BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,392,958	G→A	G439S (GGC→AGC)	yjeF →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,392,958	0	G	A	100.0%	1093.1 / NA	290	G439S (GGC→AGC)	yjeF	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (0/0); new base A (144/146); total (144/146)

Only 100 of 301 total aligned reads displayed.

GCGGTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCGGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCTGTGTCGCG  >  NC_000913/4392868‑4393047

 cGGTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGgcagca                                                                                        <  1:4886557/93‑1 (MQ=255)

 cGGTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGgcagca                                                                                        <  2:4805629/93‑1 (MQ=255)

  ggTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCAt                                                                                       >  2:4745666/1‑93 (MQ=255)

   gTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATg                                                                                      <  1:131969/93‑1 (MQ=255)

   gTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATg                                                                                      <  1:794716/93‑1 (MQ=255)

     gCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATggg                                                                                    >  1:4218659/1‑93 (MQ=255)

      cTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGc                                                                                   <  1:3652948/93‑1 (MQ=255)

      cTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGc                                                                                   >  2:2691541/1‑93 (MQ=255)

       tGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCg                                                                                  >  2:1939224/1‑93 (MQ=255)

        gAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGa                                                                                 >  2:5738208/1‑93 (MQ=255)

        gAAAGGTGCCGGAACCGTCGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGa                                                                                 <  2:3882800/93‑1 (MQ=255)

          aaGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGAtg                                                                               <  1:1627372/93‑1 (MQ=255)

           aGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGAtgt                                                                              <  1:2153712/93‑1 (MQ=255)

           aGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGAtgt                                                                              >  1:3230219/1‑93 (MQ=255)

            ggTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGAtgtg                                                                             >  1:3082104/1‑93 (MQ=255)

               gCCGGAGCCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGctc                                                                          <  2:1490583/93‑1 (MQ=255)

               gCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGctc                                                                          <  1:1177593/93‑1 (MQ=255)

                ccGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGctct                                                                         >  2:2583529/1‑93 (MQ=255)

                 cGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGctctc                                                                        >  2:3454128/1‑93 (MQ=255)

                 cGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGctctc                                                                        <  1:4347016/93‑1 (MQ=255)

                  ggAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGctctct                                                                       <  1:6211997/93‑1 (MQ=255)

                    aaCCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTgg                                                                     >  2:2828758/1‑93 (MQ=255)

                     aCCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGt                                                                    <  2:6203999/93‑1 (MQ=255)

                     aCCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGt                                                                    >  2:4165935/1‑93 (MQ=255)

                     aCCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGt                                                                    <  1:45637/93‑1 (MQ=255)

                     aCCGTGGTCGCCGCCCATCCTAACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGt                                                                    >  2:4010812/1‑93 (MQ=255)

                      ccGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGta                                                                   <  1:2907547/93‑1 (MQ=255)

                      ccGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGta                                                                   >  1:5157082/1‑93 (MQ=255)

                        gTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGtatt                                                                 >  2:6256742/1‑93 (MQ=255)

                        gTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGtatt                                                                 >  2:5912836/1‑93 (MQ=255)

                         tGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGtatta                                                                >  2:157303/1‑93 (MQ=255)

                         tGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGtatta                                                                <  2:5142554/93‑1 (MQ=255)

                          ggTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGtattat                                                               <  2:2049731/93‑1 (MQ=255)

                            tCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTg                                                             >  2:3560880/1‑93 (MQ=255)

                            tCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTg                                                             >  1:5621220/1‑93 (MQ=255)

                              gccgccCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGgc                                                           >  1:3892046/1‑93 (MQ=255)

                              gccgccCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGgc                                                           <  1:3471352/93‑1 (MQ=255)

                               ccgccCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGgcg                                                          <  1:5931026/93‑1 (MQ=255)

                                cgccCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGgcgc                                                         <  2:5463579/93‑1 (MQ=255)

                                 gccCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCa                                                        >  1:4491094/1‑93 (MQ=255)

                                 gccCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCa                                                        >  1:19704/1‑93 (MQ=255)

                                 gccCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCa                                                        >  1:2813958/1‑93 (MQ=255)

                                  cccATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCAt                                                       >  2:2261195/1‑93 (MQ=255)

                                  cccATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCAt                                                       >  2:4400779/1‑93 (MQ=255)

                                    cATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTg                                                     >  1:652944/1‑93 (MQ=255)

                                    cATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTg                                                     >  1:572285/1‑93 (MQ=255)

                                    cATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTg                                                     >  2:2952169/1‑93 (MQ=255)

                                    cATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTg                                                     >  2:2439244/1‑93 (MQ=255)

                                    cATCCTGAAGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTg                                                     >  2:3216927/1‑93 (MQ=255)

                                     aTCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGc                                                    >  2:567357/1‑93 (MQ=255)

                                      tCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCt                                                   >  1:683997/1‑93 (MQ=255)

                                      tCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCt                                                   <  2:1749329/93‑1 (MQ=255)

                                       ccTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCtt                                                  <  2:4331842/93‑1 (MQ=255)

                                        cTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTg                                                 >  1:2038005/1‑93 (MQ=255)

                                        cTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTg                                                 >  2:4602001/1‑93 (MQ=255)

                                        cTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTg                                                 >  1:4363612/1‑93 (MQ=255)

                                         tGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTgg                                                >  2:88969/1‑93 (MQ=255)

                                         tGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTgg                                                <  1:4275529/93‑1 (MQ=255)

                                         tGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTgg                                                <  2:1612520/93‑1 (MQ=255)

                                           aCGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGc                                              <  2:4898645/93‑1 (MQ=255)

                                             gCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCaa                                            >  1:1918539/1‑93 (MQ=255)

                                              cTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCaaa                                           >  2:3727266/1‑93 (MQ=255)

                                               tttAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCaaaa                                          >  2:3047388/1‑93 (MQ=255)

                                                ttAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCaaaaa                                         <  1:875215/93‑1 (MQ=255)

                                                 tAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAAc                                        <  1:5349078/93‑1 (MQ=255)

                                                    gCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGt                                     <  2:778124/93‑1 (MQ=255)

                                                     cATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTc                                    <  2:4670487/93‑1 (MQ=255)

                                                      attattGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCg                                   >  2:1805124/1‑93 (MQ=255)

                                                      attattGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCg                                   >  1:2999478/1‑93 (MQ=255)

                                                       ttattGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGCGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGc                                  >  1:6028169/1‑93 (MQ=255)

                                                         attGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCg                                >  1:1150238/1‑93 (MQ=255)

                                                         attGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCg                                >  2:2347092/1‑93 (MQ=255)

                                                          ttGATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGt                               <  2:5065706/93‑1 (MQ=255)

                                                            gATGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTat                             >  2:4862203/1‑93 (MQ=255)

                                                              tGCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTatga                           >  2:3654216/1‑93 (MQ=255)

                                                               gCCGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTatgat                          <  1:2722371/93‑1 (MQ=255)

                                                                 cGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGc                        >  1:1007595/1‑93 (MQ=255)

                                                                 cGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGc                        <  1:2346799/93‑1 (MQ=255)

                                                                 cGGAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGc                        <  1:967526/93‑1 (MQ=255)

                                                                  ggAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCa                       <  2:4357122/93‑1 (MQ=255)

                                                                  ggAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCa                       >  2:703887/1‑93 (MQ=255)

                                                                  ggAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCa                       <  1:5003481/93‑1 (MQ=255)

                                                                   gAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAg                      >  2:3501364/1‑93 (MQ=255)

                                                                   gAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAg                      >  2:1889833/1‑93 (MQ=255)

                                                                   gAAATGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAg                      >  1:2612817/1‑93 (MQ=255)

                                                                     aaTGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGcc                    <  1:3979452/93‑1 (MQ=255)

                                                                      aTGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCt                   <  2:3151263/93‑1 (MQ=255)

                                                                      aTGCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCt                   >  2:1390973/1‑93 (MQ=255)

                                                                        gCAGGCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCtgt                 >  2:1075678/1‑93 (MQ=255)

                                                                           ggCATGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCa              <  1:1806741/93‑1 (MQ=255)

                                                                              aTGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGc           >  1:4728540/1‑93 (MQ=255)

                                                                              aTGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGc           >  1:5207837/1‑93 (MQ=255)

                                                                              aTGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGc           >  1:1475320/1‑93 (MQ=255)

                                                                              aTGGCGAGAGGCAGCATGGCCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGc           >  2:6113480/1‑93 (MQ=255)

                                                                               tGGCGAGCGGCAGCATTGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCt          >  1:2476965/1‑93 (MQ=255)

                                                                               tGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCt          >  1:4660726/1‑93 (MQ=255)

                                                                               tGGCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCt          >  2:1233951/1‑93 (MQ=255)

                                                                                 gCGAGCGGCAGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCtgt        <  2:278025/93‑1 (MQ=255)

                                                                                     gcggcaGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCTGTGTcg    >  2:5237444/1‑93 (MQ=255)

                                                                                      cggcagCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCTGTGTcgc   <  2:4538601/93‑1 (MQ=255)

GCGGTGCTGAAAGGTGCCGGAACCGTGGTCGCCGCCCATCCTGACGCTTTAGGCATTATTGATGCCGGAAATGCAGGCATGGCGAGCGGCGGCATGGGCGATGTGCTCTCTGGTATTATTGGCGCATTGCTTGGGCAAAAACTGTCGCCGTATGATGCAGCCTGTGCAGGCTGTGTCGCG  >  NC_000913/4392868‑4393047

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`