BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,546,975	T→C	V200A (GTG→GCG)	fimH →	minor fimbrial subunit

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,546,975	0	T	C	100.0%	736.0 / NA	225	V200A (GTG→GCG)	fimH	minor fimbrial subunit
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (131/94); total (131/94)

Only 100 of 236 total aligned reads displayed.

ACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGCAACTCGATTT  >  NC_000913/4546885‑4547064

aCGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAgcgc                                                                                         >  1:3145718/1‑93 (MQ=255)

aCGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAgcgc                                                                                         <  2:578529/93‑1 (MQ=255)

aCGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAgcgc                                                                                         >  2:2718070/1‑93 (MQ=255)

 cGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGcc                                                                                        >  1:4016463/1‑93 (MQ=255)

 cGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGcc                                                                                        >  2:2893129/1‑93 (MQ=255)

  gCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCa                                                                                       <  1:4628317/93‑1 (MQ=255)

  gCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCa                                                                                       >  1:3734272/1‑93 (MQ=255)

   ccAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTCCCCTGGTTCAGCGCCaa                                                                                      <  1:2308522/93‑1 (MQ=255)

    cAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAAt                                                                                     <  1:3543875/93‑1 (MQ=255)

    cAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAAt                                                                                     <  1:6150812/93‑1 (MQ=255)

    cAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAAt                                                                                     <  1:2493514/93‑1 (MQ=255)

     aataatGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAAtt                                                                                    >  2:654559/1‑93 (MQ=255)

      ataatGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTc                                                                                   <  2:5673858/93‑1 (MQ=255)

      ataatGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTc                                                                                   <  2:3546807/93‑1 (MQ=255)

         atgatgTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCctc                                                                                <  1:538163/93‑1 (MQ=255)

         atgatgTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCctc                                                                                >  1:74740/1‑93 (MQ=255)

             tgtgGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCCATTCCTCtttc                                                                            >  2:3276937/1‑91 (MQ=255)

                 gtggtgCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGtt                                                                        >  2:3854723/1‑93 (MQ=255)

                   ggtgCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTa                                                                      >  1:391363/1‑93 (MQ=255)

                    gtgCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTAt                                                                     <  1:4094992/93‑1 (MQ=255)

                    gtgCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTAt                                                                     >  2:709269/1‑93 (MQ=255)

                     tgCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTAtt                                                                    <  1:4362041/93‑1 (MQ=255)

                       ccTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATtgt                                                                  <  2:5521635/93‑1 (MQ=255)

                       ccTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATtgt                                                                  <  2:5989435/93‑1 (MQ=255)

                         tACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGc                                                                <  1:4721671/93‑1 (MQ=255)

                         tACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGc                                                                >  1:1545334/1‑93 (MQ=255)

                         tACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGc                                                                >  2:4594574/1‑93 (MQ=255)

                          aCTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCg                                                               >  1:3291521/1‑93 (MQ=255)

                            tGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGaa                                                             >  2:2059940/1‑93 (MQ=255)

                             ggcggcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGaaa                                                            <  1:6012367/93‑1 (MQ=255)

                             ggcggcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGaaa                                                            >  2:2044387/1‑93 (MQ=255)

                             ggcggcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGaaa                                                            <  2:2374079/93‑1 (MQ=255)

                             ggcggcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGaaa                                                            >  2:1702764/1‑93 (MQ=255)

                             ggcggcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGaaa                                                            >  2:2382798/1‑93 (MQ=255)

                              gcggcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGaaaa                                                           >  2:4289828/1‑93 (MQ=255)

                                 gcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGcc                                                        <  1:5601468/93‑1 (MQ=255)

                                 gcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGcc                                                        >  1:1514485/1‑93 (MQ=255)

                                 gcTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGcc                                                        <  2:3667828/93‑1 (MQ=255)

                                   tGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCaa                                                      <  2:5728439/93‑1 (MQ=255)

                                     cGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCaaaa                                                    <  1:1105615/93‑1 (MQ=255)

                                      gATGTTTCTGCTCGTGATGTCCCCGTTACTCTGCCGGACTGCCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAAc                                                   <  2:5374328/93‑1 (MQ=255)

                                      gATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAAc                                                   >  1:5262384/1‑93 (MQ=255)

                                      gATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAAc                                                   >  2:2835713/1‑93 (MQ=255)

                                      gATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAAc                                                   <  1:6289601/93‑1 (MQ=255)

                                       aTGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAAcc                                                  >  1:2653006/1‑93 (MQ=255)

                                        tGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCt                                                 >  1:1339545/1‑93 (MQ=255)

                                        tGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCt                                                 >  1:5113590/1‑93 (MQ=255)

                                         gTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTg                                                >  1:6223803/1‑93 (MQ=255)

                                          tttCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTgg                                               >  1:1952258/1‑93 (MQ=255)

                                           ttCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTggg                                              <  1:2403585/93‑1 (MQ=255)

                                           ttCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTggg                                              <  2:6292973/93‑1 (MQ=255)

                                           ttCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTggg                                              <  1:25603/93‑1 (MQ=255)

                                           ttCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTggg                                              >  2:5397558/1‑93 (MQ=255)

                                            tCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTgggg                                             >  2:1138609/1‑93 (MQ=255)

                                             cTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGt                                            <  2:5079649/93‑1 (MQ=255)

                                              tGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTa                                           >  2:895647/1‑93 (MQ=255)

                                               gCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTAt                                          <  1:2940167/93‑1 (MQ=255)

                                                cTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTAtt                                         <  1:3181143/93‑1 (MQ=255)

                                                 tCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTa                                        <  2:162192/93‑1 (MQ=255)

                                                 tCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTa                                        >  1:4107314/1‑93 (MQ=255)

                                                 tCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTa                                        >  2:2759976/1‑93 (MQ=255)

                                                  cGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTAc                                       <  2:3303311/93‑1 (MQ=255)

                                                   gTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTAcc                                      >  2:3700070/1‑93 (MQ=255)

                                                   gTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTAcc                                      >  1:2207949/1‑93 (MQ=255)

                                                     gATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACctc                                    >  1:3452683/1‑93 (MQ=255)

                                                      aTGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACctct                                   <  2:4738982/93‑1 (MQ=255)

                                                       tGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCtctc                                  <  2:1800018/93‑1 (MQ=255)

                                                        gTCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTcc                                 >  2:2800597/1‑93 (MQ=255)

                                                         tCACCGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCg                                >  1:3828804/1‑93 (MQ=255)

                                                            ccGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGca                             >  1:1732461/1‑93 (MQ=255)

                                                             cGTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGcac                            <  2:3343723/93‑1 (MQ=255)

                                                              gTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGcaca                           >  1:1455619/1‑93 (MQ=255)

                                                              gTTACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGcaca                           >  1:1231091/1‑93 (MQ=255)

                                                               ttACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACaa                          >  2:3991179/1‑93 (MQ=255)

                                                                tACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAAc                         <  1:2012754/93‑1 (MQ=255)

                                                                tACTCTGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGCCACAAc                         <  2:1506728/93‑1 (MQ=255)

                                                                    ctGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCa                     <  2:1970069/93‑1 (MQ=255)

                                                                    ctGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCa                     <  2:437320/93‑1 (MQ=255)

                                                                    ctGCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCa                     <  2:5020860/93‑1 (MQ=255)

                                                                      gCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGa                   <  2:605071/93‑1 (MQ=255)

                                                                      gCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGa                   <  1:4935131/93‑1 (MQ=255)

                                                                      gCCGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGa                   <  1:5283674/93‑1 (MQ=255)

                                                                        cGGACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATg                 <  2:4498393/93‑1 (MQ=255)

                                                                         ggACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGc                >  1:4392985/1‑93 (MQ=255)

                                                                         ggACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGc                >  2:1524425/1‑93 (MQ=255)

                                                                          gACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCg               <  2:1007245/93‑1 (MQ=255)

                                                                          gACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCg               >  1:1806863/1‑93 (MQ=255)

                                                                          gACTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCg               >  1:1738790/1‑93 (MQ=255)

                                                                           aCTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCgg              >  2:3444666/1‑93 (MQ=255)

                                                                           aCTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCgg              <  2:880717/93‑1 (MQ=255)

                                                                            cTACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCggg             >  1:4862046/1‑93 (MQ=255)

                                                                             tACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGc            >  1:6117690/1‑93 (MQ=255)

                                                                             tACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGc            >  1:424027/1‑93 (MQ=255)

                                                                             tACCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGc            >  1:4581813/1‑93 (MQ=255)

                                                                              aCCCTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGCa           >  2:2539714/1‑93 (MQ=255)

                                                                               cccTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGCaa          >  1:5657528/1‑93 (MQ=255)

                                                                                ccTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGTTATTACCTCTCCGGCACAACCGCAGATGCGGGCAAc         <  1:825104/93‑1 (MQ=255)

                                                                                ccTGGTTCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGCAAc         >  1:2788191/1‑93 (MQ=255)

                                                                                     ttCAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGCAACTCGAt    >  2:5160854/1‑93 (MQ=255)

                                                                                       cAGCGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGCAACTCGAttt  >  1:2875254/1‑93 (MQ=255)

ACGCCAATAATGATGTGGTGGTGCCTACTGGCGGCTGCGATGTTTCTGCTCGTGATGTCACCGTTACTCTGCCGGACTACCCTGGTTCAGTGCCAATTCCTCTTACCGTTTATTGTGCGAAAAGCCAAAACCTGGGGTATTACCTCTCCGGCACAACCGCAGATGCGGGCAACTCGATTT  >  NC_000913/4546885‑4547064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`