BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	672,914	C→T	G365S (GGC→AGC)	leuS ←	leucine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	672,914	0	C	T	100.0%	736.7 / NA	198	G365S (GGC→AGC)	leuS	leucine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (86/112); total (86/112)

Only 100 of 201 total aligned reads displayed.

CCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCCGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAA  >  NC_000913/672824‑673003

    ttCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGc                                                                                     <  1:5032079/93‑1 (MQ=255)

    ttCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGc                                                                                     <  2:2754971/93‑1 (MQ=255)

      cATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTg                                                                                   <  2:2004093/93‑1 (MQ=255)

       aTGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGc                                                                                  >  2:2552088/1‑93 (MQ=255)

         ggTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCa                                                                                <  2:2351840/93‑1 (MQ=255)

         ggTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCa                                                                                >  1:3853542/1‑93 (MQ=255)

          gTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAg                                                                               <  2:569228/93‑1 (MQ=255)

            cAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGa                                                                             <  1:783008/93‑1 (MQ=255)

            cAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGa                                                                             <  2:2085256/93‑1 (MQ=255)

             aaGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGAt                                                                            <  1:3475702/93‑1 (MQ=255)

              aGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCCGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATa                                                                           >  1:4428239/1‑93 (MQ=255)

               gACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATaa                                                                          >  1:4937383/1‑93 (MQ=255)

                aCCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAAc                                                                         <  1:2295197/93‑1 (MQ=255)

                 ccGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAAcc                                                                        >  2:1106207/1‑93 (MQ=255)

                 ccGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAAcc                                                                        >  2:1254893/1‑93 (MQ=255)

                   gTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCgg                                                                      <  2:3618542/93‑1 (MQ=255)

                   gTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCgg                                                                      >  2:3861905/1‑93 (MQ=255)

                   gTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCgg                                                                      >  2:5019516/1‑93 (MQ=255)

                      gAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGttt                                                                   <  1:4911830/93‑1 (MQ=255)

                      gAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGttt                                                                   <  1:4599354/93‑1 (MQ=255)

                      gAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGttt                                                                   >  1:877113/1‑93 (MQ=255)

                       aaCTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTg                                                                  >  2:4238739/1‑93 (MQ=255)

                        aCTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGa                                                                 <  2:4383889/93‑1 (MQ=255)

                         cTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGAt                                                                <  2:1742678/93‑1 (MQ=255)

                          tCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATg                                                               <  1:5701795/93‑1 (MQ=255)

                          tCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATg                                                               <  1:3312627/93‑1 (MQ=255)

                            gCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGtt                                                             >  1:3931535/1‑93 (MQ=255)

                            gCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGtt                                                             <  1:4869360/93‑1 (MQ=255)

                            gCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGtt                                                             <  2:5178431/93‑1 (MQ=255)

                             ccAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTc                                                            >  2:3461219/1‑93 (MQ=255)

                             ccAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTc                                                            >  1:6291725/1‑93 (MQ=255)

                              cAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCATCTGCCAGGATAACCGGTTTGATGTTCa                                                           >  1:2871174/1‑93 (MQ=255)

                              cAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCa                                                           >  1:4175167/1‑93 (MQ=255)

                              cAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCa                                                           <  2:701467/93‑1 (MQ=255)

                              cAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCa                                                           <  2:5632506/93‑1 (MQ=255)

                                gagTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAgg                                                         >  2:5376940/1‑93 (MQ=255)

                                gagTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAgg                                                         <  2:4861757/93‑1 (MQ=255)

                                gagTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAgg                                                         <  1:6277144/93‑1 (MQ=255)

                                   ttGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCg                                                      <  2:5970677/93‑1 (MQ=255)

                                      aaCAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAt                                                   >  2:1341127/1‑93 (MQ=255)

                                       aCAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAtt                                                  <  2:1197318/93‑1 (MQ=255)

                                       aCAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAtt                                                  >  1:744466/1‑93 (MQ=255)

                                       aCAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAtt                                                  >  1:1574878/1‑93 (MQ=255)

                                        cAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAttt                                                 <  1:3409036/93‑1 (MQ=255)

                                        cAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTAttt                                                 <  2:4938819/93‑1 (MQ=255)

                                         aGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTa                                                <  2:3561482/93‑1 (MQ=255)

                                           cACGCCTTTTTCAGTCAGGGCTTGCTGAGCAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTaga                                              <  2:6191455/93‑1 (MQ=255)

                                           cACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTaga                                              <  2:4128695/93‑1 (MQ=255)

                                           cACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTaga                                              <  1:1307846/93‑1 (MQ=255)

                                           cACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTaga                                              <  2:5778633/93‑1 (MQ=255)

                                            aCGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTagag                                             >  1:5197080/1‑93 (MQ=255)

                                            aCGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTagag                                             >  2:2197468/1‑93 (MQ=255)

                                            aCGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTagag                                             <  1:314935/93‑1 (MQ=255)

                                             cGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAgg                                            >  2:5564296/1‑93 (MQ=255)

                                             cGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAgg                                            <  1:4761794/93‑1 (MQ=255)

                                             cGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATATAGAgg                                            <  2:5240108/93‑1 (MQ=255)

                                              gCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGc                                           >  2:2454851/1‑93 (MQ=255)

                                              gCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGc                                           >  2:5905676/1‑93 (MQ=255)

                                              gCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGc                                           <  1:5379841/93‑1 (MQ=255)

                                               ccTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCa                                          >  1:412137/1‑93 (MQ=255)

                                                cTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCaa                                         >  1:605889/1‑93 (MQ=255)

                                                cTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCaa                                         <  1:5149302/93‑1 (MQ=255)

                                                 tttttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCaaa                                        <  1:2101378/93‑1 (MQ=255)

                                                  ttttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAAc                                       <  1:1002679/93‑1 (MQ=255)

                                                  ttttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAAc                                       <  1:6119032/93‑1 (MQ=255)

                                                    ttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTc                                     >  1:3590134/1‑93 (MQ=255)

                                                    ttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTc                                     <  1:929324/93‑1 (MQ=255)

                                                    ttCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTc                                     <  1:2475447/93‑1 (MQ=255)

                                                     tcagtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCg                                    <  1:4371572/93‑1 (MQ=255)

                                                       agtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTa                                  >  1:2500480/1‑93 (MQ=255)

                                                       agtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTa                                  <  2:3441521/93‑1 (MQ=255)

                                                       agtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTa                                  <  1:184509/93‑1 (MQ=255)

                                                       agtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTa                                  <  1:3560550/93‑1 (MQ=255)

                                                        gtcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAg                                 <  2:8174/93‑1 (MQ=255)

                                                         tcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGt                                <  2:1376644/93‑1 (MQ=255)

                                                         tcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGt                                <  1:1993916/93‑1 (MQ=255)

                                                         tcagGGCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGt                                <  2:3996048/93‑1 (MQ=255)

                                                            gggCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTcgc                             >  2:6080850/1‑93 (MQ=255)

                                                              gCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCgcgc                           <  2:6218813/93‑1 (MQ=255)

                                                              gCTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGGTCAGGCCGTATTTAGAGGCAAACTCGTAGACgcgc                           >  2:5543630/1‑93 (MQ=255)

                                                               cTTGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCt                          <  2:735247/93‑1 (MQ=255)

                                                                ttGCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTg                         <  1:4998021/93‑1 (MQ=255)

                                                                  gCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGt                       <  2:2822634/93‑1 (MQ=255)

                                                                  gCTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAAATCGTAGTCGCGCTggc                       >  1:1261578/1‑92 (MQ=255)

                                                                   cTGAGAAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTc                      <  2:4116180/93‑1 (MQ=255)

                                                                     gagaAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGt                    >  2:1541942/1‑93 (MQ=255)

                                                                     gagaAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGt                    <  2:921516/93‑1 (MQ=255)

                                                                       gaAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGc                  >  2:5103720/1‑93 (MQ=255)

                                                                       gaAAGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGc                  >  1:1628142/1‑93 (MQ=255)

                                                                        aaaGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGcc                 >  1:5079369/1‑93 (MQ=255)

                                                                         aaGATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGccc                <  1:686368/93‑1 (MQ=255)

                                                                           gATCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCg              <  1:2747044/93‑1 (MQ=255)

                                                                             tCTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGt            <  2:4605009/93‑1 (MQ=255)

                                                                              cTGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTa           <  1:6208465/93‑1 (MQ=255)

                                                                               tGGCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTAc          <  2:3307371/93‑1 (MQ=255)

                                                                                 gCTCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCg        >  1:2188944/1‑93 (MQ=255)

                                                                                   tCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGcc      >  2:4219265/1‑93 (MQ=255)

                                                                                   tCAGAGCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGcc      >  1:1745338/1‑93 (MQ=255)

                                                                                      gagCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATa   <  2:3166016/93‑1 (MQ=255)

                                                                                       agCTGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATaa  >  2:3774989/1‑93 (MQ=255)

CCGCTTCATGGTCAAGACCGTTGAACTCGCCAGAGTTGAACAGCACGCCTTTTTCAGTCAGGGCTTGCTGAGAAAGATCTGGCTCAGAGCCGTCAGCTGCCAGGATAACCGGTTTGATGTTCAGGCCGTATTTAGAGGCAAACTCGTAGTCGCGCTGGTCGTGCCCCGGTACCGCCATAA  >  NC_000913/672824‑673003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 35 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`