BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,554,777	A→G	A72A (GCA→GCG)	b4326 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,554,777	0	A	G	100.0%	950.1 / NA	293	A72A (GCA→GCG)	b4326	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (140/153); total (140/153)

Only 100 of 297 total aligned reads displayed.

ATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCACTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGATAAT  >  NC_000913/4554687‑4554866

aTTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCt                                                                                         >  2:3823667/1‑93 (MQ=255)

aTTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCt                                                                                         >  2:3275823/1‑93 (MQ=255)

aTTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCt                                                                                         >  1:3070271/1‑93 (MQ=255)

 ttACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTg                                                                                        <  1:722674/93‑1 (MQ=255)

  tACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGCTCTGCGCTGt                                                                                       >  1:4306189/1‑93 (MQ=255)

    cTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTa                                                                                     <  2:6212758/93‑1 (MQ=255)

     ttGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTAt                                                                                    >  1:4847768/1‑93 (MQ=255)

      tGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTAtt                                                                                   <  1:4376850/93‑1 (MQ=255)

      tGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTAtt                                                                                   <  1:840105/93‑1 (MQ=255)

       gTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTAttt                                                                                  >  1:3734881/1‑93 (MQ=255)

       gTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTAttt                                                                                  <  2:4296756/93‑1 (MQ=255)

        tttCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTc                                                                                 <  1:50468/93‑1 (MQ=255)

        tttCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTc                                                                                 <  1:5574739/93‑1 (MQ=255)

           cAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATg                                                                              <  2:4144360/93‑1 (MQ=255)

           cAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATg                                                                              <  1:2588776/93‑1 (MQ=255)

                aTGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCa                                                                         >  2:4458152/1‑93 (MQ=255)

                aTGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCa                                                                         >  2:5632557/1‑93 (MQ=255)

                 tGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCAc                                                                        <  2:4990573/93‑1 (MQ=255)

                  gCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACg                                                                       <  2:4726705/93‑1 (MQ=255)

                   cccGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACgg                                                                      >  1:2189543/1‑93 (MQ=255)

                    ccGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGa                                                                     <  1:6016054/93‑1 (MQ=255)

                     cGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGAt                                                                    >  2:4919382/1‑93 (MQ=255)

                     cGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGAt                                                                    <  1:5352018/93‑1 (MQ=255)

                     cGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGAt                                                                    >  1:4110151/1‑93 (MQ=255)

                      gAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGAtt                                                                   >  2:5712339/1‑93 (MQ=255)

                       aGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTg                                                                  <  1:4595128/93‑1 (MQ=255)

                        gTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTgc                                                                 >  2:2087441/1‑93 (MQ=255)

                         tGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTgcg                                                                <  1:3095732/93‑1 (MQ=255)

                           gCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTgcggc                                                              >  2:5568770/1‑93 (MQ=255)

                           gCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTgcggc                                                              >  1:5167977/1‑93 (MQ=255)

                           gCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTgcggc                                                              >  2:1054957/1‑93 (MQ=255)

                             aaGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGt                                                            <  2:3005695/93‑1 (MQ=255)

                             aaGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGt                                                            <  2:4699149/93‑1 (MQ=255)

                             aaGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGt                                                            >  1:5802407/1‑93 (MQ=255)

                              aGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGtt                                                           <  2:3114022/93‑1 (MQ=255)

                                tGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGc                                                         >  2:1263249/1‑93 (MQ=255)

                                 gCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGcg                                                        >  2:1595341/1‑92 (MQ=255)

                                 gCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCa                                                        >  1:3181173/1‑93 (MQ=255)

                                  cATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAg                                                       <  1:1070128/93‑1 (MQ=255)

                                   aTAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAgg                                                      >  1:5949980/1‑93 (MQ=255)

                                   aTAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAgg                                                      <  2:1472629/93‑1 (MQ=255)

                                    tAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGt                                                     <  2:5412541/93‑1 (MQ=255)

                                     aaCCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGCTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGtt                                                    >  1:3349251/1‑93 (MQ=255)

                                       cccGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTaa                                                  >  1:3494580/1‑93 (MQ=255)

                                        ccGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAAt                                                 >  1:2089288/1‑93 (MQ=255)

                                        ccGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAAt                                                 <  2:1315264/93‑1 (MQ=255)

                                          gAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAAttt                                               <  2:4768291/93‑1 (MQ=255)

                                            gCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGa                                             >  2:3572058/1‑93 (MQ=255)

                                             cGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGaa                                            <  1:2072963/93‑1 (MQ=255)

                                               aCAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaag                                          >  2:3660342/1‑93 (MQ=255)

                                               aCAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaag                                          >  2:4958883/1‑93 (MQ=255)

                                                cAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaaga                                         <  2:2437538/93‑1 (MQ=255)

                                                cAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaaga                                         >  1:2037502/1‑93 (MQ=255)

                                                cAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaaga                                         <  1:5003605/93‑1 (MQ=255)

                                                cAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaaga                                         >  1:1150895/1‑93 (MQ=255)

                                                 aaaCATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaagaa                                        <  1:5410697/93‑1 (MQ=255)

                                                  aaCATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaagaag                                       <  2:5912123/93‑1 (MQ=255)

                                                  aaCATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaagaag                                       <  2:629625/93‑1 (MQ=255)

                                                  aaCATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaagaag                                       >  2:2826051/1‑93 (MQ=255)

                                                  aaCATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAaagaag                                       >  2:1880824/1‑93 (MQ=255)

                                                    cATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCg                                     >  1:784242/1‑93 (MQ=255)

                                                     aTCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGt                                    >  1:4469252/1‑93 (MQ=255)

                                                      tctcCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTa                                   >  1:1566717/1‑93 (MQ=255)

                                                      tctcCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTa                                   <  1:3896965/93‑1 (MQ=255)

                                                      tctcCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTa                                   <  1:2720312/93‑1 (MQ=255)

                                                      tctcCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTa                                   <  1:6124323/93‑1 (MQ=255)

                                                      tctcCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTa                                   <  1:1657221/93‑1 (MQ=255)

                                                       ctcCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTAc                                  <  2:2236953/93‑1 (MQ=255)

                                                         ccAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTg                                <  1:4298075/93‑1 (MQ=255)

                                                            gagCTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCca                             <  2:2764657/93‑1 (MQ=255)

                                                               cTGGTATTGCCGTTAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTTCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTACCacac                          >  2:804498/1‑93 (MQ=255)

                                                               cTGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCacac                          >  2:5186343/1‑93 (MQ=255)

                                                                tGGTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACAct                         <  1:1129801/93‑1 (MQ=255)

                                                                  gTATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACActct                       <  2:2510141/93‑1 (MQ=255)

                                                                   tATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTg                      <  2:4206671/93‑1 (MQ=255)

                                                                   tATTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTg                      <  1:18921/93‑1 (MQ=255)

                                                                   tATTCCCGTGAGCTGCGTTCTGCGCTGTTATTGCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTg                      <  2:6001671/93‑1 (MQ=255)

                                                                    aTTGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTgg                     <  2:5515303/93‑1 (MQ=255)

                                                                     ttGCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGc                    <  1:1306253/93‑1 (MQ=255)

                                                                       gCCGTCAGGTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGCACTGCCACACTCTGGCgg                  >  2:5827138/1‑92 (MQ=255)

                                                                       gCCGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGa                  <  2:6093075/93‑1 (MQ=255)

                                                                        ccGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGAt                 >  2:2946508/1‑93 (MQ=255)

                                                                        ccGTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGAt                 <  2:2011668/93‑1 (MQ=255)

                                                                          gTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCa               >  2:5316471/1‑93 (MQ=255)

                                                                          gTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCa               >  1:4012025/1‑93 (MQ=255)

                                                                          gTCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGGTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCa               >  2:2397328/1‑93 (MQ=255)

                                                                           tCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAg              <  2:320076/93‑1 (MQ=255)

                                                                           tCAGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAg              >  1:5881675/1‑93 (MQ=255)

                                                                             aGCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGcc            >  1:4740920/1‑93 (MQ=255)

                                                                              gCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCt           <  1:4213868/93‑1 (MQ=255)

                                                                              gCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCt           <  1:2842532/93‑1 (MQ=255)

                                                                              gCTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCt           <  1:1205819/93‑1 (MQ=255)

                                                                               cTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCtt          <  2:6194889/93‑1 (MQ=255)

                                                                               cTGCGTTCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCtt          >  2:88268/1‑93 (MQ=255)

                                                                                    ttCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGAt     >  1:3397599/1‑93 (MQ=255)

                                                                                    ttCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGAt     <  1:5737635/93‑1 (MQ=255)

                                                                                    ttCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGAt     >  2:959377/1‑93 (MQ=255)

                                                                                     tCTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGATa    <  1:6243750/93‑1 (MQ=255)

                                                                                      cTGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGATaa   <  2:1741828/93‑1 (MQ=255)

                                                                                       tGCGCTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGATAAt  >  2:5460647/1‑93 (MQ=255)

ATTACTTGTTTCAGGCATGCCCGAGTGGCAAGTGCATAACCCGAGCGACAAACATCTCCAGAGCTGGTATTGCCGTCAGCTGCGTTCTGCACTGTTATTTCATGAGCCACGGATTGCGGCGTTGCAGGTTAATTTGAAAGAAGCGTACTGCCACACTCTGGCGATCAGCCTTGAGATAAT  >  NC_000913/4554687‑4554866

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`