BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	578,967	T→C	intergenic (‑108/‑136)	ybcV ← / → ybcW	putative envelope protein/hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	578,967	0	T	C	100.0%	919.8 / NA	281	intergenic (‑108/‑136)	ybcV/ybcW	putative envelope protein/hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (148/133); total (148/133)

Only 100 of 290 total aligned reads displayed.

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

cAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAgcgc                                                                                         <  2:2039110/93‑1 (MQ=255)

cAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAgcgc                                                                                         <  1:768255/93‑1 (MQ=255)

  aTCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCgg                                                                                       >  2:2822934/1‑93 (MQ=255)

    cTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTc                                                                                     <  1:6200530/93‑1 (MQ=255)

    cTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTc                                                                                     >  2:4842466/1‑93 (MQ=255)

     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    <  2:3368805/93‑1 (MQ=255)

     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    <  2:4663309/93‑1 (MQ=255)

     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    >  1:2515401/1‑93 (MQ=255)

     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    >  1:2312125/1‑93 (MQ=255)

     tGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTcc                                                                                    <  2:854059/93‑1 (MQ=255)

      ggTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCct                                                                                   <  2:6004482/93‑1 (MQ=255)

      ggTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCct                                                                                   <  2:2093418/93‑1 (MQ=255)

       gTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctg                                                                                  >  1:1572428/1‑93 (MQ=255)

       gTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctg                                                                                  <  1:2669442/93‑1 (MQ=255)

        tCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgc                                                                                 <  2:273840/93‑1 (MQ=255)

        tCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgc                                                                                 >  1:3105780/1‑93 (MQ=255)

         cTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCctgct                                                                                <  2:1766536/93‑1 (MQ=255)

           gACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTgg                                                                              >  1:1026621/1‑93 (MQ=255)

              ctctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCAt                                                                           <  2:4136564/93‑1 (MQ=255)

               tctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCAtt                                                                          >  1:2194060/1‑93 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         <  1:3581035/93‑1 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         <  1:4678708/93‑1 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         <  1:3295946/93‑1 (MQ=255)

                ctTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAATATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTc                                                                         >  2:289412/1‑93 (MQ=255)

                  ttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTg                                                                       <  1:1683356/93‑1 (MQ=255)

                  ttGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTACGTAACAAAGCGCGGTCCTGCTGGCATTCTg                                                                       >  2:3741185/1‑93 (MQ=255)

                    gtgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGa                                                                     <  2:3483293/93‑1 (MQ=255)

                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    >  1:2044305/1‑93 (MQ=255)

                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    <  1:6021877/93‑1 (MQ=255)

                     tgtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAg                                                                    >  1:4769461/1‑93 (MQ=255)

                      gtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAgg                                                                   >  1:1107933/1‑93 (MQ=255)

                      gtTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAgg                                                                   <  1:2884107/93‑1 (MQ=255)

                         ttgttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGaa                                                                >  1:6261042/1‑93 (MQ=255)

                            ttgATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATa                                                             >  1:2098106/1‑93 (MQ=255)

                             tgatgaTTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATAc                                                            <  2:5880013/93‑1 (MQ=255)

                              gatgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACa                                                           >  2:5053640/1‑93 (MQ=255)

                                tgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAc                                                         <  2:5482905/93‑1 (MQ=255)

                                tgatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAc                                                         <  2:5774783/93‑1 (MQ=255)

                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        >  2:3830757/1‑93 (MQ=255)

                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        >  2:3912076/1‑93 (MQ=255)

                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        >  2:1110956/1‑93 (MQ=255)

                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        <  1:5548631/93‑1 (MQ=255)

                                 gatTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAAcc                                                        >  1:5722345/1‑93 (MQ=255)

                                  atTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCg                                                       <  1:453648/93‑1 (MQ=255)

                                  atTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCg                                                       >  1:5316919/1‑93 (MQ=255)

                                    ttATGTCGAGTATTAGGAATGTTTTCAATTAATAGTATTGGTTGAGTAACAAAGCGCAGTCCTGCTGGCTTTCTGGTGAAAAATCCAACCgcc                                                     <  2:6301202/93‑3 (MQ=255)

                                      aTGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAg                                                   >  1:5210665/1‑93 (MQ=255)

                                        gTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGat                                                 >  2:5344897/1‑93 (MQ=255)

                                         tCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatg                                                >  2:3511957/1‑93 (MQ=255)

                                           aaaTATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgta                                              <  2:234790/93‑1 (MQ=255)

                                              tatTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGatgtatgt                                           >  1:2771351/1‑93 (MQ=255)

                                               atTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGAtgtatgta                                          <  2:2952963/93‑1 (MQ=255)

                                               atTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGAtgtatgta                                          >  1:3179991/1‑93 (MQ=255)

                                                 tAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAg                                        >  1:6307398/1‑93 (MQ=255)

                                                 tAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAg                                        <  2:4330122/93‑1 (MQ=255)

                                                   ggAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGc                                      >  2:743862/1‑93 (MQ=255)

                                                     aaTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCa                                    <  1:4915414/93‑1 (MQ=255)

                                                      aTGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCaa                                   <  1:5442095/93‑1 (MQ=255)

                                                       tGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAAc                                  >  2:2456064/1‑93 (MQ=255)

                                                         ttttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGt                                >  2:546759/1‑93 (MQ=255)

                                                           ttCAATTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGc                              >  1:708357/1‑93 (MQ=255)

                                                             cAATTAATAGTATTGGTTGCGTATCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTc                            <  2:4528022/93‑1 (MQ=255)

                                                              aaTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCa                           >  1:1831466/1‑93 (MQ=255)

                                                              aaTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCa                           >  2:6170767/1‑93 (MQ=255)

                                                              aaTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCa                           >  1:5869959/1‑93 (MQ=255)

                                                               aTTAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaa                          <  1:3761796/93‑1 (MQ=255)

                                                                ttAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCaaa                         <  1:5016896/93‑1 (MQ=255)

                                                                 tAATAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAc                        >  1:3494010/1‑93 (MQ=255)

                                                                  aaTAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAcc                       >  1:1547388/1‑93 (MQ=255)

                                                                  aaTAGTATAGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAAcc                       <  1:4596807/93‑1 (MQ=255)

                                                                   aTAGTATTGGTTGCCTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCt                      <  1:934460/93‑1 (MQ=255)

                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     <  2:4883977/93‑1 (MQ=255)

                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     >  2:912348/1‑93 (MQ=255)

                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     >  2:1220831/1‑93 (MQ=255)

                                                                    tAGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCtt                     >  1:2692173/1‑93 (MQ=255)

                                                                     aGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTc                    <  2:3133541/93‑1 (MQ=255)

                                                                     aGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTc                    >  2:2171888/1‑93 (MQ=255)

                                                                     aGTATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTc                    >  1:825431/1‑93 (MQ=255)

                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  >  1:5800671/1‑93 (MQ=255)

                                                                       tATTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCAt                  >  2:4567656/1‑93 (MQ=255)

                                                                        aTTGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATa                 >  2:4763955/1‑93 (MQ=255)

                                                                         ttGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATAc                <  2:1650395/93‑1 (MQ=255)

                                                                         ttGGTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATAc                >  1:500168/1‑93 (MQ=255)

                                                                         gtGGTTGCGTAAAAAAGCGCGGTCCTGCTGGCAATCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATAc                <  1:4175779/92‑1 (MQ=255)

                                                                            gTTGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGa             >  2:1858632/1‑93 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           <  2:1021918/93‑1 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           <  2:199848/93‑1 (MQ=255)

                                                                              tGCGTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGaaa           <  2:5263932/93‑1 (MQ=255)

                                                                                 gTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAt        >  1:2857443/1‑93 (MQ=255)

                                                                                 gTAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAt        >  1:5393083/1‑93 (MQ=255)

                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       >  1:188897/1‑93 (MQ=255)

                                                                                  tAACAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAtt       <  1:4301967/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  1:1499051/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  1:3967182/93‑1 (MQ=255)

                                                                                   aaCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGAttt      <  2:1530319/93‑1 (MQ=255)

                                                                                    aCAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTg     >  1:3017600/1‑93 (MQ=255)

                                                                                     cAAAGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGa    <  2:2641041/93‑1 (MQ=255)

                                                                                      aaaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGaa   >  2:3180746/1‑93 (MQ=255)

                                                                                       aaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAg  <  1:1247004/93‑1 (MQ=255)

                                                                                       aaGCGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAg  >  2:5002969/1‑93 (MQ=255)

CAATCTGGTCTGACCTCTTTGTGTTTTGTTGATGATTTATGTCAAATATTAGGAATGTTTTCAATTAATAGTATTGGTTGCGTAACAAAGTGCGGTCCTGCTGGCATTCTGGAGGGAAATACAACCGACAGATGTATGTAAGGCCAACGTGCTCAAACCTTCATACAGAAAGATTTGAAG  >  NC_000913/578877‑579056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 31 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`