| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 963,286 | A→G | H79R (CAC→CGC) | himD → | integration host factor beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 963,286 | 0 | A | G | 99.6% | 755.2 / NA | 232 | H79R (CAC→CGC) | himD | integration host factor beta subunit |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (112/119); minor base T (0/1); total (112/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 235 total aligned reads displayed.
GCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCTGTCG > NC_000913/963196‑963375 | gCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCt > 2:4132981/1‑93 (MQ=255) aGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCttt > 2:1790052/1‑93 (MQ=255) aGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCttt < 2:428918/93‑1 (MQ=255) aGTGTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCttt < 2:376382/93‑1 (MQ=255) gTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTa > 2:3839431/1‑93 (MQ=255) gTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTa > 2:4172886/1‑93 (MQ=255) tttCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTaa > 2:681702/1‑93 (MQ=255) ttCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTaaa > 1:2994734/1‑93 (MQ=255) tctcTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAAc < 2:2814168/93‑1 (MQ=255) tctcTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAAc < 1:5746552/93‑1 (MQ=255) tctcTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAAc > 2:4601873/1‑93 (MQ=255) ctctTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAAcc < 2:2378240/93‑1 (MQ=255) ctctTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAAcc < 2:5743448/93‑1 (MQ=255) tctTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCt < 1:2404244/93‑1 (MQ=255) tctTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCt > 2:2158920/1‑93 (MQ=255) tctTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCt > 2:3584880/1‑93 (MQ=255) ctTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTg < 1:2481852/93‑1 (MQ=255) tttGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGACAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTgg > 2:4157967/1‑93 (MQ=255) cACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTaaa < 2:4223203/93‑1 (MQ=255) aCTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAg > 1:2913674/1‑93 (MQ=255) tACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGaa < 2:4489456/93‑1 (MQ=255) tACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGaa > 2:4077507/1‑93 (MQ=255) tACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGaa < 1:4971692/93‑1 (MQ=255) aCCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAAc < 1:4885796/93‑1 (MQ=255) ccGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACt < 1:509828/93‑1 (MQ=255) accacGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGa > 1:2882849/1‑93 (MQ=255) ccacGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGAt < 1:3505625/93‑1 (MQ=255) ccacGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGAt < 1:991999/93‑1 (MQ=255) ccacGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGAt < 1:1810762/93‑1 (MQ=255) cacGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATc < 2:5693191/93‑1 (MQ=255) acGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATcg > 1:3639581/1‑93 (MQ=255) tACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCgcgc < 2:614651/93‑1 (MQ=255) cGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCaa < 2:1184280/93‑1 (MQ=255) cGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCaa > 1:4148534/1‑93 (MQ=255) cGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCaa > 1:6132909/1‑93 (MQ=255) gACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAata > 1:480002/1‑93 (MQ=255) gACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAata > 1:4557606/1‑93 (MQ=255) gACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAata > 1:3943183/1‑93 (MQ=255) gACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAata > 2:195689/1‑93 (MQ=255) aCGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAatat < 2:2334470/93‑1 (MQ=255) cGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATAtt < 1:2254946/93‑1 (MQ=255) gTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATAttt > 1:621458/1‑93 (MQ=255) gTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATAttt < 2:3894944/93‑1 (MQ=255) aaTCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTAc < 2:1519711/93‑1 (MQ=255) aaTCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTAc > 2:6238891/1‑93 (MQ=255) aaTCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTAc < 1:1192026/93‑1 (MQ=255) aaTCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATAAGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTAc > 2:910711/1‑93 (MQ=255) tCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACgg < 2:1345929/93‑1 (MQ=255) tCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACgg < 1:1721854/93‑1 (MQ=255) cGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGtt > 2:1097812/1‑93 (MQ=255) cGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGtt > 1:4352777/1‑93 (MQ=255) gAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTa > 1:1243517/1‑93 (MQ=255) aGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAg < 2:4675364/93‑1 (MQ=255) gACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGt > 1:103249/1‑93 (MQ=255) gACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGt < 2:316553/93‑1 (MQ=255) aCTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGtt > 1:3329176/1‑93 (MQ=255) cTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGttt > 1:16576/1‑93 (MQ=255) ggCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGttttt < 1:4216556/93‑1 (MQ=255) aTAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACt < 1:804807/93‑1 (MQ=255) aTAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACt > 1:231876/1‑93 (MQ=255) tAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTc < 1:67223/93‑1 (MQ=255) tAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTc > 2:4104732/1‑93 (MQ=255) tAAAGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTc < 2:5013070/93‑1 (MQ=255) aaaGTAGAACTGGAAGAAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCa < 2:3133793/93‑1 (MQ=255) aGTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCaaa < 1:5682735/93‑1 (MQ=255) gTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAAc > 1:2782633/1‑93 (MQ=255) gTAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAAc > 2:5432509/1‑93 (MQ=255) tAGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACt < 2:2449561/93‑1 (MQ=255) aGAACTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACtt < 2:2993297/93‑1 (MQ=255) aCTGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGaa < 2:1459061/93‑1 (MQ=255) tGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACg > 2:1649288/1‑93 (MQ=255) tGGAAGGAAAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACg > 2:3412539/1‑93 (MQ=255) gaaggaaAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACgag > 1:5772749/1‑93 (MQ=255) aaggaaAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACgaga < 1:4480572/93‑1 (MQ=255) aagaaaAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACgaga < 2:6026710/93‑1 (MQ=255) aggaaAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACgagag > 1:3380974/1‑93 (MQ=255) aggaaAATACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACgagag > 1:5289140/1‑93 (MQ=255) aaaaTACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGaaa < 1:4744643/93‑1 (MQ=255) aaaaTACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGaaa < 1:1358308/93‑1 (MQ=255) aaaaTACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGaaa < 2:4236968/93‑1 (MQ=255) aaaTGCGTTCTTCGCTTTAAACCTGTTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAGGTTTTTTACGCAAACTTGAACGAGAGaaaa < 2:1731467/93‑1 (MQ=255) aaaTACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAGCGAGAGaaaa < 2:3249882/93‑1 (MQ=255) aaaTACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGaaaa < 1:2554245/93‑1 (MQ=255) aaaTACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGaaaa < 1:5597985/93‑1 (MQ=255) aaaTACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGaaaa > 1:5479205/1‑93 (MQ=255) aTACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGc > 1:1433189/1‑93 (MQ=255) tACGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCa > 2:5141718/1‑93 (MQ=255) aCGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCAc > 1:3030804/1‑93 (MQ=255) aCGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCAc < 2:1426003/93‑1 (MQ=255) cGTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCAcc < 1:374580/93‑1 (MQ=255) gTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCt < 1:4648294/93‑1 (MQ=255) gTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCt < 2:586024/93‑1 (MQ=255) gTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCt < 2:5498305/93‑1 (MQ=255) gTTCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCt < 1:1933565/93‑1 (MQ=255) ttCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCTg > 2:3424568/1‑93 (MQ=255) ttCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCTg > 2:4903823/1‑93 (MQ=255) ttCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCTg < 1:531960/93‑1 (MQ=255) tCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCTGt > 2:5576317/1‑93 (MQ=255) tCCTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCTGt < 1:3844268/93‑1 (MQ=255) ccTCGCTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCTGTc < 1:2677365/93‑1 (MQ=255) | GCAGTTTCTCTTTGCACTACCGCGCACCACGTACCGGACGTAATCCGAAGACTGGCGATAAAGTAGAACTGGAAGGAAAATACGTTCCTCACTTTAAACCTGGTAAAGAACTGCGCGATCGCGCCAATATTTACGGTTAAGTTTTTTACTCAAACTTGAACGAGAGAAAAGCACCTGTCG > NC_000913/963196‑963375 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |