gCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCaa                                                                                >  2:4248263/1‑93 (MQ=255)

          cTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAAc                                                                               <  1:1735280/93‑1 (MQ=255)

             gCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAgg                                                                            <  2:2574519/93‑1 (MQ=255)

             gCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAgg                                                                            <  2:3331992/93‑1 (MQ=255)

                ggAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTaa                                                                         >  1:6098940/1‑93 (MQ=255)

                ggAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTaa                                                                         >  2:41135/1‑93 (MQ=255)

                  aaCGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACg                                                                       >  2:5520445/1‑93 (MQ=255)

                  aaCGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACg                                                                       >  2:2149796/1‑93 (MQ=255)

                  aaCGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACg                                                                       <  1:1920358/93‑1 (MQ=255)

                   aCGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGc                                                                      <  2:5665593/93‑1 (MQ=255)

                   aCGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGc                                                                      <  1:2739127/93‑1 (MQ=255)

                   aCGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGc                                                                      <  2:5148233/93‑1 (MQ=255)

                   aCGTCTACAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGc                                                                      >  2:4445485/1‑93 (MQ=255)

                     gTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAg                                                                    <  1:5250343/93‑1 (MQ=255)

                      tCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGa                                                                   <  2:2239024/93‑1 (MQ=255)

                      tCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGa                                                                   >  1:415930/1‑93 (MQ=255)

                        tGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGaaa                                                                 >  1:2337203/1‑93 (MQ=255)

                         gCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGaaaa                                                                >  1:2974453/1‑93 (MQ=255)

                            ggCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAg                                                             >  2:623956/1‑93 (MQ=255)

                            ggCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAg                                                             >  2:2713819/1‑93 (MQ=255)

                             gCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAgg                                                            <  2:6071662/93‑1 (MQ=255)

                             gCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAgg                                                            <  2:5719872/93‑1 (MQ=255)

                              cccTGCTGCGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGc                                                           <  2:1111400/93‑1 (MQ=255)

                               ccTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCa                                                          >  1:4660548/1‑93 (MQ=255)

                                ctgctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCAc                                                         <  2:5290572/93‑1 (MQ=255)

                                 tgctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAACAAGGCAcc                                                        >  2:3136558/1‑93 (MQ=255)

                                 tgctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCAcc                                                        <  1:632233/93‑1 (MQ=255)

                                 tgctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCAcc                                                        <  1:1534168/93‑1 (MQ=255)

                                  gctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCt                                                       <  2:3087489/93‑1 (MQ=255)

                                  gctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCt                                                       <  2:4999525/93‑1 (MQ=255)

                                   ctgGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCtt                                                      <  2:5854377/93‑1 (MQ=255)

                                      ggTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCg                                                   >  2:1573522/1‑93 (MQ=255)

                                       gTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCgg                                                  <  1:1053689/93‑1 (MQ=255)

                                       gTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCgg                                                  <  1:5457375/93‑1 (MQ=255)

                                            aTGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAACGCACCTTGCGGTGGCt                                             >  2:1943852/1‑93 (MQ=255)

                                             tGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCtt                                            >  2:2634384/1‑93 (MQ=255)

                                               gAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTc                                          >  2:2050074/1‑93 (MQ=255)

                                               gAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTc                                          <  1:4202326/93‑1 (MQ=255)

                                               gAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTc                                          <  1:2218801/93‑1 (MQ=255)

                                               gAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTc                                          >  1:453580/1‑93 (MQ=255)

                                                aaGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCt                                         <  1:4727795/93‑1 (MQ=255)

                                                aaGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCCTGCGGGGGCTTTCt                                         >  2:5393487/1‑93 (MQ=255)

                                                 agagGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCtt                                        >  1:2419692/1‑93 (MQ=255)

                                                  gagGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTa                                       <  1:258400/93‑1 (MQ=255)

                                                    ggTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATc                                     >  2:1795556/1‑93 (MQ=255)

                                                    ggTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGACAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATc                                     >  2:1740406/1‑93 (MQ=255)

                                                     gTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCa                                    <  1:5906963/93‑1 (MQ=255)

                                                       cTGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCAtt                                  >  2:1884397/1‑93 (MQ=255)

                                                        tGATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTc                                 >  2:2488127/1‑93 (MQ=255)

                                                         gATTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCa                                <  2:4628240/93‑1 (MQ=255)

                                                          aTTACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCaa                               >  1:6235060/1‑93 (MQ=255)

                                                           ttACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAat                              <  2:3970563/93‑1 (MQ=255)

                                                           ttACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAat                              <  2:2910349/93‑1 (MQ=255)

                                                           ttACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAat                              >  1:3738030/1‑93 (MQ=255)

                                                            tACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAata                             <  1:4461927/93‑1 (MQ=255)

                                                            tACGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAata                             <  1:3526379/93‑1 (MQ=255)

                                                              cGCTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATc                           <  2:3894870/93‑1 (MQ=255)

                                                                cTTCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCa                         <  1:3079944/93‑1 (MQ=255)

                                                                 ttCATCTTCCGTGTAATTTCTTTGCTGTGTAGCCCAACAGGTAACGCAGAAAAAAGGCACCTCGCGGTGGGTTTCTTATCAATCAATATCCAg                        <  2:2357225/93‑1 (MQ=255)

                                                                 ttCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCCTCCGGGGCCTTTCTTCTTATTTAatattcca                        >  1:3418669/1‑89 (MQ=255)

                                                                  tCATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGc                       <  2:2306797/93‑1 (MQ=255)

                                                                   cATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCg                      <  1:5036943/93‑1 (MQ=255)

                                                                   cATCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCCTGCGGTGCCTTTCTTTTTATTCAATATTCAGCg                      >  2:5547728/1‑93 (MQ=255)

                                                                    aTCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCgg                     <  1:2787913/93‑1 (MQ=255)

                                                                    aTCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCgg                     >  2:666407/1‑93 (MQ=255)

                                                                    aTCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAACgg                     >  1:3956668/1‑93 (MQ=255)

                                                                    aTCTGCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCgg                     <  1:2910577/93‑1 (MQ=255)

                                                                     tCTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTTAATATCCAGCGGa                    >  2:3656394/1‑93 (MQ=255)

                                                                      cTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAt                   <  1:6036921/93‑1 (MQ=255)

                                                                      cTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAt                   <  1:3234495/93‑1 (MQ=255)

                                                                      cTTCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAt                   <  1:5121749/93‑1 (MQ=255)

                                                                        tCCGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtct                 >  2:2101558/1‑93 (MQ=255)

                                                                         ccGCGTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtctt                <  2:774251/93‑1 (MQ=255)

                                                                           gcgTAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGAtcttct              >  1:5688845/1‑93 (MQ=255)

                                                                              tAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGaa           >  1:4941737/1‑93 (MQ=255)

                                                                              tAATTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCCTTGGGGGGCTTTCTTTTTATTCAATATCCAACGGATCTTCTGaa           >  1:75888/1‑93 (MQ=255)

                                                                               aaTTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGaaa          <  1:824989/93‑1 (MQ=255)

                                                                               aaTTTCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGaaa          <  1:2173867/93‑1 (MQ=255)

                                                                                 tttCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATTCAGCGGATCTTCTGAAAGa        >  1:2641344/1‑93 (MQ=255)

                                                                                 tttCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGa        >  2:5620477/1‑93 (MQ=255)

                                                                                  ttCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaa       <  2:3191008/93‑1 (MQ=255)

                                                                                  ttCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaa       <  1:4045292/93‑1 (MQ=255)

                                                                                  ttCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaa       <  2:1641640/93‑1 (MQ=255)

                                                                                   tCTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaat      <  2:2938938/93‑1 (MQ=255)

                                                                                    ctgtACCGTGTAGACCAACAGGTGACGCAGAAACAAGGCACCTTGCGGTGCGTTGCATATCATCCAATATCCAGCGGATCATCTGAAAAaata     <  2:1458518/90‑1 (MQ=255)

                                                                                    cTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaata     >  2:3642001/1‑93 (MQ=255)

                                                                                    cTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaata     <  1:147162/93‑1 (MQ=255)

                                                                                    cTTTACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaata     <  1:232725/93‑1 (MQ=255)

                                                                                     tttACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCCGAAAGaataa    <  2:3523911/93‑1 (MQ=255)

                                                                                      ttACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaataat   <  2:922830/93‑1 (MQ=255)

                                                                                      ttACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGaataat   <  2:1219489/93‑1 (MQ=255)

                                                                                       tACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATc  >  2:602046/1‑93 (MQ=255)

                                                                                       tACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATc  <  2:2006093/93‑1 (MQ=255)

                                                                                       tACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATc  <  1:5671886/93‑1 (MQ=255)

                                                                                       tACCGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATc  >  2:4698690/1‑93 (MQ=255)

AGCAGAACGGCTGGCAGGAACGTCTGCAGGCCCTGCTGGGTCGCATGGAAGAGGTCTGATTACGCTTCATCTTCCGCGTAATTTCTTTACTGTGTAGGCCAACAGGTAACGCAGAAAAAAGGCACCTTGCGGTGCCTTTCTTATCATTCAATATCCAGCGGATCTTCTGAAAGAATAATC  >  NC_000913/4116282‑4116461

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`