BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	747,952	A→G	V85A (GTA→GCA)	ybgO ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	747,952	0	A	G	100.0%	740.3 / NA	230	V85A (GTA→GCA)	ybgO	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (114/116); total (114/116)

Only 100 of 235 total aligned reads displayed.

CGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATC  >  NC_000913/747862‑748041

  aCTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCa                                                                                       <  1:6178505/93‑1 (MQ=255)

   cTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAg                                                                                      <  1:3571210/93‑1 (MQ=255)

    tttttCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAgg                                                                                     >  1:2106364/1‑93 (MQ=255)

      tttCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCg                                                                                   >  2:5996728/1‑93 (MQ=255)

      tttCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCg                                                                                   >  1:885243/1‑93 (MQ=255)

       ttCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGt                                                                                  >  1:6109655/1‑93 (MQ=255)

         cccAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAg                                                                                >  1:4274264/1‑93 (MQ=255)

         cccAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAg                                                                                <  2:3555632/93‑1 (MQ=255)

             gACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACAt                                                                            >  1:1042491/1‑93 (MQ=255)

             gACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGGTTGCCCAGGCGGAGACAt                                                                            >  2:4662806/1‑93 (MQ=255)

               cTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGc                                                                          <  2:3960434/93‑1 (MQ=255)

                 ggCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTc                                                                        >  2:710370/1‑93 (MQ=255)

                   cATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGc                                                                      <  1:3699437/93‑1 (MQ=255)

                    aTCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCt                                                                     <  1:597843/93‑1 (MQ=255)

                    aTCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCt                                                                     >  2:5025203/1‑93 (MQ=255)

                    aTCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCt                                                                     <  1:6272082/93‑1 (MQ=255)

                     tCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCtt                                                                    >  1:433852/1‑93 (MQ=255)

                      cGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCttt                                                                   >  2:3864117/1‑93 (MQ=255)

                        tAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCa                                                                 >  1:3112853/1‑93 (MQ=255)

                        tAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCa                                                                 <  2:3747333/93‑1 (MQ=255)

                         aaTCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCaa                                                                >  2:5054906/1‑93 (MQ=255)

                           tCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAg                                                              <  1:5737348/93‑1 (MQ=255)

                             gACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGtt                                                            >  1:3759754/1‑93 (MQ=255)

                                acCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGcc                                                         <  2:3622285/93‑1 (MQ=255)

                                acCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGcc                                                         >  2:1787511/1‑93 (MQ=255)

                                acCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGcc                                                         >  1:1770386/1‑93 (MQ=255)

                                acCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGcc                                                         >  2:584518/1‑93 (MQ=255)

                                   gTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGtt                                                      >  2:2329427/1‑93 (MQ=255)

                                    ttGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTg                                                     >  1:2724883/1‑93 (MQ=255)

                                    ttGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTg                                                     <  1:5294740/93‑1 (MQ=255)

                                     tGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTgg                                                    >  2:1682587/1‑93 (MQ=255)

                                     tGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTgg                                                    <  1:1656324/93‑1 (MQ=255)

                                      gTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGt                                                   <  2:4461008/93‑1 (MQ=255)

                                      gTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGt                                                   <  2:4533749/93‑1 (MQ=255)

                                       tATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTa                                                  >  1:4167723/1‑93 (MQ=255)

                                        aTGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTAt                                                 <  1:4007291/93‑1 (MQ=255)

                                            cACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTAttgtt                                             <  2:4882462/93‑1 (MQ=255)

                                            cACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTAttgtt                                             <  2:2875753/93‑1 (MQ=255)

                                             aCGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTAttgttg                                            >  1:3439788/1‑93 (MQ=255)

                                              cGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATtgttgt                                           >  2:6273354/1‑93 (MQ=255)

                                                ccGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTca                                         <  1:2135466/93‑1 (MQ=255)

                                                 cGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTcac                                        >  2:1576459/1‑93 (MQ=255)

                                                  gAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTcaca                                       >  2:4419653/1‑93 (MQ=255)

                                                  gAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTcaca                                       >  2:3690243/1‑93 (MQ=255)

                                                   aGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACaa                                      <  1:1844492/93‑1 (MQ=255)

                                                     ttGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATa                                    <  2:5283260/93‑1 (MQ=255)

                                                      tGATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAg                                   <  2:258969/93‑1 (MQ=255)

                                                       gATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGa                                  <  2:5919030/93‑1 (MQ=255)

                                                       gATAATAACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGa                                  <  1:5232950/93‑1 (MQ=255)

                                                        ataataACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGAc                                 >  2:3391725/1‑93 (MQ=255)

                                                        ataataACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGAc                                 <  2:3245821/93‑1 (MQ=255)

                                                        ataataACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGAc                                 >  2:4005238/1‑93 (MQ=255)

                                                        ataataACGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGAc                                 >  2:2229561/1‑93 (MQ=255)

                                                           ataaCGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACggg                              <  2:6211586/93‑1 (MQ=255)

                                                             aaCGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGaa                            <  1:4665204/93‑1 (MQ=255)

                                                             aaCGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGaa                            >  1:2961613/1‑93 (MQ=255)

                                                              aCGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAAt                           <  2:2841776/93‑1 (MQ=255)

                                                              aCGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAAt                           <  1:5815778/93‑1 (MQ=255)

                                                              aCGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAAt                           <  2:522055/93‑1 (MQ=255)

                                                               cGATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAAtt                          >  2:2200521/1‑93 (MQ=255)

                                                                gATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAAttt                         >  2:5740263/1‑93 (MQ=255)

                                                                gATCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGCAAttt                         >  1:4989700/1‑93 (MQ=255)

                                                                 aTCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAAtttt                        <  2:200693/93‑1 (MQ=255)

                                                                 aTCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAAtttt                        <  2:2632479/93‑1 (MQ=255)

                                                                 aTCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAAtttt                        >  2:1652273/1‑93 (MQ=255)

                                                                  tCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTa                       >  2:3903455/1‑93 (MQ=255)

                                                                  tCCTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTa                       >  2:6253690/1‑93 (MQ=255)

                                                                    cTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAat                     >  1:1170341/1‑93 (MQ=255)

                                                                    cTGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAat                     >  2:2420346/1‑93 (MQ=255)

                                                                     tGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAata                    >  1:5423560/1‑93 (MQ=255)

                                                                     tGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAata                    <  2:4368492/93‑1 (MQ=255)

                                                                     tGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAata                    >  2:5085118/1‑93 (MQ=255)

                                                                     tGCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGGCACAATAGACGGGAATTTTAata                    >  2:4576798/1‑93 (MQ=255)

                                                                      gCACCCCCGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAatat                   <  1:1364349/93‑1 (MQ=255)

                                                                          ccccGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTc               <  2:4546994/93‑1 (MQ=255)

                                                                           cccGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCa              <  2:3016867/93‑1 (MQ=255)

                                                                            ccGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAg             >  2:6069196/1‑93 (MQ=255)

                                                                            ccGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAg             <  1:3987926/93‑1 (MQ=255)

                                                                            ccGGATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAg             <  1:52521/93‑1 (MQ=255)

                                                                             cGGATAGGGGTTGGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGa            <  1:1453618/93‑1 (MQ=255)

                                                                              ggATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGAt           >  2:3288863/1‑93 (MQ=255)

                                                                              ggATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGAt           >  1:5602145/1‑93 (MQ=255)

                                                                               gATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGAtt          >  2:1415351/1‑93 (MQ=255)

                                                                               gATAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGAtt          <  1:2533292/93‑1 (MQ=255)

                                                                                aTAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTc         <  1:4759268/93‑1 (MQ=255)

                                                                                aTAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTc         <  1:2909138/93‑1 (MQ=255)

                                                                                aTAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTc         >  2:1013540/1‑93 (MQ=255)

                                                                                 tAGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTcc        >  1:5342127/1‑93 (MQ=255)

                                                                                  aGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTccc       >  2:478621/1‑93 (MQ=255)

                                                                                  aGGGGTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTccc       <  2:2415539/93‑1 (MQ=255)

                                                                                   ggggTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCa      <  1:5100069/93‑1 (MQ=255)

                                                                                   ggggTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCa      >  2:5684114/1‑93 (MQ=255)

                                                                                   ggggTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCa      >  1:3351452/1‑93 (MQ=255)

                                                                                   ggggTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCa      >  1:2454519/1‑93 (MQ=255)

                                                                                   ggggTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCa      >  2:379148/1‑93 (MQ=255)

                                                                                    gggTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAg     <  1:672630/93‑1 (MQ=255)

                                                                                    gggTTTGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAg     <  2:3039822/93‑1 (MQ=255)

                                                                                      gTTTGCCCAGGCGTAGACATGCTCACTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGAt   <  2:1932854/93‑1 (MQ=255)

                                                                                       tttGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATc  >  1:406013/1‑93 (MQ=255)

                                                                                       tttGCCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATc  <  2:659/93‑1 (MQ=255)

CGACTTTTTCCCAGACTGGCATCGTAATCGACACCGTTGTATGTCACGCCGAGTTGATAATAACGATCCTGCACCCCCGGATAGGGGTTTACCCAGGCGTAGACATGCTCGCTTTCAAAGTTGCCGTTGGTATTGTTGTCACAATAGACGGGAATTTTAATATCGTCAGATTCCCAGATC  >  NC_000913/747862‑748041

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 23 ≤` `ATCG/ATCG` `< 30 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`