Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,149,200 G→A A493V (GCG→GTG)  ppc ← phosphoenolpyruvate carboxylase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,149,2000GA99.6% 891.4 / NA 253A493V (GCG→GTG) ppcphosphoenolpyruvate carboxylase
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base A (121/130);  total (121/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 260 total aligned reads displayed.

TTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCGCTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTGCT  >  NC_000913/4149110‑4149289
                                                                                          |                                                                                         
ttGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCAct                                                                                         >  2:4675215/1‑93 (MQ=255)
    gcagcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCActtctt                                                                                     <  1:5273445/93‑1 (MQ=255)
      agcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTc                                                                                   <  1:2281588/93‑1 (MQ=255)
       gcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcc                                                                                  >  1:2143404/1‑92 (MQ=255)
       gcTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTca                                                                                  <  1:4920764/93‑1 (MQ=255)
         tGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagc                                                                                >  1:4771791/1‑93 (MQ=255)
         tGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagc                                                                                <  1:2846935/93‑1 (MQ=255)
         tGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagc                                                                                >  2:31801/1‑93 (MQ=255)
          gggTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagca                                                                               >  1:3549059/1‑93 (MQ=255)
          gggTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagca                                                                               <  1:390006/93‑1 (MQ=255)
          gggTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagca                                                                               >  2:4292597/1‑93 (MQ=255)
          gggTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGAAACCGGCATCGCACACCCGATACCCACTTTTTTcagca                                                                               >  1:3852350/1‑93 (MQ=255)
            gTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagc                                                                             <  1:4086587/93‑1 (MQ=255)
             tCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagca                                                                            <  1:2370688/93‑1 (MQ=255)
             tCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagca                                                                            <  1:6211149/93‑1 (MQ=255)
              cATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagcag                                                                           <  2:1099197/93‑1 (MQ=255)
              cATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagcag                                                                           <  2:3539870/93‑1 (MQ=255)
              cATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagcag                                                                           <  2:3583960/93‑1 (MQ=255)
              cATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagcag                                                                           <  2:4476774/93‑1 (MQ=255)
               aTGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAgg                                                                          <  2:232954/93‑1 (MQ=255)
               aTGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAgg                                                                          <  1:5496069/93‑1 (MQ=255)
               aTGACACCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTcagcagcacg                                                                          <  2:3974657/93‑3 (MQ=255)
                tGACATCGTTGGCGTTGTTCAGGTCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGt                                                                         >  1:1039141/1‑93 (MQ=255)
                tGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGt                                                                         >  1:4179634/1‑93 (MQ=255)
                tGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGt                                                                         >  2:4135971/1‑93 (MQ=255)
                 gACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTg                                                                        >  2:304450/1‑93 (MQ=255)
                 gACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTg                                                                        >  2:3286455/1‑93 (MQ=255)
                  aCATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTgg                                                                       <  1:5623627/93‑1 (MQ=255)
                    aTCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGGGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGaa                                                                     >  1:4441340/1‑92 (MQ=255)
                    aTCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGAc                                                                     >  1:3252861/1‑93 (MQ=255)
                      cGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAg                                                                   <  2:2647560/93‑1 (MQ=255)
                       gTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGc                                                                  >  2:3785268/1‑93 (MQ=255)
                        ttGGCGTTGTTCAGATCATCGAGGGATTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGcc                                                                 >  1:3199321/1‑93 (MQ=255)
                         tGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAACCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCa                                                                <  2:2528388/93‑1 (MQ=255)
                         tGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACACCCa                                                                >  1:3949397/1‑93 (MQ=255)
                           gCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGt                                                              >  1:2672979/1‑93 (MQ=255)
                           gCGTTGTTCAGATCACCGAGGGTTTCAAACAGCGGAGCAACCGGCATTGCAAACCCGATACCCACTTCGTTCAGCAGCAGGTGAACAGCCAGt                                                              <  2:5852693/93‑1 (MQ=255)
                            cGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTa                                                             <  1:4869641/93‑1 (MQ=255)
                                gttCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTc                                                         >  2:2749754/1‑93 (MQ=255)
                                gttCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTc                                                         <  2:1472442/93‑1 (MQ=255)
                                 ttCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCg                                                        <  1:1850341/93‑1 (MQ=255)
                                 ttCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCg                                                        >  1:2628368/1‑93 (MQ=255)
                                  tCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCgg                                                       <  1:309068/93‑1 (MQ=255)
                                   cAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGa                                                      <  2:3063483/93‑1 (MQ=255)
                                    aGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGAc                                                     >  2:6207383/1‑93 (MQ=255)
                                     gATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACg                                                    >  1:150527/1‑93 (MQ=255)
                                     gATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACg                                                    <  1:4008393/93‑1 (MQ=255)
                                     gATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACg                                                    >  2:4337755/1‑93 (MQ=255)
                                     gATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACg                                                    <  2:2169599/93‑1 (MQ=255)
                                         atcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGt                                                >  1:5107739/1‑93 (MQ=255)
                                          tcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtt                                               >  2:1673320/1‑93 (MQ=255)
                                          tcGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtt                                               >  1:5170030/1‑93 (MQ=255)
                                           cGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGttt                                              <  1:632609/93‑1 (MQ=255)
                                           cGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGttt                                              >  2:5344607/1‑93 (MQ=255)
                                            gAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGCAGGCGtttt                                             >  1:6053972/1‑93 (MQ=255)
                                            gAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtttt                                             >  1:5790485/1‑93 (MQ=255)
                                            gAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGtttt                                             >  1:4996547/1‑93 (MQ=255)
                                               ggTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGc                                          >  2:4839513/1‑93 (MQ=255)
                                                gTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGcc                                         <  1:3647512/93‑1 (MQ=255)
                                                 tttCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCa                                        >  2:6007356/1‑93 (MQ=255)
                                                  ttCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCAt                                       <  2:1216059/93‑1 (MQ=255)
                                                     aaaCAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCga                                    >  2:4585130/1‑93 (MQ=255)
                                                     aaaCAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCga                                    <  1:916037/93‑1 (MQ=255)
                                                      aaCAGCGGAGAAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCgag                                   >  2:1869774/1‑93 (MQ=255)
                                                       aCAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCgaga                                  <  2:4929117/93‑1 (MQ=255)
                                                        cAGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGAt                                 <  1:4710415/93‑1 (MQ=255)
                                                        cAGCGGAGCAACCGGCAGCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGAt                                 <  1:678564/93‑1 (MQ=255)
                                                         aGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATc                                <  1:2094194/93‑1 (MQ=255)
                                                         aGCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATc                                <  2:6273155/93‑1 (MQ=255)
                                                          gCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCa                               <  1:3418208/93‑1 (MQ=255)
                                                          gCGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCa                               <  2:2057745/93‑1 (MQ=255)
                                                           cGGAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCAc                              <  2:5631088/93‑1 (MQ=255)
                                                             gAGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGt                            >  2:761419/1‑93 (MQ=255)
                                                              aGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTa                           <  1:28702/93‑1 (MQ=255)
                                                              aGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTa                           <  2:5895311/93‑1 (MQ=255)
                                                              aGCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTa                           >  1:2537543/1‑93 (MQ=255)
                                                               gCAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAg                          <  1:5348900/93‑1 (MQ=255)
                                                                cAACCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAgg                         <  2:6183423/93‑1 (MQ=255)
                                                                 aaCCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGATATCACGTAggc                        >  2:6080773/1‑93 (MQ=255)
                                                                 aaCCGGCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAggg                        >  1:5467279/1‑92 (MQ=255)
                                                                     ggCATCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCa                    >  1:1748146/1‑93 (MQ=255)
                                                                        aTCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCCTCGAGATCCCGTAGGCGGCAATg                 >  2:1547781/1‑93 (MQ=255)
                                                                        aTCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATg                 <  1:5652723/93‑1 (MQ=255)
                                                                         tCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATgg                <  2:2494346/93‑1 (MQ=255)
                                                                         tCGCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATgg                >  1:4208035/1‑93 (MQ=255)
                                                                           gCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAg              <  2:900886/93‑1 (MQ=255)
                                                                           gCAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAg              <  1:2698430/93‑1 (MQ=255)
                                                                            cAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGc             >  2:1042717/1‑93 (MQ=255)
                                                                            cAAACCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGc             >  1:1359331/1‑93 (MQ=255)
                                                                              aaCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCt           <  1:2993738/93‑1 (MQ=255)
                                                                               aCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCtt          >  2:2979286/1‑93 (MQ=255)
                                                                               aCCCGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCtt          >  1:2941119/1‑93 (MQ=255)
                                                                                cccGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTg         >  1:5120501/1‑93 (MQ=255)
                                                                                 ccGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTgg        >  1:1605406/1‑92 (MQ=255)
                                                                                 ccGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGc        <  2:3144136/93‑1 (MQ=255)
                                                                                 ccGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGc        <  1:1256471/93‑1 (MQ=255)
                                                                                  cGATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCg       <  1:3401095/93‑1 (MQ=255)
                                                                                   gATACCCACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGGCGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCgg      <  1:3706358/93‑1 (MQ=255)
                                                                                     tACCCACTTCTTTCAGCAGTAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTg    >  2:6161006/1‑93 (MQ=255)
                                                                                       cccACTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTGCt  <  2:5224066/93‑1 (MQ=255)
                                                                                          |                                                                                         
TTGAGCAGCTGGGTCATGACATCGTTGGCGTTGTTCAGATCATCGAGGGTTTCAAACAGCGGAGCAACCGGCATCGCAAACCCGATACCCGCTTCTTTCAGCAGCAGGTGGACAGCCAGTACGTCGGACGGCGTTTTCGCCATCGAGATCACGTAGGCGGCAATGGAGCCTTGCGGTGCT  >  NC_000913/4149110‑4149289

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 28 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: