BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,444,690	T→C	V1001A (GTA→GCA)	ytfN →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,444,690	0	T	C	100.0%	748.1 / NA	234	V1001A (GTA→GCA)	ytfN	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (115/119); total (115/119)

Only 100 of 247 total aligned reads displayed.

TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA  >  NC_000913/4444600‑4444779

tCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGcagcag                                                                                         <  2:846396/93‑1 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      >  1:3771566/1‑93 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      >  2:3869046/1‑93 (MQ=255)

   aGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCg                                                                                      <  1:4388597/93‑1 (MQ=255)

    ggCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGt                                                                                     <  2:4711015/93‑1 (MQ=255)

       tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc                                                                                  <  2:316872/93‑1 (MQ=255)

       tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc                                                                                  <  1:1774876/93‑1 (MQ=255)

       tACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGtctc                                                                                  >  2:2140492/1‑93 (MQ=255)

        acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc                                                                                 >  1:5734666/1‑93 (MQ=255)

        acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc                                                                                 >  2:5497677/1‑93 (MQ=255)

        acacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTcc                                                                                 >  1:5191711/1‑93 (MQ=255)

         cacCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCa                                                                                >  2:4154334/1‑93 (MQ=255)

          acCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAg                                                                               <  2:281110/93‑1 (MQ=255)

             aaaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGa                                                                            <  1:293362/93‑1 (MQ=255)

              aaCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAt                                                                           >  1:422143/1‑93 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          <  2:3017119/93‑1 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          >  1:1341958/1‑93 (MQ=255)

               aCCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGAtg                                                                          <  1:742681/93‑1 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      >  1:4596730/1‑93 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      >  1:2968197/1‑93 (MQ=255)

                   gTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATgtggt                                                                      >  2:4275437/1‑93 (MQ=255)

                     ttACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGa                                                                    <  1:3500174/93‑1 (MQ=255)

                      tACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGAt                                                                   <  2:4255063/93‑1 (MQ=255)

                       aCCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCCGCAGGCGTCTCCAGCGATGTGGTGATg                                                                  >  2:2304515/1‑93 (MQ=255)

                        cccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGc                                                                 >  1:2918822/1‑93 (MQ=255)

                         ccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGCGGTGATGCt                                                                >  2:6273175/1‑93 (MQ=255)

                         ccTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGAGCAGCAGGCGTCTCCAGCGATGTGGTGATGCt                                                                >  1:1217395/1‑93 (MQ=255)

                          cTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCtt                                                               <  1:2215/93‑1 (MQ=255)

                           tCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTa                                                              >  2:5607447/1‑93 (MQ=255)

                           tCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTa                                                              >  2:2250569/1‑93 (MQ=255)

                           tCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTa                                                              >  2:4848651/1‑93 (MQ=255)

                            cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa                                                             <  1:2886233/93‑1 (MQ=255)

                            cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa                                                             >  1:2665378/1‑93 (MQ=255)

                            cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa                                                             <  1:199979/93‑1 (MQ=255)

                            cGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTaa                                                             <  1:3410334/93‑1 (MQ=255)

                             gATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAAc                                                            >  2:4652167/1‑93 (MQ=255)

                               tGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGa                                                          >  2:266390/1‑93 (MQ=255)

                                  tCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATaa                                                       <  1:4944618/93‑1 (MQ=255)

                                  tCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATaa                                                       <  2:3098471/93‑1 (MQ=255)

                                    gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc                                                     <  2:2741536/93‑1 (MQ=255)

                                    gcgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAcc                                                     <  1:4477005/93‑1 (MQ=255)

                                     cgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTGACGATAACCt                                                    >  2:8953/1‑93 (MQ=255)

                                     cgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAAACt                                                    >  2:1123690/1‑93 (MQ=255)

                                     cgTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGACGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCt                                                    <  2:4496219/93‑1 (MQ=255)

                                      gTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTg                                                   >  2:3415248/1‑93 (MQ=255)

                                       tGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGTCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGc                                                  >  2:5373987/1‑93 (MQ=255)

                                       tGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGc                                                  <  2:2442238/93‑1 (MQ=255)

                                        ggATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCa                                                 <  2:631397/93‑1 (MQ=255)

                                        ggATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCa                                                 <  2:2048223/93‑1 (MQ=255)

                                         gATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCaa                                                >  1:3103852/1‑93 (MQ=255)

                                          aTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAc                                               >  2:1294451/1‑93 (MQ=255)

                                          aTGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAc                                               >  2:1850479/1‑93 (MQ=255)

                                           tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc                                              >  1:4654779/1‑93 (MQ=255)

                                           tGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAAcc                                              >  2:5055962/1‑93 (MQ=255)

                                             tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCgg                                            >  1:3559337/1‑93 (MQ=255)

                                             tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCgg                                            >  1:3296084/1‑93 (MQ=255)

                                             tCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCgg                                            >  2:5798727/1‑93 (MQ=255)

                                               ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa                                          >  1:4085062/1‑93 (MQ=255)

                                               ccTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGaa                                          <  2:1397994/93‑1 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         >  2:2575519/1‑93 (MQ=255)

                                                cTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAag                                         >  1:3523686/1‑93 (MQ=255)

                                                 ttGGGCGCGCATCGTGTTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAaga                                        <  2:1648406/93‑1 (MQ=255)

                                                 ttGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAagg                                        >  1:5507828/1‑92 (MQ=255)

                                                   gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc                                      <  1:552810/93‑1 (MQ=255)

                                                   gggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGc                                      >  2:5854039/1‑93 (MQ=255)

                                                    ggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGcc                                     <  1:1305862/93‑1 (MQ=255)

                                                    ggCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGcc                                     >  2:3816875/1‑93 (MQ=255)

                                                       gcgcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGGCGaa                                  >  2:6035180/1‑93 (MQ=255)

                                                         gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGTGCCGaaaa                                <  2:6144100/93‑1 (MQ=255)

                                                         gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaaa                                <  1:89600/93‑1 (MQ=255)

                                                         gcATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGaaaa                                <  2:3504860/93‑1 (MQ=255)

                                                          cATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc                               >  2:3465146/1‑93 (MQ=255)

                                                          cATCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAAc                               <  2:360110/93‑1 (MQ=255)

                                                            tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg                             <  2:1691166/93‑1 (MQ=255)

                                                            tCGTGGTGCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACgg                             >  1:1231393/1‑93 (MQ=255)

                                                              gtggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCg                           <  2:3384307/93‑1 (MQ=255)

                                                                ggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTc                         >  1:686651/1‑93 (MQ=255)

                                                                ggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTc                         <  1:5589329/93‑1 (MQ=255)

                                                                ggtgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTc                         <  1:4949844/93‑1 (MQ=255)

                                                                  tgCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGa                       <  1:4760843/93‑1 (MQ=255)

                                                                   gCACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAt                      >  1:5346162/1‑93 (MQ=255)

                                                                    cgcGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAtt                     <  1:106213/91‑1 (MQ=255)

                                                                    cACGATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGAtt                     <  2:3307058/93‑1 (MQ=255)

                                                                       gATCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCg                  >  2:3697421/1‑93 (MQ=255)

                                                                        aTCTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGAGTCGATTCCGa                 >  2:5339800/1‑93 (MQ=255)

                                                                          cTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAtt               >  2:1886625/1‑93 (MQ=255)

                                                                          cTGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGAtt               <  1:3941902/93‑1 (MQ=255)

                                                                           tGCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTa              >  1:2437103/1‑93 (MQ=255)

                                                                            gCCGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTaa             <  1:2756666/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCATGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           <  1:3565766/93‑1 (MQ=255)

                                                                              cGGAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACa           >  1:5682957/1‑93 (MQ=255)

                                                                                gAAAGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGt         >  2:2954525/1‑93 (MQ=255)

                                                                                 aaaGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTa        >  2:1529284/1‑93 (MQ=255)

                                                                                  aaGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTaa       <  2:4031391/93‑1 (MQ=255)

                                                                                   aGCGCAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc      <  1:6066422/93‑1 (MQ=255)

                                                                                   aGCGCAGCAGGCGGCTGCAGAGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAc      <  2:4449274/93‑1 (MQ=255)

                                                                                    gcgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAcc     <  1:4422563/93‑1 (MQ=255)

                                                                                    gcgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAAcc     <  1:4148138/93‑1 (MQ=255)

                                                                                     cgcAGCAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCt    <  2:2229840/93‑1 (MQ=255)

                                                                                       cagcagGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGa  <  2:5183364/93‑1 (MQ=255)

TCGAGGCTACACCAAACCTGTTTACCCTCGATGGTCGCGTGGATGTCCCTTGGGCGCGCATCGTGGTGCACGATCTGCCGGAAAGCGCAGTAGGCGTCTCCAGCGATGTGGTGATGCTTAACGATAACCTGCAACCGGAAGAGCCGAAAACGGCGTCGATTCCGATTAACAGTAACCTGA  >  NC_000913/4444600‑4444779

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 20 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`