BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,428,092	A→G	G217G (GGA→GGG)	cycA →	transport of D‑alanine, D‑serine, and glycine

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,428,092	0	A	G	100.0%	650.5 / NA	200	G217G (GGA→GGG)	cycA	transport of D‑alanine, D‑serine, and glycine
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (99/101); total (99/101)

Only 100 of 209 total aligned reads displayed.

AGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGATTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCACG  >  NC_000913/4428004‑4428181

aGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTcc                                                                                       >  2:1150914/1‑93 (MQ=255)

 gTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCa                                                                                      <  1:3891431/93‑1 (MQ=255)

 gTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCa                                                                                      <  2:3593140/93‑1 (MQ=255)

 gTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCa                                                                                      >  1:1527219/1‑93 (MQ=255)

  tCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGGCGGGTTGCAg                                                                                     >  1:1158376/1‑93 (MQ=255)

  tCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAg                                                                                     <  2:2892398/93‑1 (MQ=255)

    aCCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGAt                                                                                   <  1:5227670/93‑1 (MQ=255)

      cGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAg                                                                                 <  2:2666108/93‑1 (MQ=255)

        aCTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCg                                                                               >  1:2617510/1‑93 (MQ=255)

         cTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCgg                                                                              <  1:2262433/93‑1 (MQ=255)

         cTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCgg                                                                              >  1:318994/1‑93 (MQ=255)

          tGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGt                                                                             >  2:1224777/1‑93 (MQ=255)

          tGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGt                                                                             >  2:2223845/1‑93 (MQ=255)

           ggTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGtt                                                                            <  1:6274127/93‑1 (MQ=255)

           ggTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGtt                                                                            <  1:2925723/93‑1 (MQ=255)

             tgtgGAAGCGTCATTCGCGCATGTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGtttt                                                                          <  1:3278745/93‑1 (MQ=255)

               tgGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCg                                                                        <  2:3448856/93‑1 (MQ=255)

                ggAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGc                                                                       >  1:3360587/1‑93 (MQ=255)

                ggAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGc                                                                       <  2:1810262/93‑1 (MQ=255)

                 gAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCt                                                                      >  2:5829275/1‑93 (MQ=255)

                 gAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCt                                                                      <  1:2975125/93‑1 (MQ=255)

                     cGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCg                                                                  <  1:4364740/93‑1 (MQ=255)

                      gTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGt                                                                 >  1:808083/1‑93 (MQ=255)

                       tCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTg                                                                <  1:1349272/93‑1 (MQ=255)

                       tCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTg                                                                >  2:5239156/1‑93 (MQ=255)

                           tCGCGCTTTTGTGGAATGACGGTGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGa                                                            <  2:5146550/93‑1 (MQ=255)

                            cgcgCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGAt                                                           <  1:5602865/93‑1 (MQ=255)

                             gcgcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGAtt                                                          <  1:6058194/93‑1 (MQ=255)

                             gcgcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGAtt                                                          >  1:3426062/1‑93 (MQ=255)

                              cgcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTg                                                         >  1:1138680/1‑93 (MQ=255)

                               gcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        <  1:3556449/93‑1 (MQ=255)

                               gcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        <  2:2112487/93‑1 (MQ=255)

                               gcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        <  1:1416868/93‑1 (MQ=255)

                               gcATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGa                                                        >  1:517300/1‑93 (MQ=255)

                                cATTTGTGGAATGACGGCGGCTGGTTCCCGATAGGTTTAAGTGGCTTCTTTGTCGGGGTCCAGATAGCGGTTTTCGCTTTCGTGGGGAGTggg                                                       >  1:2485495/1‑91 (MQ=255)

                                cATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAg                                                       <  2:1073881/93‑1 (MQ=255)

                                cATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAg                                                       >  1:241165/1‑93 (MQ=255)

                                 aTTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGATTAAGTGGCTTCTTTGCCGGGATCCAGATAGCGGTTTTCGCTCTCGTGGGGACTGAGc                                                      >  2:3373179/1‑93 (MQ=255)

                                  tttGTGGAATGACGGCGGCTGGTTGCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCt                                                     <  1:5197972/93‑1 (MQ=255)

                                  tttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCt                                                     >  2:785033/1‑93 (MQ=255)

                                  tttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCt                                                     >  1:5086651/1‑93 (MQ=255)

                                  tttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCt                                                     <  1:21500/93‑1 (MQ=255)

                                  tttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCt                                                     <  1:2169998/93‑1 (MQ=255)

                                  tttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCt                                                     >  1:4500939/1‑93 (MQ=255)

                                   ttGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTg                                                    <  1:4830336/93‑1 (MQ=255)

                                    tgtgGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTgg                                                   <  1:1362381/93‑1 (MQ=255)

                                     gtgGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggt                                                  >  1:3017635/1‑93 (MQ=255)

                                     gtgGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggt                                                  <  2:1991582/93‑1 (MQ=255)

                                      tgGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggta                                                 <  2:3120440/93‑1 (MQ=255)

                                      tgGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggta                                                 <  2:5278785/93‑1 (MQ=255)

                                      tgGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTGCGTGGGGATTGAGCTggta                                                 <  2:6104949/93‑1 (MQ=255)

                                       ggAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggtag                                                <  1:1891302/93‑1 (MQ=255)

                                          aTGGCGGCGTCTGGTGCCCGAAAGGTGTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTggtaggta                                             <  1:3079210/93‑1 (MQ=255)

                                             accgcggcTTGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaa                                          <  2:6185334/90‑1 (MQ=255)

                                             aCGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaa                                          <  1:3956118/93‑1 (MQ=255)

                                               ggcggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTacaaca                                        >  1:4885324/1‑93 (MQ=255)

                                                gcggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAg                                       >  2:1601357/1‑93 (MQ=255)

                                                 cggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGc                                      <  2:4657682/93‑1 (MQ=255)

                                                 cggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGc                                      <  2:555700/93‑1 (MQ=255)

                                                  ggcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCt                                     >  1:710979/1‑93 (MQ=255)

                                                  ggcTGGTTCCCGAAAGGGTTTAGTGGCTTCTTTTTCGGGGGGCCGATAACGGGTTTTGCGTTTGTGGGGGGTTAGGTGGGGGGTtcaacaacc                                     >  2:4234879/1‑90 (MQ=255)

                                                   gcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTg                                    >  2:3965785/1‑93 (MQ=255)

                                                   gcTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGGTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGGACAACAGCTg                                    >  2:2417295/1‑93 (MQ=255)

                                                    cTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGc                                   <  1:3296673/93‑1 (MQ=255)

                                                    cTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGc                                   <  2:5319511/93‑1 (MQ=255)

                                                     tGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGTGCTGGTAGGTACAACAGCTGCg                                  >  2:2764890/1‑93 (MQ=255)

                                                     tGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCg                                  >  2:507636/1‑93 (MQ=255)

                                                     tGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCg                                  >  1:992232/1‑93 (MQ=255)

                                                      ggTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCgg                                 <  1:1488264/93‑1 (MQ=255)

                                                        ttCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGaa                               <  1:5312952/93‑1 (MQ=255)

                                                         tCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGaaa                              >  1:276765/1‑93 (MQ=255)

                                                          cccGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAAc                             <  2:4989378/93‑1 (MQ=255)

                                                            cGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCa                           >  2:5654324/1‑93 (MQ=255)

                                                            cGAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCa                           >  2:3483551/1‑93 (MQ=255)

                                                             gAAAGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCaa                          >  2:4882640/1‑93 (MQ=255)

                                                              aaaGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCaaa                         <  2:4644033/93‑1 (MQ=255)

                                                              aaaGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCaaa                         <  2:4266996/93‑1 (MQ=255)

                                                               aaGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAg                        <  2:372133/93‑1 (MQ=255)

                                                               aaGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAg                        >  1:5835503/1‑93 (MQ=255)

                                                               aaGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAg                        >  1:6068368/1‑93 (MQ=255)

                                                               aaGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAg                        >  1:866956/1‑93 (MQ=255)

                                                                aGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGa                       >  2:4716534/1‑93 (MQ=255)

                                                                aGGTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGa                       <  2:3021831/93‑1 (MQ=255)

                                                                 ggTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGAt                      <  2:4087033/93‑1 (MQ=255)

                                                                 ggTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGAt                      >  2:1509026/1‑93 (MQ=255)

                                                                  gTTTAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATc                     <  2:684407/93‑1 (MQ=255)

                                                                    ttAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGCTTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCa                   >  2:3280041/1‑93 (MQ=255)

                                                                    ttAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCa                   >  1:1771169/1‑93 (MQ=255)

                                                                     tAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCag                  >  1:1016326/1‑93 (MQ=255)

                                                                     tAAGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCag                  >  1:4861120/1‑93 (MQ=255)

                                                                       aGTGGCTTCTTTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCagag                <  1:3950099/93‑1 (MQ=255)

                                                                            cttcttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATc           >  1:1597986/1‑93 (MQ=255)

                                                                              tcttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCAc         <  1:1650345/93‑1 (MQ=255)

                                                                               cttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACt        >  1:53609/1‑93 (MQ=255)

                                                                               cttTGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACt        <  1:4698584/93‑1 (MQ=255)

                                                                                tttGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTg       >  2:2459891/1‑93 (MQ=255)

                                                                                 ttGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGc      >  1:599631/1‑93 (MQ=255)

                                                                                  tGCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGcc     <  2:712455/93‑1 (MQ=255)

                                                                                   gCCGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCa    >  1:4200567/1‑93 (MQ=255)

                                                                                     cGGGTTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCAcg  >  1:5975957/1‑93 (MQ=255)

AGTCACCGACTGGTGTGGAAGCGTCATTCGCGCATTTGTGGAATGACGGCGGCTGGTTCCCGAAAGGTTTAAGTGGCTTCTTTGCCGGATTCCAGATAGCGGTTTTCGCTTTCGTGGGGATTGAGCTGGTAGGTACAACAGCTGCGGAAACCAAAGATCCAGAGAAATCACTGCCACG  >  NC_000913/4428004‑4428181

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 33 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`