BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,572,114	T→C	R137R (CGT→CGC)	yjiU →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,572,114	0	T	C	100.0%	850.1 / NA	264	R137R (CGT→CGC)	yjiU	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (127/137); total (127/137)

Only 100 of 273 total aligned reads displayed.

ATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGTGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGA  >  NC_000913/4572025‑4572203

  tCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACt                                                                                      <  2:5724723/93‑1 (MQ=255)

   ccGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTa                                                                                     <  2:1598973/93‑1 (MQ=255)

    cGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTAt                                                                                    <  1:693275/93‑1 (MQ=255)

     gCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTAtt                                                                                   >  1:1320234/1‑93 (MQ=255)

     gCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTAtt                                                                                   >  1:5524376/1‑93 (MQ=255)

      cTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTa                                                                                  <  2:525555/93‑1 (MQ=255)

      cTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTa                                                                                  <  1:5234499/93‑1 (MQ=255)

      cTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTa                                                                                  <  1:4937020/93‑1 (MQ=255)

      cTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTa                                                                                  <  1:4794754/93‑1 (MQ=255)

        gATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAgg                                                                                >  2:3713734/1‑93 (MQ=255)

        gATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAgg                                                                                <  2:2585837/93‑1 (MQ=255)

        gATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAgg                                                                                >  1:3714727/1‑93 (MQ=255)

         attattAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGt                                                                               <  2:4744284/93‑1 (MQ=255)

         attattAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGt                                                                               <  2:1165054/93‑1 (MQ=255)

          ttattaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTg                                                                              >  1:1154566/1‑93 (MQ=255)

          ttattaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTg                                                                              >  2:3097081/1‑93 (MQ=255)

           tattaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTgg                                                                             <  1:3085716/93‑1 (MQ=255)

           tattaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTgg                                                                             >  2:1861695/1‑93 (MQ=255)

            attaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTggg                                                                            >  2:4906972/1‑93 (MQ=255)

            attaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTACTCGGTggg                                                                            >  1:1481203/1‑93 (MQ=255)

             ttaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGc                                                                           >  1:664729/1‑93 (MQ=255)

             ttaATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGc                                                                           <  1:2891025/93‑1 (MQ=255)

              taATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGcc                                                                          >  2:412404/1‑93 (MQ=255)

                 tGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAtt                                                                       >  2:1789859/1‑93 (MQ=255)

                  gATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAttt                                                                      <  2:4095848/93‑1 (MQ=255)

                   atatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAtttt                                                                     >  1:4493314/1‑93 (MQ=255)

                   atatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCAtttt                                                                     <  2:1720932/93‑1 (MQ=255)

                    tatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTa                                                                    <  1:4555571/93‑1 (MQ=255)

                    tatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTa                                                                    <  2:4389161/93‑1 (MQ=255)

                    tatTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTa                                                                    <  1:5489544/93‑1 (MQ=255)

                     atTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTAc                                                                   <  2:621879/93‑1 (MQ=255)

                     atTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTAc                                                                   >  1:3467733/1‑93 (MQ=255)

                      ttGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACg                                                                  <  2:2146015/93‑1 (MQ=255)

                          aCAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTAc                                                              >  1:6219939/1‑93 (MQ=255)

                           cAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACt                                                             >  1:6276437/1‑93 (MQ=255)

                            aGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTa                                                            <  1:3413329/93‑1 (MQ=255)

                            aGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGGGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGGCATTTTACGTTACTa                                                            >  2:1390049/1‑93 (MQ=255)

                             ggTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTaa                                                           <  1:2454185/93‑1 (MQ=255)

                              gTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAat                                                          >  2:952086/1‑93 (MQ=255)

                              gTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAat                                                          <  1:5175701/93‑1 (MQ=255)

                               tttGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAata                                                         <  1:2620436/93‑1 (MQ=255)

                               tttGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAata                                                         <  2:2841766/93‑1 (MQ=255)

                                 tGTAGTGCCAGTGGCTGTGGCTACAGTGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATc                                                       >  2:1144131/1‑93 (MQ=255)

                                   tAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGt                                                     <  1:5699351/93‑1 (MQ=255)

                                     gTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGc                                                   <  2:517586/93‑1 (MQ=255)

                                      tGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGcc                                                  >  2:3165233/1‑93 (MQ=255)

                                        ccAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGTCCATTTTACGTTACTAATATCGTGCCCa                                                <  1:410076/93‑1 (MQ=255)

                                         cAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCAc                                               <  1:4390264/93‑1 (MQ=255)

                                         cAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCAc                                               <  2:5595557/93‑1 (MQ=255)

                                          aGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCAcc                                              >  2:5380291/1‑93 (MQ=255)

                                           gtggctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCg                                             >  2:6047623/1‑93 (MQ=255)

                                            tggctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGt                                            >  1:1836049/1‑93 (MQ=255)

                                             ggctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGtt                                           <  1:5785693/93‑1 (MQ=255)

                                               ctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCt                                         <  2:2421834/93‑1 (MQ=255)

                                               ctgtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCt                                         >  2:3546169/1‑93 (MQ=255)

                                                 gtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTag                                       <  1:2635777/93‑1 (MQ=255)

                                                 gtggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTag                                       <  2:5406851/93‑1 (MQ=255)

                                                  tggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTaga                                      >  2:3301397/1‑93 (MQ=255)

                                                   ggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTagag                                     >  2:506271/1‑93 (MQ=255)

                                                   ggctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTagag                                     <  1:465048/93‑1 (MQ=255)

                                                    gctACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGt                                    >  1:1920913/1‑93 (MQ=255)

                                                      tACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAt                                  >  2:4170788/1‑93 (MQ=255)

                                                       aCAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAtt                                 <  1:3784612/93‑1 (MQ=255)

                                                       aCAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAtt                                 <  1:2002837/93‑1 (MQ=255)

                                                       aCAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAtt                                 <  2:4299818/93‑1 (MQ=255)

                                                       aCAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTAtt                                 >  1:4661297/1‑93 (MQ=255)

                                                         agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt                               <  2:3872760/93‑1 (MQ=255)

                                                         agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt                               <  1:2505910/93‑1 (MQ=255)

                                                         agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt                               <  2:2205804/93‑1 (MQ=255)

                                                         agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt                               >  1:509288/1‑93 (MQ=255)

                                                         agagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGt                               <  1:6121147/93‑1 (MQ=255)

                                                          gagGCATGTGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTc                              >  2:6151429/1‑93 (MQ=255)

                                                          gagGCATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTc                              <  2:1450255/93‑1 (MQ=255)

                                                              cATGAGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGa                          >  2:6288809/1‑93 (MQ=255)

                                                                  aGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACttt                      <  2:2010602/93‑1 (MQ=255)

                                                                  aGTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACttt                      >  2:3255460/1‑93 (MQ=255)

                                                                   gTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTa                     <  2:4262314/93‑1 (MQ=255)

                                                                   gTGGGAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTa                     >  1:1060831/1‑93 (MQ=255)

                                                                     gggAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTAcc                   <  2:5938373/93‑1 (MQ=255)

                                                                     gggAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTAcc                   >  2:4693362/1‑93 (MQ=255)

                                                                       gAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAg                 >  1:3546950/1‑93 (MQ=255)

                                                                       gAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAg                 <  1:2772514/93‑1 (MQ=255)

                                                                       gAAACAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAg                 <  1:4245625/93‑1 (MQ=255)

                                                                           cAGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGtgat             <  2:276570/93‑1 (MQ=255)

                                                                            aGCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGtgatg            >  1:1512228/1‑93 (MQ=255)

                                                                             gCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGtgatga           >  2:1023132/1‑93 (MQ=255)

                                                                             gCCCTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGtgatga           <  2:5432193/93‑1 (MQ=255)

                                                                              cccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGaa          <  2:132638/93‑1 (MQ=255)

                                                                              cccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGaa          <  1:2987121/93‑1 (MQ=255)

                                                                               ccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAg         <  1:5317274/93‑1 (MQ=255)

                                                                               ccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAg         <  1:2223099/93‑1 (MQ=255)

                                                                               ccTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAg         >  2:5957967/1‑93 (MQ=255)

                                                                                cTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAgg        >  1:547573/1‑93 (MQ=255)

                                                                                cTTCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAgg        >  2:79666/1‑93 (MQ=255)

                                                                                 ttCCGGCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAAGc       >  2:3930036/1‑93 (MQ=255)

                                                                                     ggCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCCGTGATGAAGGCAAag   >  2:2516238/1‑93 (MQ=255)

                                                                                     ggCGCGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAag   >  1:3648977/1‑93 (MQ=255)

                                                                                      gcgcgcACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAaga  <  1:736187/93‑1 (MQ=255)

                                                                                      gcgcgcACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAaga  <  2:4509860/93‑1 (MQ=255)

                                                                                      gcgcgcACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAaga  <  1:332795/93‑1 (MQ=255)

ATTCCGCTGATTATTAATGATATTGAACAGGTTTGTAGTGCCAGTGGCTGTGGCTACAGAGGCATGAGTGGGAAACAGCCCTTCCGGCGTGCACTATTAGGTGGGCCATTTTACGTTACTAATATCGTGCCCACCGTTCTAGAGTATTGTCAGGACTTTACCAGTGATGAAGGCAAAGA  >  NC_000913/4572025‑4572203

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`