Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,307,603 T→C E319E (GAA→GAG yjcW ← putative ATP‑binding component of a transport system

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,307,6030TC99.6% 735.6 / ‑5.9 231E319E (GAA→GAGyjcWputative ATP‑binding component of a transport system
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base C (115/115);  minor base A (1/0);  total (116/115)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 245 total aligned reads displayed.

ATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTC  >  NC_000913/4307513‑4307692
                                                                                          |                                                                                         
   ccGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTcc                                                                                      >  1:1189589/1‑93 (MQ=255)
      gcggcTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGcc                                                                                   >  1:1480369/1‑93 (MQ=255)
       cgtcTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCa                                                                                  <  2:2472248/90‑1 (MQ=255)
       cggcTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTTCGCCa                                                                                  >  2:2400434/1‑93 (MQ=255)
         gcTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAgc                                                                                >  2:1157914/1‑93 (MQ=255)
            ttCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGcgcg                                                                             >  1:4875809/1‑93 (MQ=255)
             tCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGt                                                                            >  2:5289398/1‑93 (MQ=255)
             tCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGt                                                                            <  2:4114874/93‑1 (MQ=255)
              cAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGtt                                                                           >  1:3290175/1‑93 (MQ=255)
              cAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGtt                                                                           <  2:3330422/93‑1 (MQ=255)
                gTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTa                                                                         <  1:4506856/93‑1 (MQ=255)
                gTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTa                                                                         <  2:5618405/93‑1 (MQ=255)
                  gATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATc                                                                       <  2:4695580/93‑1 (MQ=255)
                  gATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATc                                                                       >  2:481678/1‑93 (MQ=255)
                  gATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATc                                                                       <  1:4089962/93‑1 (MQ=255)
                  gATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATc                                                                       <  1:3104667/93‑1 (MQ=255)
                        aGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGcc                                                                 >  1:3987489/1‑93 (MQ=255)
                         gCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCa                                                                >  2:6175639/1‑93 (MQ=255)
                           cATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCaaa                                                              >  1:2995542/1‑93 (MQ=255)
                            aTCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAAc                                                             >  1:981585/1‑93 (MQ=255)
                             tCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACa                                                            <  1:3444068/93‑1 (MQ=255)
                             tCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACa                                                            >  1:4157028/1‑93 (MQ=255)
                             tCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACa                                                            <  2:2618509/93‑1 (MQ=255)
                             tCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACa                                                            >  1:4735852/1‑93 (MQ=255)
                               ccTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGa                                                          >  1:3568016/1‑93 (MQ=255)
                               ccTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGa                                                          <  1:5538919/93‑1 (MQ=255)
                               ccTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGa                                                          <  1:5468458/93‑1 (MQ=255)
                               ccTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGa                                                          <  1:2105110/93‑1 (MQ=255)
                               ccTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGa                                                          <  1:6106251/93‑1 (MQ=255)
                                cTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGAc                                                         <  1:6106090/93‑1 (MQ=255)
                                 ttttttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACa                                                        <  2:2111754/93‑1 (MQ=255)
                                  tttttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACaa                                                       >  1:4661062/1‑93 (MQ=255)
                                    tttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAAtt                                                     <  2:4955625/93‑1 (MQ=255)
                                    tttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAAtt                                                     <  1:115291/93‑1 (MQ=255)
                                     ttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATtc                                                    >  1:5213216/1‑93 (MQ=255)
                                     ttCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATtc                                                    >  1:2633268/1‑93 (MQ=255)
                                        aCGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATtcatc                                                 >  2:4441049/1‑93 (MQ=255)
                                         cGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATtcatca                                                <  2:4608214/93‑1 (MQ=255)
                                            cATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagtt                                             >  1:1366228/1‑93 (MQ=255)
                                              tCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttca                                           >  2:3690915/1‑93 (MQ=255)
                                               ccAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttcag                                          <  2:204959/93‑1 (MQ=255)
                                               ccAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttcag                                          >  2:6093983/1‑93 (MQ=255)
                                                cAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttcagt                                         <  2:651390/93‑1 (MQ=255)
                                                cAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttcagt                                         >  1:4389363/1‑93 (MQ=255)
                                                cAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCAtcagttcaga                                         >  2:4260656/1‑92 (MQ=255)
                                                 aGGGGTGACCGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTa                                        >  2:6159792/1‑93 (MQ=255)
                                                 aGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTa                                        <  2:3409722/93‑1 (MQ=255)
                                                 aGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTa                                        >  2:4345501/1‑93 (MQ=255)
                                                 aGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTa                                        <  2:5553361/93‑1 (MQ=255)
                                                 aGGGGTGAACGTGGACAGATATCTTTGCCTGTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTa                                        <  2:3074840/93‑1 (MQ=255)
                                                  ggggTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCCGTTCAGTAc                                       >  2:3633440/1‑93 (MQ=255)
                                                  ggggTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTAc                                       >  2:2240334/1‑93 (MQ=255)
                                                  ggggTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTAc                                       <  2:5727639/93‑1 (MQ=255)
                                                  ggggTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTAc                                       >  2:2522483/1‑93 (MQ=255)
                                                  ggggTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTAc                                       >  2:5065317/1‑93 (MQ=255)
                                                      tGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTcc                                   >  2:521646/1‑93 (MQ=255)
                                                      tGAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTcc                                   <  2:3940322/93‑1 (MQ=255)
                                                       gAACGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCg                                  >  1:4232297/1‑93 (MQ=255)
                                                        aaCGTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCgg                                 <  1:5926778/93‑1 (MQ=255)
                                                           gTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAAc                              <  1:2914135/93‑1 (MQ=255)
                                                           gTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAAc                              <  2:5679877/93‑1 (MQ=255)
                                                           gTGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAAc                              <  2:1494504/93‑1 (MQ=255)
                                                            tGGAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAAcc                             >  2:2867486/1‑93 (MQ=255)
                                                             ggAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCg                            >  2:2640494/1‑93 (MQ=255)
                                                             ggAGAGATATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCg                            >  1:5121464/1‑93 (MQ=255)
                                                              gagagaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGa                           >  2:1332425/1‑93 (MQ=255)
                                                               agagaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGAc                          >  2:1053748/1‑93 (MQ=255)
                                                                gagaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGAcc                         <  1:117473/93‑1 (MQ=255)
                                                                 agaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCa                        >  1:799082/1‑93 (MQ=255)
                                                                 agaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCa                        <  1:924301/93‑1 (MQ=255)
                                                                  gaTATCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAg                       >  1:2385202/1‑93 (MQ=255)
                                                                    tatCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTc                     >  2:4059748/1‑93 (MQ=255)
                                                                    tatCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTc                     >  1:1088425/1‑93 (MQ=255)
                                                                     atCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTcc                    <  2:3794362/93‑1 (MQ=255)
                                                                     atCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTcc                    <  1:3688145/93‑1 (MQ=255)
                                                                     atCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTcc                    >  1:4330418/1‑93 (MQ=255)
                                                                     atCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGACAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTcc                    >  2:2909877/1‑93 (MQ=255)
                                                                      tCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCg                   >  2:1946441/1‑93 (MQ=255)
                                                                      tCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCg                   >  1:2548743/1‑93 (MQ=255)
                                                                      tCTTTGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCg                   <  1:6191723/93‑1 (MQ=255)
                                                                       cTTTGCCAGTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCgg                  <  1:698507/93‑1 (MQ=255)
                                                                        tttGCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGc                 >  1:5063778/1‑93 (MQ=255)
                                                                           gCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCaaa              >  1:1000050/1‑93 (MQ=255)
                                                                           gCCATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCaaa              >  1:1943288/1‑93 (MQ=255)
                                                                            ccATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAg             >  1:2245050/1‑93 (MQ=255)
                                                                            ccATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAg             >  1:5777353/1‑93 (MQ=255)
                                                                             cATTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGc            <  2:4877737/93‑1 (MQ=255)
                                                                              aTTAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGcc           >  1:4676748/1‑93 (MQ=255)
                                                                               ttAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCt          <  2:799893/93‑1 (MQ=255)
                                                                                tAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTa         <  2:2712232/93‑1 (MQ=255)
                                                                                tAAGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTa         <  2:3147813/93‑1 (MQ=255)
                                                                                 aaGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTaa        <  2:5910588/93‑1 (MQ=255)
                                                                                  aGACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAat       >  2:5976773/1‑93 (MQ=255)
                                                                                   gACGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAata      <  1:1893326/93‑1 (MQ=255)
                                                                                   aaCGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAata      <  1:216347/92‑1 (MQ=255)
                                                                                    aCGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAatat     <  2:1880165/93‑1 (MQ=255)
                                                                                    aCGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAatat     <  2:3552090/93‑1 (MQ=255)
                                                                                     cGGATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATAtt    <  2:1307735/93‑1 (MQ=255)
                                                                                       gATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTtc  >  2:5274812/1‑93 (MQ=255)
                                                                                       gATCTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTtc  <  2:4456261/93‑1 (MQ=255)
                                                                                          |                                                                                         
ATCCCGGCGGCTTTCAGTGATGTAAGCCATCCCTTTTTTCACGGCATCCAGGGGTGAACGTGGAGAGATATCTTTGCCATTAAGACGGATTTCTCCGCCAGCGCGTTTATCCACGCCAAACAGACAATTCATCAGTTCAGTACGTCCGGAACCGACCAGTCCGGCAAAGCCTAATATTTC  >  NC_000913/4307513‑4307692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: