BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	592,232	C→T	R57Q (CGA→CAA)	nfrB ←	NfrB

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	592,232	0	C	T	100.0%	759.3 / NA	204	R57Q (CGA→CAA)	nfrB	NfrB
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (114/90); total (114/90)

Only 100 of 216 total aligned reads displayed.

ATATTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTCGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCTGATG  >  NC_000913/592142‑592321

atatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgc                                                                                         <  1:3478379/93‑1 (MQ=255)

atatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgc                                                                                         <  2:5524832/93‑1 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  2:2556245/1‑93 (MQ=255)

 tatTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTtgcg                                                                                        >  2:3005065/1‑93 (MQ=255)

   ttGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCggg                                                                                      <  1:2063350/93‑1 (MQ=255)

      ccGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAg                                                                                   <  1:234825/93‑1 (MQ=255)

      ccGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAg                                                                                   >  2:4872143/1‑93 (MQ=255)

       cGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgc                                                                                  <  1:5249780/93‑1 (MQ=255)

       cGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgc                                                                                  <  2:522557/93‑1 (MQ=255)

         aTGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcgg                                                                                >  2:1907239/1‑93 (MQ=255)

         aTGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcgg                                                                                >  1:5492630/1‑93 (MQ=255)

         aTGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGCTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcgg                                                                                >  1:6169579/1‑93 (MQ=255)

          tGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAgcggc                                                                               >  1:932700/1‑93 (MQ=255)

             cGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGAt                                                                            <  2:1802801/93‑1 (MQ=255)

              gCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATa                                                                           <  2:4316271/93‑1 (MQ=255)

              gCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATa                                                                           >  1:5322236/1‑93 (MQ=255)

               cccGTTTGATGCTACGCCGGAACCATAATCGCTAACGGTAGTTCATCTGGTTGATACAGTTCGCGGTAACTCATTTGCGGGTAGTGGCGATaa                                                                          <  2:2162819/93‑1 (MQ=255)

               cccGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATaa                                                                          >  2:1626098/1‑93 (MQ=255)

                ccGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATaaa                                                                         >  2:1592839/1‑93 (MQ=255)

                 cGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAac                                                                        <  1:5759822/93‑1 (MQ=255)

                  gTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAaca                                                                       >  1:2839987/1‑93 (MQ=255)

                   tttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      >  2:1837750/1‑93 (MQ=255)

                   tttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAacac                                                                      >  2:3676471/1‑93 (MQ=255)

                    ttCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACt                                                                     <  2:4604670/93‑1 (MQ=255)

                       aTTCCACGCCGGAAACATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCaa                                                                  >  1:3367621/1‑93 (MQ=255)

                        ttCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAAc                                                                 >  2:450584/1‑93 (MQ=255)

                          ccACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACtt                                                               >  1:2527541/1‑93 (MQ=255)

                            ccGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGc                                                             <  2:4218013/92‑1 (MQ=255)

                            aCGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGc                                                             >  2:436434/1‑93 (MQ=255)

                            aCGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGc                                                             <  2:5922943/93‑1 (MQ=255)

                            aCGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGc                                                             <  1:1863654/93‑1 (MQ=255)

                            aCGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGc                                                             <  1:4954503/93‑1 (MQ=255)

                              gCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGt                                                           <  1:3953036/93‑1 (MQ=255)

                               ccGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGtt                                                          <  2:3436030/93‑1 (MQ=255)

                               ccGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGtt                                                          >  1:4292084/1‑93 (MQ=255)

                                cGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGttt                                                         >  2:5746123/1‑93 (MQ=255)

                                cGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGttt                                                         >  1:3171882/1‑93 (MQ=255)

                                 ggAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTa                                                        >  2:1140042/1‑93 (MQ=255)

                                 ggAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTa                                                        <  1:291937/93‑1 (MQ=255)

                                  gAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTaa                                                       <  1:1003120/93‑1 (MQ=255)

                                  gAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTaa                                                       >  2:5615639/1‑93 (MQ=255)

                                  gAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTaa                                                       <  1:1588296/93‑1 (MQ=255)

                                   aaCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAAt                                                      <  1:5062620/93‑1 (MQ=255)

                                   aaCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAAt                                                      >  1:1362037/1‑93 (MQ=255)

                                   aaCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAAt                                                      >  2:620632/1‑93 (MQ=255)

                                    aCCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATg                                                     <  1:6282735/93‑1 (MQ=255)

                                      cATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcg                                                   >  2:4852601/1‑93 (MQ=255)

                                      cATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcg                                                   <  2:1541831/93‑1 (MQ=255)

                                      cATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcg                                                   <  2:1226485/93‑1 (MQ=255)

                                       aTAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcgg                                                  <  2:5289483/93‑1 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 <  1:2942192/93‑1 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 <  1:3419519/93‑1 (MQ=255)

                                        tAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggc                                                 <  2:1460497/93‑1 (MQ=255)

                                         aaTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggcg                                                <  1:4519561/93‑1 (MQ=255)

                                         aaTCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATgcggcg                                                <  1:4165839/93‑1 (MQ=255)

                                           tCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTa                                              <  1:3868737/93‑1 (MQ=255)

                                              cTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAccc                                           <  1:5654728/93‑1 (MQ=255)

                                              cTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTAccc                                           >  1:4716563/1‑93 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          <  2:6053254/93‑1 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          <  1:1528095/93‑1 (MQ=255)

                                               tAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCa                                          >  2:3209074/1‑93 (MQ=255)

                                                 aCGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGt                                        >  2:6278520/1‑93 (MQ=255)

                                                  cGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTa                                       >  1:424078/1‑93 (MQ=255)

                                                  cGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATGTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTa                                       <  1:2377087/93‑1 (MQ=255)

                                                  cGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATGTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTa                                       <  1:3275283/93‑1 (MQ=255)

                                                   ggTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAg                                      <  2:2719345/93‑1 (MQ=255)

                                                   ggTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAg                                      >  2:4442865/1‑93 (MQ=255)

                                                    gTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAga                                     <  1:724534/93‑1 (MQ=255)

                                                       tttCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAgacga                                  >  2:4083334/1‑93 (MQ=255)

                                                         tCATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACa                                >  1:5973531/1‑93 (MQ=255)

                                                          cATCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACAt                               >  2:1414443/1‑93 (MQ=255)

                                                           aTCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATc                              >  2:3578253/1‑93 (MQ=255)

                                                           aTCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATc                              >  2:2888868/1‑93 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCa                             >  1:2820056/1‑93 (MQ=255)

                                                            tCTGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCa                             >  2:4019784/1‑93 (MQ=255)

                                                              tGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAAt                           <  2:3364617/93‑1 (MQ=255)

                                                              tGGTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAAt                           >  2:4797301/1‑93 (MQ=255)

                                                               ggTTTATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATa                          >  1:5285830/1‑93 (MQ=255)

                                                                  ttATACAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaa                       <  2:3230958/93‑1 (MQ=255)

                                                                     taCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaaa                    >  1:2199968/1‑93 (MQ=255)

                                                                     taCAGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATaaaaaaa                    >  2:6250767/1‑93 (MQ=255)

                                                                      aCAGTTCGCGGTAACTCATTTGCGGGAAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAAt                   <  1:6301774/93‑1 (MQ=255)

                                                                        aGTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCg                 <  2:6125446/93‑1 (MQ=255)

                                                                         gTTCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGt                <  2:3043297/93‑1 (MQ=255)

                                                                           tCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTcc              >  1:1122271/1‑93 (MQ=255)

                                                                           tCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTcc              <  1:2608726/93‑1 (MQ=255)

                                                                           tCGCGGTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTcc              <  1:1907239/93‑1 (MQ=255)

                                                                               ggTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGcc          >  1:230596/1‑93 (MQ=255)

                                                                                gTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGccc         >  2:3832420/1‑93 (MQ=255)

                                                                                gTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGccc         >  1:5047959/1‑93 (MQ=255)

                                                                                gTAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGccc         >  1:4034763/1‑93 (MQ=255)

                                                                                 tAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCg        >  1:5113496/1‑93 (MQ=255)

                                                                                 tAACTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCg        >  1:4798113/1‑93 (MQ=255)

                                                                                  aaCTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGc       >  1:3298969/1‑93 (MQ=255)

                                                                                   aCTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCt      >  2:4548194/1‑93 (MQ=255)

                                                                                    cTCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtg     <  2:29350/93‑1 (MQ=255)

                                                                                     tCATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtga    >  1:3630330/1‑93 (MQ=255)

                                                                                      cATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgat   >  2:1552728/1‑93 (MQ=255)

                                                                                      cATTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgat   >  2:1273612/1‑93 (MQ=255)

                                                                                       aTTTGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCtgatg  <  2:754043/93‑1 (MQ=255)

ATATTGCCGATGACGCCCGTTTCATTCCACGCCGGAACCATAATCGCTAACGGTTTTTCATCTGGTTTATACAGTTCGCGGTAACTCATTCGCGGGTAGCGGCGATAAACACTCAACTTGCGTTTAATGCGGCGTACCCAGTAGACGACATCAATAAAAAAATCGTCCAGCCCGCTGATG  >  NC_000913/592142‑592321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`