BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	4,593,528	T→C	intergenic (‑215/‑16)	yjjM ← / → yjjN	hypothetical protein/putative oxidoreductase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	4,593,528	0	T	C	100.0%	945.2 / NA	284	intergenic (‑215/‑16)	yjjM/yjjN	hypothetical protein/putative oxidoreductase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (172/112); total (172/112)

Only 100 of 291 total aligned reads displayed.

TCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATATCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAAACAACG  >  NC_000913/4593438‑4593617

tCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCt                                                                                         >  1:669302/1‑93 (MQ=255)

  cATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTaa                                                                                       <  1:1015954/93‑1 (MQ=255)

   aTTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTCAg                                                                                      >  2:1997055/1‑93 (MQ=255)

   aTTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAg                                                                                      >  1:2875970/1‑93 (MQ=255)

    ttAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAgg                                                                                     <  1:1263936/93‑1 (MQ=255)

     tAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGc                                                                                    >  1:2551521/1‑93 (MQ=255)

       aaaCCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGcaa                                                                                  <  1:5829706/93‑1 (MQ=255)

       aaaCCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGcaa                                                                                  >  1:4533218/1‑93 (MQ=255)

        aaCCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGcaac                                                                                 <  2:4902807/93‑1 (MQ=255)

         aCCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGcaaca                                                                                >  1:5961065/1‑93 (MQ=255)

         aCCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGcaaca                                                                                >  1:2561699/1‑93 (MQ=255)

          cccGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGcaacaa                                                                               >  2:2126465/1‑93 (MQ=255)

           ccGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACaaa                                                                              <  1:5160124/93‑1 (MQ=255)

           ccGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACaaa                                                                              >  1:171424/1‑93 (MQ=255)

             gATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACaaaaa                                                                            >  1:2346814/1‑93 (MQ=255)

             gATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACaaaaa                                                                            >  2:3648184/1‑93 (MQ=255)

             gATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACaaaaa                                                                            >  1:3279440/1‑93 (MQ=255)

              aTTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAg                                                                           >  2:5559830/1‑93 (MQ=255)

               tttAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGt                                                                          >  2:3741197/1‑93 (MQ=255)

               tttAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGt                                                                          <  1:542908/93‑1 (MQ=255)

               tttAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGt                                                                          <  1:3668548/93‑1 (MQ=255)

                ttAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTg                                                                         >  2:5966428/1‑93 (MQ=255)

                ttAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTg                                                                         <  2:883289/93‑1 (MQ=255)

                 ttaaaaATTTTTATGCGTGTGTTTTTACAAAAAAAATTTTTCGGTTCCCTGCCATTTTTTATTTTTATTGATACCTAAAGCAACAAAAAGTgg                                                                        >  2:1872838/3‑93 (MQ=255)

                  aaaaCATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGga                                                                       <  1:2135475/93‑1 (MQ=255)

                  aaaaCATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGga                                                                       <  1:2822079/93‑1 (MQ=255)

                   aaaCATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGgag                                                                      <  2:2625594/93‑1 (MQ=255)

                   aaaCATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGgag                                                                      >  2:1732806/1‑93 (MQ=255)

                    aaCATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGgaga                                                                     >  2:1130694/1‑93 (MQ=255)

                      cATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGc                                                                   <  2:2883086/93‑1 (MQ=255)

                       aTTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGcc                                                                  >  2:4457078/1‑93 (MQ=255)

                        tttttATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCg                                                                 >  1:3538283/1‑93 (MQ=255)

                        tttttATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCg                                                                 <  2:2193036/93‑1 (MQ=255)

                           ttATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAAt                                                              <  2:2329199/93‑1 (MQ=255)

                            tATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCCTTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATc                                                             >  2:834196/1‑93 (MQ=255)

                            tATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGACGAATc                                                             >  2:977365/1‑93 (MQ=255)

                             aTGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCa                                                            <  2:2772076/93‑1 (MQ=255)

                               gCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATg                                                          <  1:556293/93‑1 (MQ=255)

                               gCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATg                                                          <  2:451797/93‑1 (MQ=255)

                                 gtgtgtTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTc                                                        <  1:4104501/93‑1 (MQ=255)

                                  tgtgtTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCt                                                       >  2:6055929/1‑93 (MQ=255)

                                   gtgtTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTa                                                      <  1:1339920/93‑1 (MQ=255)

                                   gtgtTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTa                                                      <  2:3179267/93‑1 (MQ=255)

                                   gtgtTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTa                                                      >  2:1947229/1‑93 (MQ=255)

                                     gtTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACg                                                    <  1:3655771/93‑1 (MQ=255)

                                        ttCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATg                                                 >  2:1509955/1‑93 (MQ=255)

                                         tCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGa                                                <  2:2435485/93‑1 (MQ=255)

                                         tCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGa                                                >  2:6241846/1‑93 (MQ=255)

                                          cacaAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGaa                                               >  1:2011920/1‑93 (MQ=255)

                                             aaaaaaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGt                                            >  2:5033946/1‑93 (MQ=255)

                                              aaaaaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGtt                                           >  1:3044302/1‑93 (MQ=255)

                                              aaaaaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGtt                                           <  2:5094401/93‑1 (MQ=255)

                                                aaaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGtttt                                         >  2:4240771/1‑93 (MQ=255)

                                                aaaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGtttt                                         >  1:5621791/1‑93 (MQ=255)

                                                aaaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGtttt                                         >  2:4019136/1‑93 (MQ=255)

                                                aaaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGtttt                                         <  2:657008/93‑1 (MQ=255)

                                                 aaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTa                                        >  2:3539371/1‑93 (MQ=255)

                                                 aaGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTa                                        >  1:446370/1‑93 (MQ=255)

                                                   gATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAAt                                      >  1:5686007/1‑93 (MQ=255)

                                                   gATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAAt                                      >  1:2990729/1‑93 (MQ=255)

                                                   gATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAAt                                      <  2:507644/93‑1 (MQ=255)

                                                   gATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAAt                                      >  1:1837003/1‑93 (MQ=255)

                                                    aTTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAAtt                                     <  1:4200208/93‑1 (MQ=255)

                                                     ttttCCGTTCCGCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAAttt                                    <  1:139606/93‑1 (MQ=255)

                                                        tccgttccgCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGcc                                 <  1:1080977/93‑1 (MQ=255)

                                                            ttccgCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCcagca                             <  1:3397307/93‑1 (MQ=255)

                                                            ttccgCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCcagca                             <  2:1272459/93‑1 (MQ=255)

                                                            gcccgCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGCACAGACGAATCATGTCTCCGATGAATGTTTTAATTTGCcagca                             <  2:6185812/91‑1 (MQ=255)

                                                             tccgCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCcagcag                            >  1:4813908/1‑93 (MQ=255)

                                                              ccgCTGCCATTTTTCATTTTCATTGGTACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCagcagc                           >  1:3123957/1‑93 (MQ=255)

                                                              ccgCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCagcagc                           <  2:3352291/93‑1 (MQ=255)

                                                               cgCTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGcc                          >  1:4669602/1‑93 (MQ=255)

                                                                 cTGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGa                        >  2:1837366/1‑93 (MQ=255)

                                                                  tGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGaa                       >  2:3583164/1‑93 (MQ=255)

                                                                  tGCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGaa                       <  1:893422/93‑1 (MQ=255)

                                                                   gCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGaaa                      >  1:6103137/1‑93 (MQ=255)

                                                                   gCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGaaa                      >  2:3426941/1‑93 (MQ=255)

                                                                   gCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGaaa                      >  2:580122/1‑93 (MQ=255)

                                                                   gCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGaaa                      >  1:816586/1‑93 (MQ=255)

                                                                   gCCATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGaaa                      >  2:5522651/1‑93 (MQ=255)

                                                                     cATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGa                    <  1:381406/93‑1 (MQ=255)

                                                                     cATTTTTCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGa                    >  1:4405391/1‑93 (MQ=255)

                                                                       tttttCATTTTCATTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAAt                  >  2:5374149/1‑93 (MQ=255)

                                                                        ttttcattttcaTTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAAtt                 >  2:4317256/1‑93 (MQ=255)

                                                                        ttttcattttcaTTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAAtt                 >  1:547523/1‑93 (MQ=255)

                                                                         tttcattttcatTGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTa                >  2:165351/1‑93 (MQ=255)

                                                                         tttcattttcatTGATACCTAAGGCAACAAAAAGGGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTa                >  1:2800410/1‑93 (MQ=255)

                                                                           tcattttcattGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGt              <  2:4797529/93‑1 (MQ=255)

                                                                           tcattttcattGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGt              >  2:5266959/1‑93 (MQ=255)

                                                                           tcattttcattGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGt              <  1:4073397/93‑1 (MQ=255)

                                                                           tcagtttcattGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGt              <  2:361890/93‑1 (MQ=255)

                                                                            cattttcattGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTc             <  1:4985640/93‑1 (MQ=255)

                                                                            cattttcattGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTc             <  1:574245/93‑1 (MQ=255)

                                                                                 tcattGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGaa        <  1:276359/93‑1 (MQ=255)

                                                                                  cattGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGaaa       >  1:998464/1‑93 (MQ=255)

                                                                                     tGATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAaacaa    <  2:673801/93‑1 (MQ=255)

                                                                                      gATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAaacaac   >  1:5280849/1‑93 (MQ=255)

                                                                                      gATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAaacaac   <  2:3078169/93‑1 (MQ=255)

                                                                                      gATACCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAaacaac   <  2:3018477/93‑1 (MQ=255)

                                                                                       atacCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAAACAAcg  <  1:1904846/93‑1 (MQ=255)

TCCATTAAAACCCGATTTAAAACATTTTTATGCGTGTGTTTTCACAAAAAAGATTTTCCGTTCCGCTGCCATTTTTCATTTTCATTGATATCTAAGGCAACAAAAAGTGGAGAGCCGAATCATGTCTACGATGAATGTTTTAATTTGCCAGCAGCCGAAAGAATTAGTCTGGAAACAACG  >  NC_000913/4593438‑4593617

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`