BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,348,017	C→T	A408A (GCG→GCA)	yjdH ←	putative 2‑component sensor protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,348,017	0	C	T	100.0%	881.1 / NA	237	A408A (GCG→GCA)	yjdH	putative 2‑component sensor protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (119/118); total (119/118)

Only 100 of 252 total aligned reads displayed.

CGTGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTCGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTATT  >  NC_000913/4347927‑4348106

  tGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTtgcgg                                                                                       >  2:4138866/1‑92 (MQ=255)

  tGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTtgcgc                                                                                       >  2:724320/1‑93 (MQ=255)

  tGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTtgcgc                                                                                       >  1:5653022/1‑93 (MQ=255)

        tCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTaa                                                                                 >  1:2070775/1‑93 (MQ=255)

           gcgtcgcgtcGAGGTCATCACTGCCGCTGTCTGGCGGCTGGCTTAAACTGCTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAAGCt                                                                              <  2:1032944/93‑1 (MQ=255)

           gCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCt                                                                              <  1:530649/93‑1 (MQ=255)

              tCGCGACCTGGTCCTGACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGc                                                                           <  2:6133411/93‑1 (MQ=255)

              tCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGc                                                                           <  1:1372623/93‑1 (MQ=255)

                gcgACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTg                                                                         >  1:2961487/1‑93 (MQ=255)

                gcgACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTg                                                                         >  1:3865532/1‑93 (MQ=255)

                gcgACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTg                                                                         <  2:4855409/93‑1 (MQ=255)

                  gACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGAt                                                                       >  2:601578/1‑93 (MQ=255)

                  gACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGAt                                                                       <  2:1122343/93‑1 (MQ=255)

                   aCCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGAtt                                                                      >  1:450829/1‑93 (MQ=255)

                     cTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaa                                                                    >  2:5785286/1‑93 (MQ=255)

                     cTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaa                                                                    <  2:2349964/93‑1 (MQ=255)

                      tGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaaa                                                                   >  2:217008/1‑93 (MQ=255)

                      tGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaaa                                                                   >  1:1041403/1‑93 (MQ=255)

                       ggTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaaaa                                                                  <  1:693225/93‑1 (MQ=255)

                        gTCCTCACTGCCGCTGTCTGGCGCCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGTTTAATCTTGCTGATTaaaaa                                                                 <  2:4056932/93‑1 (MQ=255)

                        gTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTaaaaa                                                                 <  1:2523197/93‑1 (MQ=255)

                           cTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAAcc                                                              <  1:6016294/93‑1 (MQ=255)

                           cTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAAcc                                                              >  1:4828873/1‑93 (MQ=255)

                            tCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCa                                                             <  2:2562453/93‑1 (MQ=255)

                            tCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCa                                                             >  2:3031855/1‑93 (MQ=255)

                            tCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCa                                                             <  2:4367291/93‑1 (MQ=255)

                            tCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCa                                                             <  2:635526/93‑1 (MQ=255)

                             cACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAg                                                            <  2:340728/93‑1 (MQ=255)

                             cACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAg                                                            >  2:3771756/1‑93 (MQ=255)

                             cACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAg                                                            <  2:4453214/93‑1 (MQ=255)

                             cACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAg                                                            <  1:4975063/93‑1 (MQ=255)

                             cACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAg                                                            <  2:809082/93‑1 (MQ=255)

                             cACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAg                                                            <  1:4279549/93‑1 (MQ=255)

                             cACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAg                                                            <  1:2712349/93‑1 (MQ=255)

                              aCTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGc                                                           <  1:4637645/93‑1 (MQ=255)

                              aCTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGc                                                           <  1:4074086/93‑1 (MQ=255)

                              aCTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGc                                                           <  1:444710/93‑1 (MQ=255)

                               cTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCg                                                          >  2:1296412/1‑93 (MQ=255)

                               cTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCg                                                          >  2:4307119/1‑93 (MQ=255)

                               cTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCg                                                          <  1:5526139/93‑1 (MQ=255)

                               cTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCg                                                          >  2:3448558/1‑93 (MQ=255)

                                tGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGa                                                         >  1:5716774/1‑93 (MQ=255)

                                tGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGa                                                         <  1:630930/93‑1 (MQ=255)

                                tGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGa                                                         >  2:4633419/1‑93 (MQ=255)

                                 gCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGAt                                                        >  1:1841456/1‑93 (MQ=255)

                                 gCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGAt                                                        >  1:3563998/1‑93 (MQ=255)

                                  ccGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATa                                                       <  1:2406225/93‑1 (MQ=255)

                                    gCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAAc                                                     >  2:3110284/1‑93 (MQ=255)

                                    gCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAAc                                                     >  2:1315512/1‑93 (MQ=255)

                                     cTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAAcc                                                    >  1:6183802/1‑93 (MQ=255)

                                      tGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCg                                                   <  1:3993770/93‑1 (MQ=255)

                                       gTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCgg                                                  >  2:548994/1‑93 (MQ=255)

                                       gTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCgg                                                  >  1:4016404/1‑93 (MQ=255)

                                          tGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGgaga                                               <  1:4653470/93‑1 (MQ=255)

                                              aGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTg                                           >  1:1731778/1‑93 (MQ=255)

                                               gCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGa                                          >  2:5653195/1‑93 (MQ=255)

                                               gCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGa                                          <  1:5233694/93‑1 (MQ=255)

                                                cTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGAt                                         <  1:2574451/93‑1 (MQ=255)

                                                 tGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATc                                        <  2:2495939/93‑1 (MQ=255)

                                                   gCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCtt                                      <  1:3721037/93‑1 (MQ=255)

                                                     tttCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTAc                                    <  2:4521920/93‑1 (MQ=255)

                                                     tttCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTAc                                    <  1:5218248/93‑1 (MQ=255)

                                                     tttCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTAc                                    <  2:5838161/93‑1 (MQ=255)

                                                      ttCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTAcc                                   >  2:239932/1‑93 (MQ=255)

                                                       tCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTAccc                                  >  2:3382958/1‑93 (MQ=255)

                                                         aCTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCcag                                >  2:4252723/1‑93 (MQ=255)

                                                          cTGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCcagc                               >  1:2778274/1‑93 (MQ=255)

                                                           tGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCcagca                              >  2:5280615/1‑93 (MQ=255)

                                                           tGTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCcagca                              >  1:2014353/1‑93 (MQ=255)

                                                            gTTTAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCcagcag                             >  2:2276202/1‑93 (MQ=255)

                                                             tttAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCaga                            >  1:5804577/1‑93 (MQ=255)

                                                             tttAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCaga                            >  1:327787/1‑93 (MQ=255)

                                                             tttAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCaga                            <  2:173428/93‑1 (MQ=255)

                                                             tttAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCaga                            <  1:1488316/93‑1 (MQ=255)

                                                              ttAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCagag                           <  2:517261/93‑1 (MQ=255)

                                                               tAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCagaga                          <  1:3152449/93‑1 (MQ=255)

                                                               tAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCagaga                          <  1:2227219/93‑1 (MQ=255)

                                                               tAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCagaga                          <  2:1442620/93‑1 (MQ=255)

                                                               tAAAATCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGAGTTGATCTTACCCAGCagaga                          <  2:3587666/93‑1 (MQ=255)

                                                                 agaTCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAACCCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGc                        <  1:6052277/91‑1 (MQ=255)

                                                                  aaTCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGcc                       <  2:3189224/93‑1 (MQ=255)

                                                                   aTCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCa                      <  2:4716952/93‑1 (MQ=255)

                                                                    tCAGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCaa                     <  2:5935457/93‑1 (MQ=255)

                                                                      aGCGTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAAtc                   >  2:1953478/1‑93 (MQ=255)

                                                                       gCGTATGGCCTAAATCGGTTGCGCGGCTAATCTTGCTGATTAAAAAACGAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAAtct                  >  2:5919093/1‑93 (MQ=255)

                                                                         gTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATctct                >  1:4241394/1‑93 (MQ=255)

                                                                         gTATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATctct                <  1:180121/93‑1 (MQ=255)

                                                                          tATGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCtt               <  1:115554/93‑1 (MQ=255)

                                                                           aTGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTc              >  2:2846515/1‑93 (MQ=255)

                                                                           aTGGCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTc              >  2:1412102/1‑93 (MQ=255)

                                                                             ggCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCt            <  1:2872330/93‑1 (MQ=255)

                                                                              gCCTAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTg           >  1:867869/1‑93 (MQ=255)

                                                                                 tAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATa        >  1:1269125/1‑93 (MQ=255)

                                                                                 tAAATCGGTTGCGCGGTTAATCTTGCTGATTAAAAAAACAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATa        >  1:2141421/1‑93 (MQ=255)

                                                                                   aaTCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGt      >  2:5563982/1‑93 (MQ=255)

                                                                                    aTCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGtt     >  1:6209428/1‑93 (MQ=255)

                                                                                    aTCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGtt     <  1:5782615/93‑1 (MQ=255)

                                                                                     tCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTa    >  2:5731556/1‑93 (MQ=255)

                                                                                     tCGGTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTa    >  1:3481113/1‑93 (MQ=255)

                                                                                       ggTTGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTAtt  <  1:130638/93‑1 (MQ=255)

CGTGGTAATCAGCGTCGCGACCTGGTCCTCACTGCCGCTGTCTGGCAGCTGGCTTTCACTGTTTAAAATCAGCGTATGGCCTAAATCGGTCGCGCGGTTAATCTTGCTGATTAAAAAACCAGCGATAACCGGAGATTTGATCTTACCCAGCAGAGAGCCAATCTCTTCCTGATAGTTATT  >  NC_000913/4347927‑4348106

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`