BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,369,183	A→G	Q194R (CAG→CGG)	mopA →	GroEL

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,369,183	0	A	G	100.0%	782.9 / NA	243	Q194R (CAG→CGG)	mopA	GroEL
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (116/127); total (116/127)

Only 100 of 255 total aligned reads displayed.

AAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCT  >  NC_000913/4369093‑4369271

aaGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGt                                                                                        <  1:4866959/93‑1 (MQ=255)

aaGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGt                                                                                        >  1:1631100/1‑93 (MQ=255)

aaGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGt                                                                                        >  1:2064118/1‑93 (MQ=255)

  gCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTc                                                                                      <  1:1268780/93‑1 (MQ=255)

  gCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTc                                                                                      <  1:4952789/93‑1 (MQ=255)

  gCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTc                                                                                      >  2:3798199/1‑93 (MQ=255)

   cGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCg                                                                                     >  2:5010330/1‑93 (MQ=255)

    gATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGa                                                                                    >  2:6061465/1‑93 (MQ=255)

      tGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGAcc                                                                                  <  1:3396950/93‑1 (MQ=255)

       ggACAAAGTCGGTAAAGAGGGCGTCATCACCGTTGAGGACGGTACCGGTGTGAAGGACGACCTGGCCGTGGTTGAAGCTATGCGCTTCGCCCg                                                                                 <  2:33558/93‑1 (MQ=255)

       ggACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCg                                                                                 >  1:3637306/1‑93 (MQ=255)

         aCAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTg                                                                               >  2:5596627/1‑93 (MQ=255)

         aCAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTg                                                                               <  1:2480894/93‑1 (MQ=255)

         aCAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTg                                                                               >  1:2169905/1‑93 (MQ=255)

          cAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTgg                                                                              <  1:4129260/93‑1 (MQ=255)

          cAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTgg                                                                              <  2:1867489/93‑1 (MQ=255)

           aaaGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGc                                                                             <  2:4029084/93‑1 (MQ=255)

           aaaGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGc                                                                             <  1:5776108/93‑1 (MQ=255)

            aaGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCt                                                                            <  1:1022607/93‑1 (MQ=255)

            aaGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCt                                                                            >  2:1431154/1‑93 (MQ=255)

            aaGTCGGTAAAGAAGGCGTTATCACCGGTGAAGACGGTACCGGGCTGCAGGACGAACTGGACGTGGTTGAAGGGATGCGGTTCGACCGTGGCt                                                                            >  2:4278141/1‑93 (MQ=255)

               tCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAcc                                                                         <  1:26003/93‑1 (MQ=255)

               tCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAcc                                                                         <  2:1196562/93‑1 (MQ=255)

                cGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCt                                                                        <  2:848493/93‑1 (MQ=255)

                  gTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGt                                                                      >  2:1334338/1‑93 (MQ=255)

                      agaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTcc                                                                  >  2:1570184/1‑93 (MQ=255)

                      agaagGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTcc                                                                  >  1:1675567/1‑93 (MQ=255)

                      agaagGCGTTAGCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTcc                                                                  <  1:1356649/93‑1 (MQ=255)

                         agGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTa                                                               >  1:2205870/1‑93 (MQ=255)

                           gCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACt                                                             <  1:584282/93‑1 (MQ=255)

                           gCGTTATCACCGTTGAAGACGGTACCGGGCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACt                                                             >  1:3713645/1‑93 (MQ=255)

                             gTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtc                                                           <  1:2075000/93‑1 (MQ=255)

                             gTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGCCTCCTTACTtc                                                           >  1:6132599/1‑93 (MQ=255)

                              ttATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtca                                                          <  1:5289783/93‑1 (MQ=255)

                              ttATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtca                                                          >  2:2262389/1‑93 (MQ=255)

                                 tCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcatca                                                       >  1:325859/1‑93 (MQ=255)

                                 tCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcatca                                                       >  2:256429/1‑93 (MQ=255)

                                 tCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTAGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcatca                                                       >  1:1077795/1‑93 (MQ=255)

                                 tCACCGTTGAAGACGGTACCGGTCTGCACGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTtcatca                                                       >  2:1006653/1‑93 (MQ=255)

                                     cGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATcaacaa                                                   <  1:1289259/93‑1 (MQ=255)

                                      gTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAg                                                  >  1:3077202/1‑93 (MQ=255)

                                       ttGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGc                                                 >  2:2947051/1‑93 (MQ=255)

                                         gAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGGAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCg                                               >  2:526604/1‑93 (MQ=255)

                                         gAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGCCCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCg                                               <  1:2866729/93‑1 (MQ=255)

                                         gAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCg                                               >  2:761253/1‑93 (MQ=255)

                                          aaGTCGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGTCCGTGTCTACCTGTCTCCTTACTTCATCAACAAGCCgg                                              <  2:2533201/93‑1 (MQ=255)

                                          aaGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCgg                                              <  1:5456748/93‑1 (MQ=255)

                                             aCGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGaaa                                           >  1:451727/1‑93 (MQ=255)

                                              cGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAAc                                          <  1:4689184/93‑1 (MQ=255)

                                               ggTGCCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGGGGCTACCTGTCTCCGTACTTCATCAACAAGCCGGAAACt                                         <  2:2974150/93‑1 (MQ=255)

                                               ggTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACt                                         >  2:3979012/1‑93 (MQ=255)

                                               ggTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACt                                         >  1:3003589/1‑93 (MQ=255)

                                                gTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTGTCCTTACTTCATCAACAAGCCGGAAACTg                                        >  2:6191936/1‑93 (MQ=255)

                                                gTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCCACAAGCCGGCAACTg                                        >  1:187220/1‑93 (MQ=255)

                                                 tACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTgg                                       <  1:5634072/93‑1 (MQ=255)

                                                 tACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTgg                                       >  2:4157237/1‑93 (MQ=255)

                                                 tACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTgg                                       <  1:4313296/93‑1 (MQ=255)

                                                 tACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTgg                                       <  2:2805604/93‑1 (MQ=255)

                                                  aCCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGgc                                      <  1:5180160/93‑1 (MQ=255)

                                                   ccGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGgcg                                     >  1:6149963/1‑93 (MQ=255)

                                                   ccGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGgcg                                     >  1:4460949/1‑93 (MQ=255)

                                                     ggTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCa                                   <  2:4675546/93‑1 (MQ=255)

                                                     ggTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCa                                   >  2:1298040/1‑93 (MQ=255)

                                                      gTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTAACTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAg                                  >  2:4580039/1‑93 (MQ=255)

                                                      gTCTGCAGGACGAACTGGACGTGGTTGAAGGCATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAg                                  >  2:342779/1‑93 (MQ=255)

                                                       tCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGt                                 <  2:4505886/93‑1 (MQ=255)

                                                         tGCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAg                               >  2:1768454/1‑93 (MQ=255)

                                                         tGCAGGACGAACTGGACGTGGTTGAAGGAATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCTACAATCCGGCAACTGGCGCAGTAg                               >  2:2877377/1‑93 (MQ=255)

                                                          gCAGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGa                              >  2:3226829/1‑93 (MQ=255)

                                                            aGGGCGAACTGGACGTGGTTGAAGGTGTGCTGTTCGGCCGTGGCTACCTTTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAc                            <  1:589008/93‑1 (MQ=255)

                                                            aGGACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTGCCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAAc                            <  1:5794251/93‑1 (MQ=255)

                                                             ggACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACt                           >  2:1117543/1‑93 (MQ=255)

                                                              gACGAACTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTg                          <  2:1656775/93‑1 (MQ=255)

                                                                  aaCTGGACGTTGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGaaa                      <  2:5710083/93‑1 (MQ=255)

                                                                   aCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAg                     >  1:566652/1‑93 (MQ=255)

                                                                   aCTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAg                     >  1:664317/1‑93 (MQ=255)

                                                                    cTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGc                    <  1:4658873/93‑1 (MQ=255)

                                                                    cTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGc                    >  1:2312159/1‑93 (MQ=255)

                                                                    cTGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGc                    <  2:5316663/93‑1 (MQ=255)

                                                                     tGGACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGcc                   >  2:1920955/1‑93 (MQ=255)

                                                                      ggACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGccc                  >  2:3632294/1‑93 (MQ=255)

                                                                      ggACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGccc                  <  1:5484603/93‑1 (MQ=255)

                                                                      ggACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGccc                  <  1:4380247/93‑1 (MQ=255)

                                                                      ggACGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGccc                  >  1:5522458/1‑93 (MQ=255)

                                                                        aCGTAGTGGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGt                <  1:2661465/93‑1 (MQ=255)

                                                                         cGTGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGtt               <  1:856429/93‑1 (MQ=255)

                                                                           tGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCa             >  1:1593423/1‑93 (MQ=255)

                                                                           tGGTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCa             <  2:3191656/93‑1 (MQ=255)

                                                                           gggTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTCCTTCATCACCAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCa             <  2:4799030/92‑1 (MQ=255)

                                                                             gTTGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATc           <  1:1476977/93‑1 (MQ=255)

                                                                              ttGAAGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATcc          <  2:2662345/93‑1 (MQ=255)

                                                                                  aGGTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgct      >  1:5094342/1‑93 (MQ=255)

                                                                                  aGGTATGCGGTTCGACCGTGGCTACCCGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgct      <  2:5094566/93‑1 (MQ=255)

                                                                                   ggTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgctg     >  1:1715895/1‑93 (MQ=255)

                                                                                   ggTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgctg     <  2:1736187/93‑1 (MQ=255)

                                                                                   ggTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCctgctg     <  2:3879897/93‑1 (MQ=255)

                                                                                    gTATGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctgg    <  2:1987684/93‑1 (MQ=255)

                                                                                      aTGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggct  >  2:4914557/1‑93 (MQ=255)

                                                                                      aTGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggct  <  1:3874045/93‑1 (MQ=255)

                                                                                      aTGCGGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTgctggct  <  2:5659903/93‑1 (MQ=255)

AAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCT  >  NC_000913/4369093‑4369271

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`