BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	673,104	T→C	K301K (AAA→AAG)	leuS ←	leucine tRNA synthetase

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	673,104	0	T	C	100.0%	717.1 / NA	225	K301K (AAA→AAG)	leuS	leucine tRNA synthetase
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (128/97); total (128/97)

Only 100 of 239 total aligned reads displayed.

GCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCTTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGC  >  NC_000913/673014‑673193

gCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCctt                                                                                         >  1:2691675/1‑93 (MQ=255)

 ccGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCcttt                                                                                        <  2:4665677/93‑1 (MQ=255)

    tACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtc                                                                                     >  1:4353943/1‑93 (MQ=255)

     aCTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtct                                                                                    <  2:1304699/93‑1 (MQ=255)

     aCTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtct                                                                                    <  2:1587261/93‑1 (MQ=255)

      cTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtctc                                                                                   >  1:3753649/1‑93 (MQ=255)

      cTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTtctc                                                                                   >  2:4654523/1‑93 (MQ=255)

       tCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTcc                                                                                  <  1:3570318/93‑1 (MQ=255)

        ccATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCa                                                                                 <  2:691434/93‑1 (MQ=255)

        ccATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCa                                                                                 <  2:3404119/93‑1 (MQ=255)

         cATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAt                                                                                <  1:1106207/93‑1 (MQ=255)

         cATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAt                                                                                <  1:4118151/93‑1 (MQ=255)

          aTCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAtc                                                                               >  2:1885529/1‑93 (MQ=255)

           tCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAtcg                                                                              <  1:2454851/93‑1 (MQ=255)

             aaTACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCAtcgtc                                                                            <  2:3498999/93‑1 (MQ=255)

               tccGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGc                                                                          <  1:2552088/91‑1 (MQ=255)

               tACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGc                                                                          >  1:1457608/1‑93 (MQ=255)

                aCGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGcc                                                                         <  1:1090648/93‑1 (MQ=255)

                  gAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCAt                                                                       >  2:4477660/1‑93 (MQ=255)

                  gAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCAt                                                                       >  1:4091528/1‑93 (MQ=255)

                   aaGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCAtt                                                                      >  2:876725/1‑93 (MQ=255)

                      tttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCa                                                                   >  1:3156245/1‑93 (MQ=255)

                      tttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCa                                                                   <  2:3913402/93‑1 (MQ=255)

                      tttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCa                                                                   <  2:1745338/93‑1 (MQ=255)

                      tttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCa                                                                   >  1:5623397/1‑93 (MQ=255)

                       ttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAg                                                                  >  1:1175791/1‑93 (MQ=255)

                       ttGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAg                                                                  >  1:273904/1‑93 (MQ=255)

                           tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc                                                              <  1:6231591/93‑1 (MQ=255)

                           tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc                                                              >  2:4008936/1‑93 (MQ=255)

                           tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc                                                              >  1:1734990/1‑93 (MQ=255)

                           tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc                                                              <  2:5197080/93‑1 (MQ=255)

                           tgcCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTc                                                              >  1:517088/1‑93 (MQ=255)

                            gcCCAAACGGTAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCg                                                             <  2:2055358/93‑1 (MQ=255)

                             cccAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCgg                                                            >  1:4722202/1‑93 (MQ=255)

                              ccAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGc                                                           >  2:2229701/1‑93 (MQ=255)

                               cAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCa                                                          >  1:2217513/1‑93 (MQ=255)

                                aaaCGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCac                                                         >  1:1884123/1‑92 (MQ=255)

                                  aCGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACt                                                       >  1:1485665/1‑93 (MQ=255)

                                    gggAATTTCTTCGCCCGTTTATGGGTGAACCGCTTTAAAGCGAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACttt                                                     >  2:6114611/1‑93 (MQ=255)

                                    gggAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACttt                                                     >  2:3582440/1‑93 (MQ=255)

                                    gggAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACttt                                                     >  2:5626818/1‑93 (MQ=255)

                                      gAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTgg                                                   >  1:5643439/1‑93 (MQ=255)

                                        aTTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGgtg                                                 >  2:367571/1‑93 (MQ=255)

                                         tttCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGgtgt                                                >  1:1945494/1‑93 (MQ=255)

                                          ttcttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGtt                                               >  2:150591/1‑93 (MQ=255)

                                          ttcttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGtt                                               >  2:4466193/1‑93 (MQ=255)

                                           tcttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTa                                              >  2:3746720/1‑93 (MQ=255)

                                           tcttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTa                                              >  2:1183900/1‑93 (MQ=255)

                                            cttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTAc                                             >  1:1415356/1‑93 (MQ=255)

                                             ttcGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACg                                            <  2:5829865/93‑1 (MQ=255)

                                             ttcGCCCGGTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACg                                            >  2:6162573/1‑93 (MQ=255)

                                                gCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCa                                         <  1:3846088/93‑1 (MQ=255)

                                                gCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCa                                         >  2:6238452/1‑93 (MQ=255)

                                                gCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCa                                         >  1:3328439/1‑93 (MQ=255)

                                                gCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCa                                         >  1:5045797/1‑93 (MQ=255)

                                                 cccGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCAt                                        <  2:2678779/93‑1 (MQ=255)

                                                  ccGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCAtt                                       >  1:2623972/1‑93 (MQ=255)

                                                  ccGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCAtt                                       >  2:3554387/1‑93 (MQ=255)

                                                    gTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCg                                     <  1:3743131/93‑1 (MQ=255)

                                                    gTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCg                                     <  1:3554409/93‑1 (MQ=255)

                                                    gTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCg                                     >  2:3015951/1‑93 (MQ=255)

                                                    gTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCg                                     <  1:4807007/93‑1 (MQ=255)

                                                     ttAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGt                                    <  2:273045/93‑1 (MQ=255)

                                                         tGGGTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAAt                                >  2:199711/1‑93 (MQ=255)

                                                            gTGAACCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATaaa                             <  1:632071/93‑1 (MQ=255)

                                                              taaCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAgg                           <  2:4937383/92‑1 (MQ=255)

                                                               aaCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgc                          <  1:6218319/93‑1 (MQ=255)

                                                               aaCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCAGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgc                          <  2:6047527/93‑1 (MQ=255)

                                                                aCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgcc                         >  1:2285444/1‑93 (MQ=255)

                                                                aCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgcc                         >  1:3888207/1‑93 (MQ=255)

                                                                aCCGCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgcc                         >  1:782950/1‑93 (MQ=255)

                                                                   gCTTTAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGgccgcc                      >  1:1308351/1‑93 (MQ=255)

                                                                     tttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAg                    >  2:5396187/1‑93 (MQ=255)

                                                                     tttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAg                    >  1:2904078/1‑93 (MQ=255)

                                                                     tttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAg                    >  1:4942156/1‑93 (MQ=255)

                                                                     tttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAg                    >  2:1330666/1‑93 (MQ=255)

                                                                      ttAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGt                   <  1:5376940/93‑1 (MQ=255)

                                                                       tAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGtt                  <  1:4612020/93‑1 (MQ=255)

                                                                       tAAAGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGtt                  >  1:2156741/1‑93 (MQ=255)

                                                                        aaaGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTc                 >  2:3303690/1‑93 (MQ=255)

                                                                        aaaGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTc                 <  2:5087658/93‑1 (MQ=255)

                                                                        aaaGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCCGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTc                 >  1:3225683/1‑93 (MQ=255)

                                                                        aaaGCCAGTATCGACGCCCTTTTT‑TCCATCGTCGCCATTTCAGCTTCGGCAACCTTGGTGTTACGGCCTTCGTCAATAAAAGCCGCCCGTTCa                >  2:5902182/1‑93 (MQ=255)

                                                                         aaGCCAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCa                <  2:4181573/93‑1 (MQ=255)

                                                                             cAGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGat            <  2:1853318/93‑1 (MQ=255)

                                                                              aGTATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGatt           >  1:4733741/1‑93 (MQ=255)

                                                                                tATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGattat         >  1:3656642/1‑93 (MQ=255)

                                                                                tATCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAAGCCGCCAGTTCAGGattat         >  2:2885102/1‑93 (MQ=255)

                                                                                  tCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAttt       >  1:4075238/1‑93 (MQ=255)

                                                                                  tCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAttt       >  1:5916923/1‑93 (MQ=255)

                                                                                  tCGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAttt       >  1:4863919/1‑93 (MQ=255)

                                                                                   cGACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTAtttt      <  2:412137/93‑1 (MQ=255)

                                                                                    gACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTc     <  1:5567462/93‑1 (MQ=255)

                                                                                    gACGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTc     <  1:5814437/93‑1 (MQ=255)

                                                                                     aCGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTcc    <  2:314697/93‑1 (MQ=255)

                                                                                      cGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTccg   >  2:5377407/1‑93 (MQ=255)

                                                                                      cGCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTccg   <  2:6178840/93‑1 (MQ=255)

                                                                                       gCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTccgc  >  1:616234/1‑93 (MQ=255)

                                                                                       gCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTccgc  >  1:2835556/1‑93 (MQ=255)

                                                                                       gCCCTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGACCGCCAGTTCAGGATTATTTTccgc  <  1:1296302/93‑1 (MQ=255)

GCCGTACTCCATCAATACGAAGTTTGCTGCCCAAACGGGAATTTCTTCGCCCGTTAATGGGTGAACCGCTTTAAAGCCAGTATCGACGCCTTTTTTCTCCATCGTCGCCATTTCAGCTTCGGCAACTTTGGTGTTACGGCATTCGTCAATAAAGGCCGCCAGTTCAGGATTATTTTCCGC  >  NC_000913/673014‑673193

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 24 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`