BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,227,795	A→G	intergenic (‑74/‑138)	pepE ← / → yjbC	peptidase E/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,227,795	0	A	G	100.0%	771.1 / NA	242	intergenic (‑74/‑138)	pepE/yjbC	peptidase E/hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (135/107); total (135/107)

Only 100 of 269 total aligned reads displayed.

AATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT  >  NC_000913/4227705‑4227884

aaTAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTcgcg                                                                                         >  2:1348667/1‑93 (MQ=255)

aaTAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTcgcg                                                                                         >  1:2739272/1‑93 (MQ=255)

aaTAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTcgcg                                                                                         >  1:6180458/1‑93 (MQ=255)

  tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAt                                                                                       >  2:3800349/1‑93 (MQ=255)

  tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAt                                                                                       >  1:4191900/1‑93 (MQ=255)

  tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGAt                                                                                       <  1:36790/93‑1 (MQ=255)

  tAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACC‑CTGCGAATTTAACCACTTACTGACATGGCTCGCGGTg                                                                                      >  2:5869779/1‑93 (MQ=255)

   aaaaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATg                                                                                      <  1:5552547/93‑1 (MQ=255)

    aaaGCAGTTCCATTACTTCTCCGGTGAGTAAGAAAGCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGt                                                                                     <  1:1679654/93‑1 (MQ=255)

     aaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTc                                                                                    >  1:4020937/1‑93 (MQ=255)

     aaGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTc                                                                                    >  2:5505022/1‑93 (MQ=255)

       gCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGc                                                                                  >  1:4635304/1‑93 (MQ=255)

         aGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCgtcc                                                                                >  2:3110341/1‑90 (MQ=255)

          gTTCCTTTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGGGATGTCGcaca                                                                               >  1:5221847/1‑93 (MQ=255)

          gTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGGTGTAGcaca                                                                               >  1:5137039/1‑93 (MQ=255)

          gTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTGGccca                                                                               >  1:4316549/1‑93 (MQ=255)

          gTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGcaca                                                                               >  2:701524/1‑93 (MQ=255)

           ttCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAt                                                                              >  2:3998563/1‑93 (MQ=255)

           ttCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAt                                                                              <  1:760856/93‑1 (MQ=255)

            tCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAtt                                                                             <  2:3321624/93‑1 (MQ=255)

              cATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGc                                                                           >  1:1926359/1‑93 (MQ=255)

               aTTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCt                                                                          <  2:320051/93‑1 (MQ=255)

                 tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCTATGTCGCACATTGCTTc                                                                        <  2:4192810/93‑1 (MQ=255)

                 tACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTc                                                                        >  2:47064/1‑93 (MQ=255)

                  aCTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCt                                                                       >  2:1836442/1‑93 (MQ=255)

                   cTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTg                                                                      <  2:5187159/93‑1 (MQ=255)

                    ttCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTgg                                                                     >  2:6259212/1‑93 (MQ=255)

                    ttCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGGCGCACATTGCCTCTgg                                                                     >  1:3094120/1‑93 (MQ=255)

                     tctcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGa                                                                    >  2:4254139/1‑93 (MQ=255)

                     tctcCCGTTAGTAAGAAATCACGGGAGGCATGCTACTACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGa                                                                    <  1:641061/93‑1 (MQ=255)

                      ctcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTggga                                                                   >  1:5304581/1‑91 (MQ=255)

                       tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGaaa                                                                  >  2:4438094/1‑93 (MQ=255)

                       tcCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGaaa                                                                  >  2:1704624/1‑93 (MQ=255)

                           gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                              <  2:137985/93‑1 (MQ=255)

                           gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                              <  1:4108061/93‑1 (MQ=255)

                           gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                              >  1:4441911/1‑93 (MQ=255)

                           gTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGa                                                              >  1:1810909/1‑93 (MQ=255)

                            ttAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAt                                                             >  1:5921268/1‑93 (MQ=255)

                              aGTAAGAAATCACGGGAGGCATGCTACCACTGCTAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAttt                                                           <  1:2226572/93‑1 (MQ=255)

                              aGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAttt                                                           <  2:895404/93‑1 (MQ=255)

                              aGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAttt                                                           <  2:2336485/93‑1 (MQ=255)

                              aGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGAttt                                                           >  2:5285009/1‑93 (MQ=255)

                               gTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTg                                                          >  2:4596614/1‑93 (MQ=255)

                               gTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAATGCTTCTGGGAAGTGATTTg                                                          >  1:5658473/1‑93 (MQ=255)

                                tAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGa                                                         >  1:4884830/1‑93 (MQ=255)

                                 aaGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAg                                                        <  1:2509564/93‑1 (MQ=255)

                                 aaGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAg                                                        <  1:237804/93‑1 (MQ=255)

                                 aaGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAg                                                        >  2:4132085/1‑93 (MQ=255)

                                  aGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGc                                                       <  1:3124303/93‑1 (MQ=255)

                                  aGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGc                                                       <  2:1036719/93‑1 (MQ=255)

                                    aaaTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGTCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAg                                                     <  2:5536123/93‑1 (MQ=255)

                                    aaaTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAg                                                     <  1:1378954/93‑1 (MQ=255)

                                    aaaTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAg                                                     <  2:6080312/93‑1 (MQ=255)

                                      aTCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGt                                                   >  2:53157/1‑93 (MQ=255)

                                       tCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTa                                                  >  1:1325798/1‑93 (MQ=255)

                                        cACGGGAGGCATGCTGCCACTGCGAATTTAACCACCTGCTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTaa                                                 <  2:5219039/93‑1 (MQ=255)

                                         aCGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAc                                                <  2:5665978/93‑1 (MQ=255)

                                            ggAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGGAAGTGATTTGAGCAGGTAACGaa                                             >  1:1860345/1‑93 (MQ=255)

                                               ggCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTc                                          <  2:5658473/93‑1 (MQ=255)

                                               ggCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTc                                          >  2:4562484/1‑93 (MQ=255)

                                                gCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCa                                         <  1:1510987/93‑1 (MQ=255)

                                                  aTGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAg                                       <  1:4409031/93‑1 (MQ=255)

                                                  aTGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAg                                       >  2:5067556/1‑93 (MQ=255)

                                                  aTGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAg                                       >  1:3603765/1‑93 (MQ=255)

                                                   tGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAAAGAATTCAAGc                                      >  1:92484/1‑93 (MQ=255)

                                                   tGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTCGAAAGTGATTTGAGCAGGTAACGAATTCAAGc                                      >  1:3773556/1‑93 (MQ=255)

                                                    gCTACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGcc                                     <  1:603370/93‑1 (MQ=255)

                                                      tACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCaa                                   >  1:3366600/1‑93 (MQ=255)

                                                      tACCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCaa                                   >  2:2185205/1‑93 (MQ=255)

                                                      tACCACTGCAAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCaa                                   <  2:1425916/93‑1 (MQ=255)

                                                       aCCACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCCCATTGCTTCTGGAAAGTGATTTGAGCAGGTAAAGAATTCAAGCCAAt                                  >  2:2823202/1‑93 (MQ=255)

                                                         cACTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATgg                                >  2:4914100/1‑93 (MQ=255)

                                                          aCTGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGa                               <  1:723976/93‑1 (MQ=255)

                                                            tGCGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGaaa                             >  1:301113/1‑93 (MQ=255)

                                                              cGAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATa                           <  1:2279362/93‑1 (MQ=255)

                                                               gAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATaa                          >  1:6147713/1‑93 (MQ=255)

                                                               gAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATaa                          >  2:2733750/1‑93 (MQ=255)

                                                               gAATTTAACCACTTACTGACATGGCTCGCGATGTCGCACAATGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATaa                          >  1:1544735/1‑93 (MQ=255)

                                                                 aTTTAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGGAACGAATTCAAGCCAATGGAAATAACa                        >  1:478533/1‑93 (MQ=255)

                                                                  tttAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaa                       >  1:5003447/1‑93 (MQ=255)

                                                                   ttAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACaaa                      <  1:5368246/93‑1 (MQ=255)

                                                                    tAACCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAAt                     <  2:2995365/93‑1 (MQ=255)

                                                                     aaCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATa                    <  2:2650241/93‑1 (MQ=255)

                                                                      aCCACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAg                   >  2:5439033/1‑93 (MQ=255)

                                                                        cACTTACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGtt                 >  2:1758267/1‑93 (MQ=255)

                                                                        cACTTACTGACATGGCTCGCGATATCACACATTGCTTCTGGGAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGtt                 >  2:25911/1‑93 (MQ=255)

                                                                        cACTTACTGACATGGCTCGAGAGGTCGCACATTGCTTGTGAAAGGTGATTAGAGCAAGTAACGAATTCAAGCCAATGGAAATAACAAATAGtt                 <  2:1121561/93‑1 (MQ=255)

                                                                           ttACTGACATGGCTCGCGATGTCGCACATTGCTTCTGAAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGc              <  1:2603290/93‑1 (MQ=255)

                                                                            tACTGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCt             >  1:5072996/1‑93 (MQ=255)

                                                                               tGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAt          >  1:4066538/1‑93 (MQ=255)

                                                                               tGACATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCAt          >  2:2926682/1‑93 (MQ=255)

                                                                                 aCATGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGa        >  1:3441192/1‑93 (MQ=255)

                                                                                  cATGGCTCGCGATGTCGCACATTGCTTCTGGGAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGAc       >  1:4531995/1‑93 (MQ=255)

                                                                                   aTGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACt      >  2:1209957/1‑93 (MQ=255)

                                                                                   aTGGCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACt      >  1:2072039/1‑93 (MQ=255)

                                                                                     ggCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTAt    <  1:3317766/93‑1 (MQ=255)

                                                                                     ggCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTAt    >  2:3624202/1‑93 (MQ=255)

                                                                                     ggCTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTAt    >  2:1584399/1‑93 (MQ=255)

                                                                                     ggCTCGCGATGGCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGGAACGAATTCAAGCCCATGGAAATAACAAATAGTTCGCTCATGACTAt    >  2:2408484/1‑93 (MQ=255)

                                                                                       cTCGCGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTAttt  <  2:5160801/93‑1 (MQ=255)

AATAAAAGCAGTTCCATTACTTCTCCGGTTAGTAAGAAATCACGGGAGGCATGCTACCACTGCGAATTTAACCACTTACTGACATGGCTCACGATGTCGCACATTGCTTCTGGAAAGTGATTTGAGCAGGTAACGAATTCAAGCCAATGGAAATAACAAATAGTTCGCTCATGACTATTT  >  NC_000913/4227705‑4227884

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 18 ≤` `ATCG/ATCG` `< 26 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`