BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	595,469	A→G	Q216R (CAG→CGG)	ylcB →	putative resistance protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	595,469	0	A	G	100.0%	697.9 / NA	216	Q216R (CAG→CGG)	ylcB	putative resistance protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (127/89); total (127/89)

Only 100 of 223 total aligned reads displayed.

CCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGC  >  NC_000913/595379‑595558

 cGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGc                                                                                        <  1:2511952/93‑1 (MQ=255)

 cGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGc                                                                                        >  2:2386098/1‑93 (MQ=255)

  gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       >  1:4232177/1‑93 (MQ=255)

  gaagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCt                                                                                       <  1:1261811/93‑1 (MQ=255)

   aagaaACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTc                                                                                      <  1:3161001/93‑1 (MQ=255)

         cGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCgggg                                                                                <  2:556448/93‑1 (MQ=255)

          gCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGCTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCggggg                                                                               >  1:3630158/1‑92 (MQ=255)

           cTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTg                                                                              >  1:929969/1‑93 (MQ=255)

           cTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTg                                                                              >  1:3010007/1‑93 (MQ=255)

              cGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATa                                                                           >  1:1458242/1‑93 (MQ=255)

               gTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAg                                                                          >  1:6259924/1‑93 (MQ=255)

                tAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGa                                                                         >  2:4725682/1‑93 (MQ=255)

                tAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGa                                                                         >  2:4144150/1‑93 (MQ=255)

                tAATTATCAGCAGTCATATGCGTTAGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGa                                                                         >  2:6071718/1‑93 (MQ=255)

                  aTTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGaaa                                                                       <  1:1161959/93‑1 (MQ=255)

                  aTTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGaaa                                                                       <  1:3994679/93‑1 (MQ=255)

                      tCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAc                                                                   >  1:5373362/1‑93 (MQ=255)

                      tCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTGCTGGCGCTGGACCGGCCTGGCGGGGTGATAGAAAGTAc                                                                   <  2:3936939/93‑1 (MQ=255)

                        agcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAccc                                                                 <  2:1123019/93‑1 (MQ=255)

                        agcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAccc                                                                 >  1:4292811/1‑93 (MQ=255)

                         gcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCg                                                                >  1:1978568/1‑93 (MQ=255)

                         gcagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCg                                                                <  1:5245617/93‑1 (MQ=255)

                          cagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGc                                                               >  1:3278131/1‑93 (MQ=255)

                          cagTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGc                                                               <  2:1493148/93‑1 (MQ=255)

                           agTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCa                                                              >  2:261887/1‑93 (MQ=255)

                           agTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCa                                                              >  2:4832046/1‑93 (MQ=255)

                            gTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAg                                                             >  1:3356290/1‑93 (MQ=255)

                            gTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAg                                                             <  2:5416064/93‑1 (MQ=255)

                            gTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGCACCCGCAg                                                             >  2:4151737/1‑93 (MQ=255)

                             tCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGc                                                            >  2:918790/1‑93 (MQ=255)

                             tCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGc                                                            >  1:2251470/1‑93 (MQ=255)

                              cATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTTATAGAAAGTACCCGCAGCg                                                           >  1:4032442/1‑93 (MQ=255)

                               atatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGa                                                          >  2:3142998/1‑93 (MQ=255)

                               atatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGa                                                          >  2:2021706/1‑93 (MQ=255)

                               atatGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGa                                                          >  2:264585/1‑93 (MQ=255)

                                  tGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACAt                                                       <  1:2636323/93‑1 (MQ=255)

                                    cGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCg                                                     >  2:717792/1‑93 (MQ=255)

                                     gTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGc                                                    >  2:1926017/1‑93 (MQ=255)

                                     gTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGc                                                    >  1:5720386/1‑93 (MQ=255)

                                      tttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCt                                                   >  1:5341163/1‑93 (MQ=255)

                                       ttGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTa                                                  >  2:5673308/1‑93 (MQ=255)

                                         gTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTaaa                                                <  1:4743333/93‑1 (MQ=255)

                                          tCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAAc                                               <  1:3172836/93‑1 (MQ=255)

                                          tCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAAc                                               >  2:4565692/1‑93 (MQ=255)

                                           cGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACg                                              >  2:5994148/1‑93 (MQ=255)

                                            gAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGt                                             >  1:3099349/1‑93 (MQ=255)

                                            gAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGt                                             <  1:6104743/93‑1 (MQ=255)

                                            gAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGt                                             >  2:4976040/1‑93 (MQ=255)

                                             aaaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTc                                            >  1:856699/1‑93 (MQ=255)

                                             aaaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTc                                            <  1:3793405/93‑1 (MQ=255)

                                              aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           <  1:515865/93‑1 (MQ=255)

                                              aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           <  2:5854300/93‑1 (MQ=255)

                                              aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           >  2:5767057/1‑93 (MQ=255)

                                              aaaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCa                                           <  2:3996036/93‑1 (MQ=255)

                                               aaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAg                                          <  2:185541/93‑1 (MQ=255)

                                               aaaCAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAg                                          >  2:1921297/1‑93 (MQ=255)

                                               aaaCAACTGTTGACAGGCAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGACAGTACCCGACGCGACATCGCTAAACGTCAg                                          >  1:3555921/1‑93 (MQ=255)

                                                aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         <  2:4279383/93‑1 (MQ=255)

                                                aacaacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgg                                         <  2:3055370/93‑1 (MQ=255)

                                                  caacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgggg                                       >  1:1529811/1‑93 (MQ=255)

                                                  caacTGGTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAgggg                                       <  1:6251374/93‑1 (MQ=255)

                                                   aacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggggg                                      >  1:5357732/1‑93 (MQ=255)

                                                   aacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggggg                                      >  2:6287210/1‑93 (MQ=255)

                                                   aacTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAggggg                                      >  2:2922958/1‑93 (MQ=255)

                                                    acTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTAACCGCAGCGACATCGCTAAACGTCAAGGGGa                                     >  2:5191171/1‑93 (MQ=255)

                                                     cTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGaa                                    >  1:4412839/1‑93 (MQ=255)

                                                      tGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAAc                                   >  1:4492260/1‑93 (MQ=255)

                                                           aCAGGTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgcg                              <  1:6243197/93‑1 (MQ=255)

                                                              ggTAGCAGTAATGTTCTGTCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  2:5507072/93‑1 (MQ=255)

                                                              ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGgcgacg                           >  2:4476737/1‑90 (MQ=255)

                                                              ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  1:5597631/93‑1 (MQ=255)

                                                              ggTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAg                           <  1:766496/93‑1 (MQ=255)

                                                               gTAGCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAgg                          <  2:6172643/93‑1 (MQ=255)

                                                                  gCAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGa                       >  2:1393830/1‑93 (MQ=255)

                                                                   cAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaa                      <  2:3407023/93‑1 (MQ=255)

                                                                   cAGTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaa                      <  2:4497870/93‑1 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaata                    >  1:4917869/1‑93 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaata                    <  1:13810/93‑1 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaata                    >  2:859392/1‑93 (MQ=255)

                                                                     gTAATGTTCTGGCGCTGGAACGGGCTCGCGGGGAGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGGGaata                    >  1:4160853/1‑93 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   >  1:3417697/1‑93 (MQ=255)

                                                                      tAATGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataa                   >  2:3561842/1‑93 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataat                  >  2:3192091/1‑93 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGaataat                  >  1:5447217/1‑93 (MQ=255)

                                                                       aaTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCCCAGGCGaataat                  <  1:3408920/93‑1 (MQ=255)

                                                                        aTGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATg                 >  2:1605478/1‑93 (MQ=255)

                                                                         tGTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGc                <  2:3797446/93‑1 (MQ=255)

                                                                          gTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCCGGCGAATAATGCa               >  1:1004044/1‑93 (MQ=255)

                                                                          gTTCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCa               >  1:1330613/1‑93 (MQ=255)

                                                                           ttCTGGCGCTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCAt              <  1:2836254/93‑1 (MQ=255)

                                                                                gcgcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCaa         <  2:1458242/93‑1 (MQ=255)

                                                                                gcgcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCaa         <  1:4062215/93‑1 (MQ=255)

                                                                                 cgcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAAc        <  2:3278131/93‑1 (MQ=255)

                                                                                  gcTGGAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACt       >  1:1831698/1‑93 (MQ=255)

                                                                                     ggAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGtt    >  2:1057813/1‑93 (MQ=255)

                                                                                      gAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTg   >  2:5254882/1‑93 (MQ=255)

                                                                                      gAACGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTg   >  2:5145185/1‑93 (MQ=255)

                                                                                       aaCGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGc  <  1:6189122/93‑1 (MQ=255)

                                                                                       aaCGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGc  <  2:124319/93‑1 (MQ=255)

                                                                                       aaCGGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGc  >  2:465855/1‑93 (MQ=255)

CCGAAGAAACGCTGCGTAATTATCAGCAGTCATATGCGTTTGTCGAAAAACAACTGTTGACAGGTAGCAGTAATGTTCTGGCGCTGGAACAGGCTCGCGGGGTGATAGAAAGTACCCGCAGCGACATCGCTAAACGTCAGGGGGAACTGGCGCAGGCGAATAATGCATTGCAACTGTTGC  >  NC_000913/595379‑595558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 19 ≤` `ATCG/ATCG` `< 28 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`