BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	NC_000913	927,456	T→C	K321K (AAA→AAG)	cydC ←	ATP‑binding component of cytochrome‑related transport

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_000913	927,456	0	T	C	100.0%	703.1 / NA	216	K321K (AAA→AAG)	cydC	ATP‑binding component of cytochrome‑related transport
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (108/108); total (108/108)

Only 100 of 224 total aligned reads displayed.

TTGCTCCGGATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGTTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGCTTC  >  NC_000913/927366‑927545

 tGCTCCGGATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGcttt                                                                                        <  1:2567704/93‑1 (MQ=255)

   cTCCGGATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTg                                                                                      >  2:1533804/1‑93 (MQ=255)

   cTCCGGATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTg                                                                                      >  2:6042408/1‑93 (MQ=255)

   cTCCGGATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTg                                                                                      >  2:399289/1‑93 (MQ=255)

   cTCCGGATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTg                                                                                      <  1:5071385/93‑1 (MQ=255)

    tCCGGATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGa                                                                                     <  2:5095038/93‑1 (MQ=255)

       ggATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATcc                                                                                  >  1:319247/1‑93 (MQ=255)

        gATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCg                                                                                 >  1:2684278/1‑93 (MQ=255)

           aaGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTa                                                                              <  1:3527708/93‑1 (MQ=255)

             atgaactgaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAg                                                                            <  1:5632955/92‑1 (MQ=255)

              tgaactgaacATCCCGTAACGTCAGCGAAACGCGATCGGCATCACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGt                                                                           <  2:2903871/93‑1 (MQ=255)

                aactgaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCa                                                                         >  2:5329191/1‑93 (MQ=255)

                aactgaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCa                                                                         <  1:2380894/93‑1 (MQ=255)

                 actgaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCag                                                                        >  1:4867119/1‑93 (MQ=255)

                  ctgaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCaga                                                                       <  1:89396/93‑1 (MQ=255)

                  ctgaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCaga                                                                       <  2:1122224/93‑1 (MQ=255)

                  cggaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCaga                                                                       <  1:326500/91‑1 (MQ=255)

                   tgaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACATGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCagag                                                                      >  1:6157889/1‑93 (MQ=255)

                    gaacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAgaga                                                                     <  2:2516786/93‑1 (MQ=255)

                     aacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAt                                                                    >  2:2621178/1‑93 (MQ=255)

                     aacATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAt                                                                    >  1:993348/1‑93 (MQ=255)

                      acATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAta                                                                   <  1:4337448/93‑1 (MQ=255)

                        aTCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAtacg                                                                 >  1:1053026/1‑93 (MQ=255)

                        aTCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAtacg                                                                 <  2:859577/93‑1 (MQ=255)

                         tCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAtacgt                                                                >  2:607782/1‑93 (MQ=255)

                         tCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAtacgt                                                                >  1:804958/1‑93 (MQ=255)

                         tCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGATATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAtacgt                                                                >  1:4446845/1‑93 (MQ=255)

                          cccGTAATGTCAGCGAAGCGCGATCGGCATCACGAGTTTGGGTATCAGGAAATGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAtacgta                                                               <  1:5959529/93‑1 (MQ=255)

                          cccGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAtacgta                                                               <  1:6014671/93‑1 (MQ=255)

                           ccGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGAtacgtac                                                              >  2:5000855/1‑93 (MQ=255)

                              tAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGc                                                           >  1:3031638/1‑93 (MQ=255)

                              tAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGc                                                           <  2:156298/93‑1 (MQ=255)

                               aaCGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCa                                                          >  2:2020346/1‑93 (MQ=255)

                               aaCGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCa                                                          <  2:4564873/93‑1 (MQ=255)

                                 cggcAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCaga                                                        <  1:1846179/90‑1 (MQ=255)

                                 cGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCaga                                                        <  1:3675607/93‑1 (MQ=255)

                                 cGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCaga                                                        <  1:798123/93‑1 (MQ=255)

                                 cGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCaga                                                        <  1:2431353/93‑1 (MQ=255)

                                 cGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCaga                                                        <  1:3421948/93‑1 (MQ=255)

                                  gTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCagag                                                       >  1:2647607/1‑93 (MQ=255)

                                   tCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAgg                                                      >  2:3180239/1‑93 (MQ=255)

                                    cAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGc                                                     <  1:5171444/93‑1 (MQ=255)

                                      gCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCaa                                                   >  1:451178/1‑93 (MQ=255)

                                      gCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCaa                                                   <  2:2147594/93‑1 (MQ=255)

                                      gCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCaa                                                   <  2:167473/93‑1 (MQ=255)

                                       cGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAAt                                                  <  1:3867715/93‑1 (MQ=255)

                                         aaaCGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGa                                                <  2:4817197/93‑1 (MQ=255)

                                          aaCGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGAc                                               <  1:2788/93‑1 (MQ=255)

                                           aCGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACt                                              <  2:524191/93‑1 (MQ=255)

                                            cgcgATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACtt                                             <  2:5395827/93‑1 (MQ=255)

                                            cgcgATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACtt                                             <  2:6301065/93‑1 (MQ=255)

                                             gcgATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTg                                            >  1:1115549/1‑93 (MQ=255)

                                                 tCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGcccc                                        >  2:6018683/1‑93 (MQ=255)

                                                 tCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGcccc                                        <  1:1528662/93‑1 (MQ=255)

                                                  cGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCa                                       <  2:67314/93‑1 (MQ=255)

                                                   ggCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAg                                      <  2:1880253/93‑1 (MQ=255)

                                                    gCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGa                                     >  1:1820692/1‑93 (MQ=255)

                                                    gCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGa                                     >  2:4492886/1‑93 (MQ=255)

                                                    gCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGa                                     <  2:2316365/93‑1 (MQ=255)

                                                    gCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGa                                     <  1:1197851/93‑1 (MQ=255)

                                                     cAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGAt                                    >  1:5155046/1‑93 (MQ=255)

                                                      aaCACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATg                                   >  2:3075243/1‑93 (MQ=255)

                                                       acacGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGc                                  <  1:5493946/93‑1 (MQ=255)

                                                        cacGAGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCt                                 >  1:1105332/1‑93 (MQ=255)

                                                            aGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGaaa                             <  2:806206/93‑1 (MQ=255)

                                                            aGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGaaa                             <  1:2205312/93‑1 (MQ=255)

                                                            aGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGaaa                             <  1:474870/93‑1 (MQ=255)

                                                            aGTTTGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGaaa                             >  1:5090280/1‑93 (MQ=255)

                                                              tttGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATg                           <  2:4422197/93‑1 (MQ=255)

                                                                tGGGTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCa                         <  2:4579799/93‑1 (MQ=255)

                                                                   gTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCAccc                      <  1:2239931/93‑1 (MQ=255)

                                                                   gTATCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCAccc                      <  2:361268/93‑1 (MQ=255)

                                                                     aTCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGt                    >  1:3934057/1‑93 (MQ=255)

                                                                     aTCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGt                    <  2:4734812/93‑1 (MQ=255)

                                                                      tCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGtt                   <  1:4426190/93‑1 (MQ=255)

                                                                      tCAGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGtt                   >  2:3215184/1‑93 (MQ=255)

                                                                        aGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTAc                 >  2:3841573/1‑93 (MQ=255)

                                                                        aGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTAc                 >  1:4201178/1‑93 (MQ=255)

                                                                        aGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTAc                 >  1:3247337/1‑93 (MQ=255)

                                                                        aGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTAc                 >  1:709946/1‑93 (MQ=255)

                                                                        aGGAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTAc                 >  2:1388694/1‑93 (MQ=255)

                                                                         ggAAAGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACt                >  2:1722452/1‑93 (MQ=255)

                                                                           aaaGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTgg              <  1:2051836/93‑1 (MQ=255)

                                                                            aaGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGt             <  1:2675206/93‑1 (MQ=255)

                                                                             aGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTg            >  2:2762633/1‑93 (MQ=255)

                                                                             aGGTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTg            <  2:2258194/93‑1 (MQ=255)

                                                                              ggTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGc           <  1:3741867/93‑1 (MQ=255)

                                                                               gTGACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGcc          <  2:5167013/93‑1 (MQ=255)

                                                                                 gACCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAg        >  1:3087996/1‑93 (MQ=255)

                                                                                  aCCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGt       <  1:4635075/93‑1 (MQ=255)

                                                                                  aCCTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGt       >  1:5620206/1‑93 (MQ=255)

                                                                                   ccTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTg      >  1:6181520/1‑93 (MQ=255)

                                                                                    cTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGc     >  2:373209/1‑93 (MQ=255)

                                                                                    cTCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGc     <  1:1979368/93‑1 (MQ=255)

                                                                                     tCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGCt    <  2:1822191/93‑1 (MQ=255)

                                                                                     tCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGCt    <  2:3361751/93‑1 (MQ=255)

                                                                                     tCCGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACACGTTACTGGTGCCAGTGCt    >  2:3895429/1‑93 (MQ=255)

                                                                                      ccGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGCtt   >  1:4102064/1‑93 (MQ=255)

                                                                                       cGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGCTTc  >  2:5733005/1‑93 (MQ=255)

                                                                                       cGGCTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGCTTc  <  1:5578625/93‑1 (MQ=255)

TTGCTCCGGATAAGTGAACTGAACATCCCGTAACGTCAGCGAAACGCGATCGGCAACACGAGTTTGGGTATCAGGAAAGGTGACCTCCGGTTTTTGATCCGTTAAGTCAGAGATACGTACGGCAGAGGCAATGACTTGCCCCAGATGCTGAAATGCACCCGTTACTGGTGCCAGTGCTTC  >  NC_000913/927366‑927545

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 29 ≤` `ATCG/ATCG` `< 34 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`